RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 RASL11BQ9BPW5 248 aa12.85□□□□□ -0.35
LIMS2-217ENST00000545738 RANBP3Q9H6Z4 567 aaPredicted RBP12.85□□□□□ -0.35
LIMS2-217ENST00000545738 ZNF430Q9H8G1 570 aaPredicted RBP12.85□□□□□ -0.35
LIMS2-217ENST00000545738 FAM212BQ9NTI7 297 aaPredicted RBP12.85□□□□□ -0.35
LIMS2-217ENST00000545738 TMEM140Q9NV12 185 aa12.85□□□□□ -0.35
LIMS2-217ENST00000545738 COMMD9Q9P000 198 aa12.85□□□□□ -0.35
LIMS2-217ENST00000545738 KIAA1456Q9P272 454 aa12.85□□□□□ -0.35
LIMS2-217ENST00000545738 DBX1A6NMT0 343 aa12.85□□□□□ -0.35
LIMS2-217ENST00000545738 E7EUB6 86 aa12.85□□□□□ -0.35
LIMS2-217ENST00000545738 KBTBD11O94819 623 aa12.85□□□□□ -0.35
LIMS2-217ENST00000545738 CDS2O95674 445 aa12.85□□□□□ -0.35
LIMS2-217ENST00000545738 OR9G9P0C7N8 305 aa12.85□□□□□ -0.35
LIMS2-217ENST00000545738 P0C879 139 aa12.85□□□□□ -0.35
LIMS2-217ENST00000545738 EGR2P11161 476 aaPredicted RBP12.85□□□□□ -0.35
LIMS2-217ENST00000545738 NQO2P16083 231 aa12.85□□□□□ -0.35
LIMS2-217ENST00000545738 CX3CL1P78423 397 aa12.85□□□□□ -0.35
LIMS2-217ENST00000545738 HIST2H2BDQ6DRA6 164 aa12.85□□□□□ -0.35
LIMS2-217ENST00000545738 C10orf99Q6UWK7 81 aa12.85□□□□□ -0.35
LIMS2-217ENST00000545738 SGPP2Q8IWX5 399 aa12.85□□□□□ -0.35
LIMS2-217ENST00000545738 FAM103A1Q9BTL3 118 aaKnown RBP12.85□□□□□ -0.35
LIMS2-217ENST00000545738 PRSS22Q9GZN4 317 aa12.85□□□□□ -0.35
LIMS2-217ENST00000545738 C16orf95Q9H693 158 aa12.85□□□□□ -0.35
LIMS2-217ENST00000545738 A0A1B0GW64 132 aa12.84□□□□□ -0.35
LIMS2-217ENST00000545738 OR2A4O95047 310 aa12.84□□□□□ -0.35
LIMS2-217ENST00000545738 SERPINE2P07093 398 aa12.84□□□□□ -0.35
LIMS2-217ENST00000545738 OR4E1P0C645 316 aa12.84□□□□□ -0.35
LIMS2-217ENST00000545738 VAMP1P23763 118 aa12.84□□□□□ -0.35
LIMS2-217ENST00000545738 DHRS2Q13268 280 aa12.84□□□□□ -0.35
LIMS2-217ENST00000545738 PLGLAQ15195 96 aa12.84□□□□□ -0.35
LIMS2-217ENST00000545738 PRSS8Q16651 343 aa12.84□□□□□ -0.35
LIMS2-217ENST00000545738 SELENOHQ8IZQ5 122 aaKnown RBP12.84□□□□□ -0.35
LIMS2-217ENST00000545738 TEX45Q8NA69 505 aa12.84□□□□□ -0.35
LIMS2-217ENST00000545738 ENKURQ8TC29 256 aa12.84□□□□□ -0.35
LIMS2-217ENST00000545738 OR2A7Q96R45 310 aa12.84□□□□□ -0.35
LIMS2-217ENST00000545738 NSG2Q9Y328 171 aa12.84□□□□□ -0.35
LIMS2-217ENST00000545738 TMEM89A2RUT3 159 aa12.83□□□□□ -0.36
LIMS2-217ENST00000545738 ATP6V0E1O15342 81 aa12.83□□□□□ -0.36
LIMS2-217ENST00000545738 SFT2D2O95562 160 aa12.83□□□□□ -0.36
LIMS2-217ENST00000545738 HRASP01112 189 aa12.83□□□□□ -0.36
LIMS2-217ENST00000545738 MECP2P51608 486 aaKnown RBP12.83□□□□□ -0.36
LIMS2-217ENST00000545738 TRIM16LQ309B1 348 aa12.83□□□□□ -0.36
LIMS2-217ENST00000545738 VMA21Q3ZAQ7 101 aa12.83□□□□□ -0.36
LIMS2-217ENST00000545738 DMBX1Q8NFW5 382 aa12.83□□□□□ -0.36
LIMS2-217ENST00000545738 TMEM167AQ8TBQ9 72 aa12.83□□□□□ -0.36
LIMS2-217ENST00000545738 TMEM56Q96MV1 263 aa12.83□□□□□ -0.36
LIMS2-217ENST00000545738 PALMDQ9NP74 551 aa12.83□□□□□ -0.36
LIMS2-217ENST00000545738 BET1LQ9NYM9 111 aa12.83□□□□□ -0.36
LIMS2-217ENST00000545738 TMEM56-RWDD3S4R434 201 aa12.83□□□□□ -0.36
LIMS2-217ENST00000545738 C9orf170A2RU37 121 aa12.82□□□□□ -0.36
LIMS2-217ENST00000545738 CGB1A6NKQ9 187 aa12.82□□□□□ -0.36
LIMS2-217ENST00000545738 DEFA1P59665 94 aa12.82□□□□□ -0.36
LIMS2-217ENST00000545738 DEFA3P59666 94 aa12.82□□□□□ -0.36
LIMS2-217ENST00000545738 KRTAP10-3P60369 221 aa12.82□□□□□ -0.36
LIMS2-217ENST00000545738 UBE2MP61081 183 aaKnown RBP12.82□□□□□ -0.36
LIMS2-217ENST00000545738 Q6ZRM9 215 aa12.82□□□□□ -0.36
LIMS2-217ENST00000545738 SLC35G3Q8N808 338 aa12.82□□□□□ -0.36
LIMS2-217ENST00000545738 CASTOR1Q8WTX7 329 aa12.82□□□□□ -0.36
LIMS2-217ENST00000545738 SEC22CQ9BRL7 303 aa12.82□□□□□ -0.36
LIMS2-217ENST00000545738 NUBP2Q9Y5Y2 271 aa12.82□□□□□ -0.36
LIMS2-217ENST00000545738 G3V318 75 aa12.82□□□□□ -0.36
LIMS2-217ENST00000545738 HLA-AP01891 365 aaKnown RBP12.82□□□□□ -0.36
LIMS2-217ENST00000545738 H2AFB2P0C5Z0 115 aa12.82□□□□□ -0.36
LIMS2-217ENST00000545738 PROK1P58294 105 aa12.82□□□□□ -0.36
LIMS2-217ENST00000545738 GNB1P62873 340 aa12.82□□□□□ -0.36
LIMS2-217ENST00000545738 AWAT1Q58HT5 328 aa12.82□□□□□ -0.36
LIMS2-217ENST00000545738 TMEM268Q5VZI3 342 aa12.82□□□□□ -0.36
LIMS2-217ENST00000545738 ZNF562Q6V9R5 426 aa12.82□□□□□ -0.36
LIMS2-217ENST00000545738 LYZL2Q7Z4W2 148 aa12.82□□□□□ -0.36
LIMS2-217ENST00000545738 SLC35E3Q7Z769 313 aa12.82□□□□□ -0.36
LIMS2-217ENST00000545738 WIPF2Q8TF74 440 aaPredicted RBP12.82□□□□□ -0.36
LIMS2-217ENST00000545738 WNT10AQ9GZT5 417 aa12.82□□□□□ -0.36
LIMS2-217ENST00000545738 OR51J1Q9H342 316 aa12.82□□□□□ -0.36
LIMS2-217ENST00000545738 A0A0B4J293 547 aa12.81□□□□□ -0.36
LIMS2-217ENST00000545738 UPK2O00526 184 aa12.81□□□□□ -0.36
LIMS2-217ENST00000545738 OPN1MWP04001 364 aa12.81□□□□□ -0.36
LIMS2-217ENST00000545738 OPN1MW2P0DN77 364 aa12.81□□□□□ -0.36
LIMS2-217ENST00000545738 OPN1MW3P0DN78 364 aa12.81□□□□□ -0.36
LIMS2-217ENST00000545738 OR2B8PP59922 312 aa12.81□□□□□ -0.36
LIMS2-217ENST00000545738 SRSF4Q08170 494 aaKnown RBP12.81□□□□□ -0.36
LIMS2-217ENST00000545738 OR2T6Q8NHC8 308 aa12.81□□□□□ -0.36
LIMS2-217ENST00000545738 RBPMSQ93062 196 aaKnown RBP12.81□□□□□ -0.36
LIMS2-217ENST00000545738 ALX4Q9H161 411 aaPredicted RBP12.81□□□□□ -0.36
LIMS2-217ENST00000545738 PARP11Q9NR21 331 aa12.81□□□□□ -0.36
LIMS2-217ENST00000545738 CLPSL1A2RUU4 121 aa12.8□□□□□ -0.36
LIMS2-217ENST00000545738 B3GALNT1O75752 331 aa12.8□□□□□ -0.36
LIMS2-217ENST00000545738 APELAP0DMC3 54 aa12.8□□□□□ -0.36
LIMS2-217ENST00000545738 VDAC2P45880 294 aaPredicted RBP12.8□□□□□ -0.36
LIMS2-217ENST00000545738 FXYD3Q14802 87 aa12.8□□□□□ -0.36
LIMS2-217ENST00000545738 TNXAQ16473 311 aa12.8□□□□□ -0.36
LIMS2-217ENST00000545738 C19orf54Q5BKX5 351 aa12.8□□□□□ -0.36
LIMS2-217ENST00000545738 ASPHD1Q5U4P2 390 aa12.8□□□□□ -0.36
LIMS2-217ENST00000545738 Q6ZNX1 250 aa12.8□□□□□ -0.36
LIMS2-217ENST00000545738 LYG2Q86SG7 212 aa12.8□□□□□ -0.36
LIMS2-217ENST00000545738 OR4F5Q8NH21 305 aa12.8□□□□□ -0.36
LIMS2-217ENST00000545738 MARVELD1Q9BSK0 173 aa12.8□□□□□ -0.36
LIMS2-217ENST00000545738 KCNIP3Q9Y2W7 256 aa12.8□□□□□ -0.36
LIMS2-217ENST00000545738 RNF114Q9Y508 228 aa12.8□□□□□ -0.36
LIMS2-217ENST00000545738 IGF1P05019 195 aa12.79□□□□□ -0.36
LIMS2-217ENST00000545738 COMPP49747 757 aaPredicted RBP12.79□□□□□ -0.36
LIMS2-217ENST00000545738 C4orf46Q504U0 113 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms