RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 SPIN2BQ9BPZ2 258 aa9.2□□□□□ -0.94
YBX3-217ENST00000546164 PLEKHA2Q9HB19 425 aa9.2□□□□□ -0.94
YBX3-217ENST00000546164 BET1LQ9NYM9 111 aa9.2□□□□□ -0.94
YBX3-217ENST00000546164 MTFP1Q9UDX5 166 aa9.2□□□□□ -0.94
YBX3-217ENST00000546164 SCOCQ9UIL1 159 aa9.2□□□□□ -0.94
YBX3-217ENST00000546164 MSGN1A6NI15 193 aa9.19□□□□□ -0.94
YBX3-217ENST00000546164 RGS5O15539 181 aa9.19□□□□□ -0.94
YBX3-217ENST00000546164 PGLYRP1O75594 196 aaPredicted RBP9.19□□□□□ -0.94
YBX3-217ENST00000546164 HPRT1P00492 218 aa9.19□□□□□ -0.94
YBX3-217ENST00000546164 OR8U8P0C7N1 319 aa9.19□□□□□ -0.94
YBX3-217ENST00000546164 MAS1LP35410 378 aa9.19□□□□□ -0.94
YBX3-217ENST00000546164 UCP3P55916 312 aa9.19□□□□□ -0.94
YBX3-217ENST00000546164 TPPP2P59282 170 aa9.19□□□□□ -0.94
YBX3-217ENST00000546164 TAS2R31P59538 309 aa9.19□□□□□ -0.94
YBX3-217ENST00000546164 AADACL3Q5VUY0 350 aa9.19□□□□□ -0.94
YBX3-217ENST00000546164 LAX1Q8IWV1 398 aa9.19□□□□□ -0.94
YBX3-217ENST00000546164 CMTM1Q8IZ96 169 aa9.19□□□□□ -0.94
YBX3-217ENST00000546164 CADM3Q8N126 398 aa9.19□□□□□ -0.94
YBX3-217ENST00000546164 OR5T1Q8NG75 326 aa9.19□□□□□ -0.94
YBX3-217ENST00000546164 OR4A5Q8NH83 315 aa9.19□□□□□ -0.94
YBX3-217ENST00000546164 CASTOR1Q8WTX7 329 aa9.19□□□□□ -0.94
YBX3-217ENST00000546164 TINAGL1Q9GZM7 467 aaPredicted RBP9.19□□□□□ -0.94
YBX3-217ENST00000546164 SLIRPQ9GZT3 109 aaKnown RBP9.19□□□□□ -0.94
YBX3-217ENST00000546164 COMMD9Q9P000 198 aa9.19□□□□□ -0.94
YBX3-217ENST00000546164 RABL2AQ9UBK7 228 aaPredicted RBP9.19□□□□□ -0.94
YBX3-217ENST00000546164 KLK11Q9UBX7 282 aa9.19□□□□□ -0.94
YBX3-217ENST00000546164 RABL2BQ9UNT1 228 aa9.19□□□□□ -0.94
YBX3-217ENST00000546164 CEPT1Q9Y6K0 416 aa9.19□□□□□ -0.94
YBX3-217ENST00000546164 A0A0G2JLM5 398 aa9.18□□□□□ -0.94
YBX3-217ENST00000546164 GABARAPH6UMI1 98 aa9.18□□□□□ -0.94
YBX3-217ENST00000546164 GPR31O00270 319 aa9.18□□□□□ -0.94
YBX3-217ENST00000546164 TRGV3P03979 118 aa9.18□□□□□ -0.94
YBX3-217ENST00000546164 IL6RP08887 468 aaPredicted RBP9.18□□□□□ -0.94
YBX3-217ENST00000546164 FGF2P09038 288 aa9.18□□□□□ -0.94
YBX3-217ENST00000546164 OR9G9P0C7N8 305 aa9.18□□□□□ -0.94
YBX3-217ENST00000546164 NQO2P16083 231 aa9.18□□□□□ -0.94
YBX3-217ENST00000546164 F2RP25116 425 aa9.18□□□□□ -0.94
YBX3-217ENST00000546164 TSPAN5P62079 268 aa9.18□□□□□ -0.94
YBX3-217ENST00000546164 SSBP1Q04837 148 aaKnown RBP9.18□□□□□ -0.94
YBX3-217ENST00000546164 C10orf55Q5SWW7 151 aa9.18□□□□□ -0.94
YBX3-217ENST00000546164 OR4A47Q6IF82 309 aa9.18□□□□□ -0.94
YBX3-217ENST00000546164 LPCAT3Q6P1A2 487 aa9.18□□□□□ -0.94
YBX3-217ENST00000546164 ARRDC1Q8N5I2 433 aa9.18□□□□□ -0.94
YBX3-217ENST00000546164 ADAD2Q8NCV1 583 aaKnown RBP9.18□□□□□ -0.94
YBX3-217ENST00000546164 OR51H1Q8NH63 302 aa9.18□□□□□ -0.94
YBX3-217ENST00000546164 DPF1Q92782 380 aa9.18□□□□□ -0.94
YBX3-217ENST00000546164 MS4A10Q96PG2 267 aa9.18□□□□□ -0.94
YBX3-217ENST00000546164 OR5B12Q96R08 314 aa9.18□□□□□ -0.94
YBX3-217ENST00000546164 PHB2Q99623 299 aa9.18□□□□□ -0.94
YBX3-217ENST00000546164 RSRP1Q9BUV0 290 aa9.18□□□□□ -0.94
YBX3-217ENST00000546164 NXF2Q9GZY0 626 aaKnown RBP9.18□□□□□ -0.94
YBX3-217ENST00000546164 FAM212BQ9NTI7 297 aaPredicted RBP9.18□□□□□ -0.94
YBX3-217ENST00000546164 TEX22C9J3V5 150 aa9.17□□□□□ -0.94
YBX3-217ENST00000546164 LINC01619G3V211 115 aa9.17□□□□□ -0.94
YBX3-217ENST00000546164 CTDSPLO15194 276 aa9.17□□□□□ -0.94
YBX3-217ENST00000546164 S1PR2O95136 353 aa9.17□□□□□ -0.94
YBX3-217ENST00000546164 CD74P04233 296 aa9.17□□□□□ -0.94
YBX3-217ENST00000546164 RLN1P04808 185 aa9.17□□□□□ -0.94
YBX3-217ENST00000546164 ZNF735P0CB33 412 aa9.17□□□□□ -0.94
YBX3-217ENST00000546164 RAB25P57735 213 aa9.17□□□□□ -0.94
YBX3-217ENST00000546164 RPL8P62917 257 aaKnown RBP9.17□□□□□ -0.94
YBX3-217ENST00000546164 RNASE10Q5GAN6 216 aaKnown RBP9.17□□□□□ -0.94
YBX3-217ENST00000546164 SSX9Q7RTT3 188 aa9.17□□□□□ -0.94
YBX3-217ENST00000546164 LHFPL1Q86WI0 220 aa9.17□□□□□ -0.94
YBX3-217ENST00000546164 SLC38A6Q8IZM9 456 aa9.17□□□□□ -0.94
YBX3-217ENST00000546164 TTC9CQ8N5M4 171 aa9.17□□□□□ -0.94
YBX3-217ENST00000546164 TMEM229BQ8NBD8 167 aa9.17□□□□□ -0.94
YBX3-217ENST00000546164 SMIM4Q8WVI0 70 aa9.17□□□□□ -0.94
YBX3-217ENST00000546164 FCAMRQ8WWV6 532 aa9.17□□□□□ -0.94
YBX3-217ENST00000546164 DGCR14Q96DF8 476 aaKnown RBP9.17□□□□□ -0.94
YBX3-217ENST00000546164 USMG5Q96IX5 58 aa9.17□□□□□ -0.94
YBX3-217ENST00000546164 ALX4Q9H161 411 aaPredicted RBP9.17□□□□□ -0.94
YBX3-217ENST00000546164 AURKAIP1Q9NWT8 199 aaPredicted RBP9.17□□□□□ -0.94
YBX3-217ENST00000546164 ZMAT5Q9UDW3 170 aaKnown RBP9.17□□□□□ -0.94
YBX3-217ENST00000546164 DNAH9Q9NYC9 4486 aa9.17□□□□□ -0.94
YBX3-217ENST00000546164 IGHV4OR15-8A0A075B7B6 117 aa9.16□□□□□ -0.94
YBX3-217ENST00000546164 A0A087WW49 117 aa9.16□□□□□ -0.94
YBX3-217ENST00000546164 M0QYG6 137 aa9.16□□□□□ -0.94
YBX3-217ENST00000546164 MPPED1O15442 326 aa9.16□□□□□ -0.94
YBX3-217ENST00000546164 IGHV3-11P01762 117 aa9.16□□□□□ -0.94
YBX3-217ENST00000546164 PRB2P02812 416 aaPredicted RBP9.16□□□□□ -0.94
YBX3-217ENST00000546164 CD3DP04234 171 aa9.16□□□□□ -0.94
YBX3-217ENST00000546164 HSPB1P04792 205 aaKnown RBP9.16□□□□□ -0.94
YBX3-217ENST00000546164 IFNA6P05013 189 aa9.16□□□□□ -0.94
YBX3-217ENST00000546164 HLA-GP17693 338 aa9.16□□□□□ -0.94
YBX3-217ENST00000546164 S100GP29377 79 aa9.16□□□□□ -0.94
YBX3-217ENST00000546164 RPL27AP46776 148 aaKnown RBP9.16□□□□□ -0.94
YBX3-217ENST00000546164 TAS2R19P59542 299 aa9.16□□□□□ -0.94
YBX3-217ENST00000546164 KRTAP10-11P60412 298 aa9.16□□□□□ -0.94
YBX3-217ENST00000546164 DGCR2P98153 550 aa9.16□□□□□ -0.94
YBX3-217ENST00000546164 KLK9Q2XQG4 91 aa9.16□□□□□ -0.94
YBX3-217ENST00000546164 RNASE12Q5GAN4 147 aaKnown RBP9.16□□□□□ -0.94
YBX3-217ENST00000546164 C9orf66Q5T8R8 295 aa9.16□□□□□ -0.94
YBX3-217ENST00000546164 SLC25A42Q86VD7 318 aa9.16□□□□□ -0.94
YBX3-217ENST00000546164 DIRAS2Q96HU8 199 aa9.16□□□□□ -0.94
YBX3-217ENST00000546164 SOSTQ9BQB4 213 aa9.16□□□□□ -0.94
YBX3-217ENST00000546164 C6orf62Q9GZU0 229 aaPredicted RBP9.16□□□□□ -0.94
YBX3-217ENST00000546164 RBM38Q9H0Z9 239 aaKnown RBP9.16□□□□□ -0.94
YBX3-217ENST00000546164 SLC2A9Q9NRM0 540 aa9.16□□□□□ -0.94
YBX3-217ENST00000546164 ZNF355PQ9NSJ1 428 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms