RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 HAND1O96004 215 aa12.27□□□□□ -0.45
HOXC11-202ENST00000546378 COX5BP10606 129 aa12.27□□□□□ -0.45
HOXC11-202ENST00000546378 GPR6P46095 362 aaPredicted RBP12.27□□□□□ -0.45
HOXC11-202ENST00000546378 ZNRF1Q8ND25 227 aa12.27□□□□□ -0.45
HOXC11-202ENST00000546378 HSD17B10Q99714 261 aaKnown RBP12.27□□□□□ -0.45
HOXC11-202ENST00000546378 GOLT1BQ9Y3E0 138 aa12.27□□□□□ -0.45
HOXC11-202ENST00000546378 NKX2-8O15522 239 aa12.27□□□□□ -0.45
HOXC11-202ENST00000546378 REG1BP48304 166 aa12.27□□□□□ -0.45
HOXC11-202ENST00000546378 B3GALT5-AS1P59052 145 aa12.27□□□□□ -0.45
HOXC11-202ENST00000546378 TMEM42Q69YG0 159 aa12.27□□□□□ -0.45
HOXC11-202ENST00000546378 ASCL2Q99929 193 aa12.27□□□□□ -0.45
HOXC11-202ENST00000546378 SH3BGRL2Q9UJC5 107 aa12.27□□□□□ -0.45
HOXC11-202ENST00000546378 SPG11Q96JI7 2443 aa12.27□□□□□ -0.45
HOXC11-202ENST00000546378 CREBBPQ92793 2442 aa12.27□□□□□ -0.45
HOXC11-202ENST00000546378 MARCH11A6NNE9 402 aa12.26□□□□□ -0.45
HOXC11-202ENST00000546378 CA11O75493 328 aa12.26□□□□□ -0.45
HOXC11-202ENST00000546378 GPR12P47775 334 aa12.26□□□□□ -0.45
HOXC11-202ENST00000546378 PCP4P48539 62 aa12.26□□□□□ -0.45
HOXC11-202ENST00000546378 CCL11P51671 97 aa12.26□□□□□ -0.45
HOXC11-202ENST00000546378 PMCHL1Q16048 86 aa12.26□□□□□ -0.45
HOXC11-202ENST00000546378 C10orf35Q96D05 121 aa12.26□□□□□ -0.45
HOXC11-202ENST00000546378 LINC00479Q96M42 142 aa12.26□□□□□ -0.45
HOXC11-202ENST00000546378 TMEM147Q9BVK8 224 aa12.26□□□□□ -0.45
HOXC11-202ENST00000546378 COL25A1Q9BXS0 654 aaPredicted RBP12.26□□□□□ -0.45
HOXC11-202ENST00000546378 TNRC6BQ9UPQ9 1833 aaKnown RBP12.26□□□□□ -0.45
HOXC11-202ENST00000546378 ATRXP46100 2492 aa12.26□□□□□ -0.45
HOXC11-202ENST00000546378 TRBV24-1A0A075B6N3 115 aa12.26□□□□□ -0.45
HOXC11-202ENST00000546378 CGAP01215 116 aa12.26□□□□□ -0.45
HOXC11-202ENST00000546378 CD82P27701 267 aa12.26□□□□□ -0.45
HOXC11-202ENST00000546378 MPV17P39210 176 aa12.26□□□□□ -0.45
HOXC11-202ENST00000546378 SPCS3P61009 180 aa12.26□□□□□ -0.45
HOXC11-202ENST00000546378 RPL31P62899 125 aaKnown RBP12.26□□□□□ -0.45
HOXC11-202ENST00000546378 ARSJQ5FYB0 599 aaPredicted RBP12.26□□□□□ -0.45
HOXC11-202ENST00000546378 DCAF10Q5QP82 559 aa12.26□□□□□ -0.45
HOXC11-202ENST00000546378 WDR86Q86TI4 376 aa12.26□□□□□ -0.45
HOXC11-202ENST00000546378 C11orf42Q8N5U0 333 aa12.26□□□□□ -0.45
HOXC11-202ENST00000546378 SIGLECL1Q8N7X8 197 aa12.26□□□□□ -0.45
HOXC11-202ENST00000546378 OR13A1Q8NGR1 328 aa12.26□□□□□ -0.45
HOXC11-202ENST00000546378 C1QTNF5Q9BXJ0 243 aa12.26□□□□□ -0.45
HOXC11-202ENST00000546378 MRPL18Q9H0U6 180 aaKnown RBP12.26□□□□□ -0.45
HOXC11-202ENST00000546378 SEPSECSQ9HD40 501 aaKnown RBP12.26□□□□□ -0.45
HOXC11-202ENST00000546378 BOKQ9UMX3 212 aaPredicted RBP12.26□□□□□ -0.45
HOXC11-202ENST00000546378 NCKAP5O14513 1909 aa12.26□□□□□ -0.45
HOXC11-202ENST00000546378 CUBNO60494 3623 aa12.26□□□□□ -0.45
HOXC11-202ENST00000546378 CD46P15529 392 aa12.26□□□□□ -0.45
HOXC11-202ENST00000546378 CRYBB3P26998 211 aa12.26□□□□□ -0.45
HOXC11-202ENST00000546378 CD1BP29016 333 aa12.26□□□□□ -0.45
HOXC11-202ENST00000546378 OR10G8Q8NGN5 311 aa12.26□□□□□ -0.45
HOXC11-202ENST00000546378 ACY3Q96HD9 319 aa12.26□□□□□ -0.45
HOXC11-202ENST00000546378 OR9G9P0C7N8 305 aa12.25□□□□□ -0.45
HOXC11-202ENST00000546378 PSG5Q15238 335 aa12.25□□□□□ -0.45
HOXC11-202ENST00000546378 LINC01551Q86U37 167 aa12.25□□□□□ -0.45
HOXC11-202ENST00000546378 OR2Z1Q8NG97 314 aa12.25□□□□□ -0.45
HOXC11-202ENST00000546378 ZC2HC1AQ96GY0 325 aa12.25□□□□□ -0.45
HOXC11-202ENST00000546378 C11orf1Q9H5F2 150 aa12.25□□□□□ -0.45
HOXC11-202ENST00000546378 LRRC30A6NM36 301 aa12.25□□□□□ -0.45
HOXC11-202ENST00000546378 M0QZ24 198 aa12.25□□□□□ -0.45
HOXC11-202ENST00000546378 SNAI2O43623 268 aa12.25□□□□□ -0.45
HOXC11-202ENST00000546378 HOXC12P31275 282 aa12.25□□□□□ -0.45
HOXC11-202ENST00000546378 CATR1Q13166 79 aa12.25□□□□□ -0.45
HOXC11-202ENST00000546378 ACOT6Q3I5F7 207 aaPredicted RBP12.25□□□□□ -0.45
HOXC11-202ENST00000546378 Q6ZN92 141 aa12.25□□□□□ -0.45
HOXC11-202ENST00000546378 PQLC2Q6ZP29 291 aa12.25□□□□□ -0.45
HOXC11-202ENST00000546378 RTL8AQ9BWD3 113 aa12.25□□□□□ -0.45
HOXC11-202ENST00000546378 SSBP4Q9BWG4 385 aaPredicted RBP12.25□□□□□ -0.45
HOXC11-202ENST00000546378 ZNF391Q9UJN7 358 aa12.25□□□□□ -0.45
HOXC11-202ENST00000546378 TRBV20OR9-2A0A075B6H5 130 aa12.24□□□□□ -0.45
HOXC11-202ENST00000546378 ZNF253O75346 499 aa12.24□□□□□ -0.45
HOXC11-202ENST00000546378 TIMP3P35625 211 aa12.24□□□□□ -0.45
HOXC11-202ENST00000546378 SERF2P84101 59 aa12.24□□□□□ -0.45
HOXC11-202ENST00000546378 TMEM251Q8N6I4 163 aa12.24□□□□□ -0.45
HOXC11-202ENST00000546378 SFRP2Q96HF1 295 aa12.24□□□□□ -0.45
HOXC11-202ENST00000546378 PMCHL2Q9BQD1 86 aa12.24□□□□□ -0.45
HOXC11-202ENST00000546378 SIAH2O43255 324 aa12.24□□□□□ -0.45
HOXC11-202ENST00000546378 SUMO1P63165 101 aaKnown RBP12.24□□□□□ -0.45
HOXC11-202ENST00000546378 KRTCAP3Q53RY4 240 aa12.24□□□□□ -0.45
HOXC11-202ENST00000546378 Q56UQ5 140 aa12.24□□□□□ -0.45
HOXC11-202ENST00000546378 KIR3DL3Q8N743 410 aa12.24□□□□□ -0.45
HOXC11-202ENST00000546378 TRIB1Q96RU8 372 aa12.24□□□□□ -0.45
HOXC11-202ENST00000546378 TMEM208Q9BTX3 173 aa12.24□□□□□ -0.45
HOXC11-202ENST00000546378 TPPP3Q9BW30 176 aa12.24□□□□□ -0.45
HOXC11-202ENST00000546378 SMDT1Q9H4I9 107 aa12.24□□□□□ -0.45
HOXC11-202ENST00000546378 ZNF703Q9H7S9 590 aaPredicted RBP12.24□□□□□ -0.45
HOXC11-202ENST00000546378 B4GALT7Q9UBV7 327 aa12.24□□□□□ -0.45
HOXC11-202ENST00000546378 RALYQ9UKM9 306 aaKnown RBP12.24□□□□□ -0.45
HOXC11-202ENST00000546378 PXMP4Q9Y6I8 212 aa12.24□□□□□ -0.45
HOXC11-202ENST00000546378 IGF2RP11717 2491 aa12.24□□□□□ -0.45
HOXC11-202ENST00000546378 IGLV2-14P01704 120 aa12.24□□□□□ -0.45
HOXC11-202ENST00000546378 Q6ZR03 302 aa12.24□□□□□ -0.45
HOXC11-202ENST00000546378 TMEM170AQ8WVE7 144 aa12.24□□□□□ -0.45
HOXC11-202ENST00000546378 SF3B5Q9BWJ5 86 aaKnown RBP12.24□□□□□ -0.45
HOXC11-202ENST00000546378 MS4A5Q9H3V2 200 aa12.24□□□□□ -0.45
HOXC11-202ENST00000546378 PLSCR2Q9NRY7 297 aa12.24□□□□□ -0.45
HOXC11-202ENST00000546378 HCFC1P51610 2035 aa12.23□□□□□ -0.45
HOXC11-202ENST00000546378 OR2M7Q8NG81 312 aa12.23□□□□□ -0.45
HOXC11-202ENST00000546378 CIB3Q96Q77 187 aaPredicted RBP12.23□□□□□ -0.45
HOXC11-202ENST00000546378 TTTY12Q9BZ98 90 aa12.23□□□□□ -0.45
HOXC11-202ENST00000546378 CTDSP1Q9GZU7 261 aa12.23□□□□□ -0.45
HOXC11-202ENST00000546378 LRBAP50851 2863 aa12.23□□□□□ -0.45
HOXC11-202ENST00000546378 IGLV3-32A0A0A0MS00 114 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms