RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 MIEN1Q9BRT3 115 aa7.26□□□□□ -1.25
TDP1-204ENST00000545686 MRPL18Q9H0U6 180 aaKnown RBP7.26□□□□□ -1.25
TDP1-204ENST00000545686 MS4A5Q9H3V2 200 aa7.26□□□□□ -1.25
TDP1-204ENST00000545686 HEYLQ9NQ87 328 aaPredicted RBP7.26□□□□□ -1.25
TDP1-204ENST00000545686 R4GN57 208 aa7.26□□□□□ -1.25
TDP1-204ENST00000545686 A0A1B0GUS0 222 aa7.26□□□□□ -1.25
TDP1-204ENST00000545686 FNDC10F2Z333 226 aa7.26□□□□□ -1.25
TDP1-204ENST00000545686 RPLP1P05386 114 aaKnown RBP7.26□□□□□ -1.25
TDP1-204ENST00000545686 TNFSF10P50591 281 aa7.26□□□□□ -1.25
TDP1-204ENST00000545686 LGALS4P56470 323 aa7.26□□□□□ -1.25
TDP1-204ENST00000545686 GAGE1Q13065 139 aa7.26□□□□□ -1.25
TDP1-204ENST00000545686 COX19Q49B96 90 aa7.26□□□□□ -1.25
TDP1-204ENST00000545686 TOMM20LQ6UXN7 152 aa7.26□□□□□ -1.25
TDP1-204ENST00000545686 WDR82Q6UXN9 313 aa7.26□□□□□ -1.25
TDP1-204ENST00000545686 Q6ZWC4 215 aa7.26□□□□□ -1.25
TDP1-204ENST00000545686 SDSLQ96GA7 329 aa7.26□□□□□ -1.25
TDP1-204ENST00000545686 NPVFQ9HCQ7 196 aa7.26□□□□□ -1.25
TDP1-204ENST00000545686 TP53TG3Q9ULZ0 132 aa7.26□□□□□ -1.25
TDP1-204ENST00000545686 FCGR3BO75015 233 aa7.25□□□□□ -1.25
TDP1-204ENST00000545686 MT-ND6P03923 174 aa7.25□□□□□ -1.25
TDP1-204ENST00000545686 OR10J4P0C629 311 aa7.25□□□□□ -1.25
TDP1-204ENST00000545686 BMP5P22003 454 aa7.25□□□□□ -1.25
TDP1-204ENST00000545686 MPV17P39210 176 aa7.25□□□□□ -1.25
TDP1-204ENST00000545686 LINC00310P59036 64 aa7.25□□□□□ -1.25
TDP1-204ENST00000545686 RPL31P62899 125 aaKnown RBP7.25□□□□□ -1.25
TDP1-204ENST00000545686 RPEL1Q2QD12 228 aa7.25□□□□□ -1.25
TDP1-204ENST00000545686 MIC13Q5XKP0 118 aa7.25□□□□□ -1.25
TDP1-204ENST00000545686 LINC00696Q6ZRV3 163 aa7.25□□□□□ -1.25
TDP1-204ENST00000545686 ATG101Q9BSB4 218 aa7.25□□□□□ -1.25
TDP1-204ENST00000545686 SFXN3Q9BWM7 321 aa7.25□□□□□ -1.25
TDP1-204ENST00000545686 GNB1LQ9BYB4 327 aa7.25□□□□□ -1.25
TDP1-204ENST00000545686 YTHDF2Q9Y5A9 579 aaKnown RBP7.25□□□□□ -1.25
TDP1-204ENST00000545686 FAM186AA6NE01 2351 aa7.25□□□□□ -1.25
TDP1-204ENST00000545686 IGHV3-43A0A0B4J1X8 118 aa7.25□□□□□ -1.25
TDP1-204ENST00000545686 C9orf172C9J069 976 aa7.25□□□□□ -1.25
TDP1-204ENST00000545686 RRHO14718 337 aa7.25□□□□□ -1.25
TDP1-204ENST00000545686 SERF1AO75920 110 aa7.25□□□□□ -1.25
TDP1-204ENST00000545686 IL6RP08887 468 aaPredicted RBP7.25□□□□□ -1.25
TDP1-204ENST00000545686 IGHV3-43DP0DP04 118 aa7.25□□□□□ -1.25
TDP1-204ENST00000545686 BTF3P20290 206 aaKnown RBP7.25□□□□□ -1.25
TDP1-204ENST00000545686 IGHV1-2P23083 117 aa7.25□□□□□ -1.25
TDP1-204ENST00000545686 CBLN1P23435 193 aa7.25□□□□□ -1.25
TDP1-204ENST00000545686 RPL29P47914 159 aaKnown RBP7.25□□□□□ -1.25
TDP1-204ENST00000545686 RELBQ01201 579 aa7.25□□□□□ -1.25
TDP1-204ENST00000545686 MZT1Q08AG7 82 aa7.25□□□□□ -1.25
TDP1-204ENST00000545686 RAB31Q13636 194 aa7.25□□□□□ -1.25
TDP1-204ENST00000545686 CR1LQ2VPA4 569 aa7.25□□□□□ -1.25
TDP1-204ENST00000545686 WDR73Q6P4I2 378 aa7.25□□□□□ -1.25
TDP1-204ENST00000545686 TEPPQ6URK8 271 aa7.25□□□□□ -1.25
TDP1-204ENST00000545686 ZNF826PQ6ZT77 177 aa7.25□□□□□ -1.25
TDP1-204ENST00000545686 OR5AU1Q8NGC0 362 aa7.25□□□□□ -1.25
TDP1-204ENST00000545686 Q8TCH9 128 aa7.25□□□□□ -1.25
TDP1-204ENST00000545686 OPN3Q9H1Y3 402 aaPredicted RBP7.25□□□□□ -1.25
TDP1-204ENST00000545686 PARD6AQ9NPB6 346 aa7.25□□□□□ -1.25
TDP1-204ENST00000545686 SLC25A10Q9UBX3 287 aaPredicted RBP7.25□□□□□ -1.25
TDP1-204ENST00000545686 TRGV5A0A0B4J1U4 118 aa7.24□□□□□ -1.25
TDP1-204ENST00000545686 IGHV3-64DA0A0J9YX35 117 aa7.24□□□□□ -1.25
TDP1-204ENST00000545686 GRIFINA4D1Z8 144 aa7.24□□□□□ -1.25
TDP1-204ENST00000545686 K7EN84 100 aa7.24□□□□□ -1.25
TDP1-204ENST00000545686 CD46P15529 392 aa7.24□□□□□ -1.25
TDP1-204ENST00000545686 EFNB3Q15768 340 aa7.24□□□□□ -1.25
TDP1-204ENST00000545686 VASH2Q86V25 355 aa7.24□□□□□ -1.25
TDP1-204ENST00000545686 FAM90A1Q86YD7 464 aa7.24□□□□□ -1.25
TDP1-204ENST00000545686 OR1L6Q8NGR2 347 aa7.24□□□□□ -1.25
TDP1-204ENST00000545686 CORO2AQ92828 525 aa7.24□□□□□ -1.25
TDP1-204ENST00000545686 EAF1Q96JC9 268 aaPredicted RBP7.24□□□□□ -1.25
TDP1-204ENST00000545686 VAMP8Q9BV40 100 aa7.24□□□□□ -1.25
TDP1-204ENST00000545686 SPRR3Q9UBC9 169 aa7.24□□□□□ -1.25
TDP1-204ENST00000545686 TCF19Q9Y242 345 aa7.24□□□□□ -1.25
TDP1-204ENST00000545686 CACNA1GO43497 2377 aa7.24□□□□□ -1.25
TDP1-204ENST00000545686 SAA2-SAA4A0A096LPE2 208 aa7.24□□□□□ -1.25
TDP1-204ENST00000545686 C15orf61A6NNL5 157 aa7.24□□□□□ -1.25
TDP1-204ENST00000545686 AQP7O14520 342 aa7.24□□□□□ -1.25
TDP1-204ENST00000545686 ITGB1BP1O14713 200 aa7.24□□□□□ -1.25
TDP1-204ENST00000545686 PROP1O75360 226 aa7.24□□□□□ -1.25
TDP1-204ENST00000545686 IGKV3-15P01624 115 aa7.24□□□□□ -1.25
TDP1-204ENST00000545686 ZNF883P0CG24 379 aa7.24□□□□□ -1.25
TDP1-204ENST00000545686 MORN2Q502X0 79 aa7.24□□□□□ -1.25
TDP1-204ENST00000545686 ZNF705AQ6ZN79 300 aaPredicted RBP7.24□□□□□ -1.25
TDP1-204ENST00000545686 CXorf67Q86X51 503 aaPredicted RBP7.24□□□□□ -1.25
TDP1-204ENST00000545686 STPG3Q8N7X2 389 aa7.24□□□□□ -1.25
TDP1-204ENST00000545686 C1orf162Q8NEQ5 155 aaPredicted RBP7.24□□□□□ -1.25
TDP1-204ENST00000545686 OR4B1Q8NGF8 309 aa7.24□□□□□ -1.25
TDP1-204ENST00000545686 OR4S2Q8NH73 311 aa7.24□□□□□ -1.25
TDP1-204ENST00000545686 C1orf159Q96HA4 380 aa7.24□□□□□ -1.25
TDP1-204ENST00000545686 HSPB9Q9BQS6 159 aa7.24□□□□□ -1.25
TDP1-204ENST00000545686 TMEM167BQ9NRX6 74 aa7.24□□□□□ -1.25
TDP1-204ENST00000545686 TMEM140Q9NV12 185 aa7.24□□□□□ -1.25
TDP1-204ENST00000545686 METRNQ9UJH8 293 aa7.24□□□□□ -1.25
TDP1-204ENST00000545686 SSUH2Q9Y2M2 353 aa7.24□□□□□ -1.25
TDP1-204ENST00000545686 FREM2Q5SZK8 3169 aa7.24□□□□□ -1.25
TDP1-204ENST00000545686 DEFB108AA8MXU0 73 aa7.23□□□□□ -1.25
TDP1-204ENST00000545686 M0R1X1 148 aa7.23□□□□□ -1.25
TDP1-204ENST00000545686 F2RL2O00254 374 aa7.23□□□□□ -1.25
TDP1-204ENST00000545686 FCN1O00602 326 aa7.23□□□□□ -1.25
TDP1-204ENST00000545686 DLEU1O43261 78 aa7.23□□□□□ -1.25
TDP1-204ENST00000545686 TIMM8AO60220 97 aaPredicted RBP7.23□□□□□ -1.25
TDP1-204ENST00000545686 MMP23AO75900 390 aa7.23□□□□□ -1.25
TDP1-204ENST00000545686 LINC00205P59089 165 aa7.23□□□□□ -1.25
TDP1-204ENST00000545686 OR10J3Q5JRS4 329 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms