RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 OR9G1Q8NH87 305 aa13.58□□□□□ -0.24
CHFR-224ENST00000545046 RBMXL1Q96E39 390 aaKnown RBP13.58□□□□□ -0.24
CHFR-224ENST00000545046 MRPL20Q9BYC9 149 aaKnown RBP13.58□□□□□ -0.24
CHFR-224ENST00000545046 KIAA1456Q9P272 454 aa13.58□□□□□ -0.24
CHFR-224ENST00000545046 PRNDQ9UKY0 176 aa13.58□□□□□ -0.24
CHFR-224ENST00000545046 NBASA2RRP1 2371 aa13.58□□□□□ -0.24
CHFR-224ENST00000545046 A0A087X0M5 115 aa13.57□□□□□ -0.24
CHFR-224ENST00000545046 A0A1B0GX30 115 aa13.57□□□□□ -0.24
CHFR-224ENST00000545046 A0A1W2PPH5 198 aa13.57□□□□□ -0.24
CHFR-224ENST00000545046 F12P00748 615 aaPredicted RBP13.57□□□□□ -0.24
CHFR-224ENST00000545046 VWC2Q2TAL6 325 aa13.57□□□□□ -0.24
CHFR-224ENST00000545046 CENPVQ7Z7K6 275 aaPredicted RBP13.57□□□□□ -0.24
CHFR-224ENST00000545046 VSIRQ9H7M9 311 aa13.57□□□□□ -0.24
CHFR-224ENST00000545046 SMG1Q96Q15 3661 aaKnown RBP13.57□□□□□ -0.24
CHFR-224ENST00000545046 TRAV1-1A0A0B4J248 108 aa13.56□□□□□ -0.24
CHFR-224ENST00000545046 IGKV1-16P04430 117 aa13.56□□□□□ -0.24
CHFR-224ENST00000545046 PLA2G5P39877 138 aa13.56□□□□□ -0.24
CHFR-224ENST00000545046 RAB11AP62491 216 aa13.56□□□□□ -0.24
CHFR-224ENST00000545046 AVPI1Q5T686 147 aa13.56□□□□□ -0.24
CHFR-224ENST00000545046 ZNF841Q6ZN19 808 aa13.56□□□□□ -0.24
CHFR-224ENST00000545046 ABHD12Q8N2K0 398 aa13.56□□□□□ -0.24
CHFR-224ENST00000545046 ZNF709Q8N972 641 aa13.56□□□□□ -0.24
CHFR-224ENST00000545046 OSR1Q8TAX0 266 aaPredicted RBP13.56□□□□□ -0.24
CHFR-224ENST00000545046 SLC35B3Q9H1N7 401 aa13.56□□□□□ -0.24
CHFR-224ENST00000545046 MIOXQ9UGB7 285 aa13.56□□□□□ -0.24
CHFR-224ENST00000545046 OR51B2Q9Y5P1 312 aa13.56□□□□□ -0.24
CHFR-224ENST00000545046 DNASE2O00115 360 aaPredicted RBP13.56□□□□□ -0.24
CHFR-224ENST00000545046 UPK2O00526 184 aa13.56□□□□□ -0.24
CHFR-224ENST00000545046 TSPAN4O14817 238 aa13.56□□□□□ -0.24
CHFR-224ENST00000545046 NUPL2O15504 423 aaKnown RBP13.56□□□□□ -0.24
CHFR-224ENST00000545046 IL3RAP26951 378 aa13.56□□□□□ -0.24
CHFR-224ENST00000545046 ELLP55199 621 aaPredicted RBP13.56□□□□□ -0.24
CHFR-224ENST00000545046 SP5Q6BEB4 398 aaPredicted RBP13.56□□□□□ -0.24
CHFR-224ENST00000545046 ETV3LQ6ZN32 361 aa13.56□□□□□ -0.24
CHFR-224ENST00000545046 NEU4Q8WWR8 484 aaPredicted RBP13.56□□□□□ -0.24
CHFR-224ENST00000545046 TIMD4Q96H15 378 aa13.56□□□□□ -0.24
CHFR-224ENST00000545046 TMEM133Q9H2Q1 129 aa13.56□□□□□ -0.24
CHFR-224ENST00000545046 FKBP11Q9NYL4 201 aa13.56□□□□□ -0.24
CHFR-224ENST00000545046 C17orf112F2Z3M2 114 aa13.55□□□□□ -0.24
CHFR-224ENST00000545046 H0YJW9 148 aa13.55□□□□□ -0.24
CHFR-224ENST00000545046 IL6RP08887 468 aaPredicted RBP13.55□□□□□ -0.24
CHFR-224ENST00000545046 C11orf71Q6IPW1 123 aa13.55□□□□□ -0.24
CHFR-224ENST00000545046 OR8B3Q8NGG8 313 aa13.55□□□□□ -0.24
CHFR-224ENST00000545046 OR5AN1Q8NGI8 311 aa13.55□□□□□ -0.24
CHFR-224ENST00000545046 MBD3L1Q8WWY6 194 aa13.55□□□□□ -0.24
CHFR-224ENST00000545046 RAB1CQ92928 201 aa13.55□□□□□ -0.24
CHFR-224ENST00000545046 OR8B2Q96RD0 313 aa13.55□□□□□ -0.24
CHFR-224ENST00000545046 RARRES2Q99969 163 aa13.55□□□□□ -0.24
CHFR-224ENST00000545046 BET1LQ9NYM9 111 aa13.55□□□□□ -0.24
CHFR-224ENST00000545046 MBP02144 154 aa13.55□□□□□ -0.24
CHFR-224ENST00000545046 GNLYP22749 145 aa13.55□□□□□ -0.24
CHFR-224ENST00000545046 REG1BP48304 166 aa13.55□□□□□ -0.24
CHFR-224ENST00000545046 HNF4GQ14541 408 aa13.55□□□□□ -0.24
CHFR-224ENST00000545046 LHX4Q969G2 390 aa13.55□□□□□ -0.24
CHFR-224ENST00000545046 FLYWCH2Q96CP2 140 aaKnown RBP13.55□□□□□ -0.24
CHFR-224ENST00000545046 GGACTQ9BVM4 153 aa13.55□□□□□ -0.24
CHFR-224ENST00000545046 ZNF257Q9Y2Q1 563 aa13.55□□□□□ -0.24
CHFR-224ENST00000545046 PIEZO1Q92508 2521 aa13.55□□□□□ -0.24
CHFR-224ENST00000545046 SRRM4A7MD48 611 aaKnown RBP13.54□□□□□ -0.24
CHFR-224ENST00000545046 RRHO14718 337 aa13.54□□□□□ -0.24
CHFR-224ENST00000545046 KBTBD11O94819 623 aa13.54□□□□□ -0.24
CHFR-224ENST00000545046 AGAP20933 346 aa13.54□□□□□ -0.24
CHFR-224ENST00000545046 CD1BP29016 333 aa13.54□□□□□ -0.24
CHFR-224ENST00000545046 NPBWR1P48145 328 aa13.54□□□□□ -0.24
CHFR-224ENST00000545046 HAGHQ16775 308 aa13.54□□□□□ -0.24
CHFR-224ENST00000545046 TMEM177Q53S58 311 aa13.54□□□□□ -0.24
CHFR-224ENST00000545046 C11orf42Q8N5U0 333 aa13.54□□□□□ -0.24
CHFR-224ENST00000545046 NEIL1Q96FI4 390 aaPredicted RBP13.54□□□□□ -0.24
CHFR-224ENST00000545046 HARBI1Q96MB7 349 aa13.54□□□□□ -0.24
CHFR-224ENST00000545046 NABP2Q9BQ15 211 aa13.54□□□□□ -0.24
CHFR-224ENST00000545046 HINT2Q9BX68 163 aa13.54□□□□□ -0.24
CHFR-224ENST00000545046 NPCDR1Q9BY65 106 aa13.54□□□□□ -0.24
CHFR-224ENST00000545046 ABCA4P78363 2273 aa13.54□□□□□ -0.24
CHFR-224ENST00000545046 FAM74A7A6NL05 159 aa13.54□□□□□ -0.24
CHFR-224ENST00000545046 IFNA4P05014 189 aa13.54□□□□□ -0.24
CHFR-224ENST00000545046 SOD3P08294 240 aa13.54□□□□□ -0.24
CHFR-224ENST00000545046 UQCRFS1P47985 274 aa13.54□□□□□ -0.24
CHFR-224ENST00000545046 ZNF137PP52743 207 aa13.54□□□□□ -0.24
CHFR-224ENST00000545046 PRRX1P54821 245 aa13.54□□□□□ -0.24
CHFR-224ENST00000545046 FAM74A3Q4VXF1 159 aa13.54□□□□□ -0.24
CHFR-224ENST00000545046 ZNF787Q6DD87 383 aa13.54□□□□□ -0.24
CHFR-224ENST00000545046 LCN15Q6UWW0 184 aa13.54□□□□□ -0.24
CHFR-224ENST00000545046 PDPNQ86YL7 162 aa13.54□□□□□ -0.24
CHFR-224ENST00000545046 TGIF2LXQ8IUE1 241 aa13.54□□□□□ -0.24
CHFR-224ENST00000545046 CLRN3Q8NCR9 226 aa13.54□□□□□ -0.24
CHFR-224ENST00000545046 ITLN2Q8WWU7 325 aaPredicted RBP13.54□□□□□ -0.24
CHFR-224ENST00000545046 ST6GALNAC6Q969X2 333 aa13.54□□□□□ -0.24
CHFR-224ENST00000545046 RCC1LQ96I51 464 aaKnown RBP13.54□□□□□ -0.24
CHFR-224ENST00000545046 SLC39A9Q9NUM3 307 aa13.54□□□□□ -0.24
CHFR-224ENST00000545046 ITPR1Q14643 2758 aa13.53□□□□□ -0.24
CHFR-224ENST00000545046 PPIAL4CA0A0B4J2A2 164 aa13.53□□□□□ -0.24
CHFR-224ENST00000545046 SAA1P0DJI8 122 aaPredicted RBP13.53□□□□□ -0.24
CHFR-224ENST00000545046 PPIAL4GP0DN37 164 aa13.53□□□□□ -0.24
CHFR-224ENST00000545046 MDKP21741 143 aaPredicted RBP13.53□□□□□ -0.24
CHFR-224ENST00000545046 ZNF726P1Q15940 193 aa13.53□□□□□ -0.24
CHFR-224ENST00000545046 OR4C13Q8NGP0 309 aa13.53□□□□□ -0.24
CHFR-224ENST00000545046 CLDND2Q8NHS1 167 aa13.53□□□□□ -0.24
CHFR-224ENST00000545046 TNFRSF14Q92956 283 aa13.53□□□□□ -0.24
CHFR-224ENST00000545046 PCGF1Q9BSM1 259 aa13.53□□□□□ -0.24
CHFR-224ENST00000545046 SMCO3A2RU48 225 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms