RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 C9orf66Q5T8R8 295 aa12.18□□□□□ -0.46
CCDC78-216ENST00000544996 ASPHD1Q5U4P2 390 aa12.18□□□□□ -0.46
CCDC78-216ENST00000544996 SSX9Q7RTT3 188 aa12.18□□□□□ -0.46
CCDC78-216ENST00000544996 PUSL1Q8N0Z8 303 aaKnown RBP12.18□□□□□ -0.46
CCDC78-216ENST00000544996 TMEM167AQ8TBQ9 72 aa12.18□□□□□ -0.46
CCDC78-216ENST00000544996 MRAPQ8TCY5 172 aa12.18□□□□□ -0.46
CCDC78-216ENST00000544996 FCAMRQ8WWV6 532 aa12.18□□□□□ -0.46
CCDC78-216ENST00000544996 ALX4Q9H161 411 aaPredicted RBP12.18□□□□□ -0.46
CCDC78-216ENST00000544996 HRASLSQ9HDD0 168 aa12.18□□□□□ -0.46
CCDC78-216ENST00000544996 CCDC59Q9P031 241 aaKnown RBP12.18□□□□□ -0.46
CCDC78-216ENST00000544996 SCOCQ9UIL1 159 aa12.18□□□□□ -0.46
CCDC78-216ENST00000544996 GPR31O00270 319 aa12.17□□□□□ -0.46
CCDC78-216ENST00000544996 HSPB1P04792 205 aaKnown RBP12.17□□□□□ -0.46
CCDC78-216ENST00000544996 RLN1P04808 185 aa12.17□□□□□ -0.46
CCDC78-216ENST00000544996 IFNA6P05013 189 aa12.17□□□□□ -0.46
CCDC78-216ENST00000544996 OR9G9P0C7N8 305 aa12.17□□□□□ -0.46
CCDC78-216ENST00000544996 NQO2P16083 231 aa12.17□□□□□ -0.46
CCDC78-216ENST00000544996 RNASE12Q5GAN4 147 aaKnown RBP12.17□□□□□ -0.46
CCDC78-216ENST00000544996 VAX1Q5SQQ9 334 aa12.17□□□□□ -0.46
CCDC78-216ENST00000544996 OR4A5Q8NH83 315 aa12.17□□□□□ -0.46
CCDC78-216ENST00000544996 USMG5Q96IX5 58 aa12.17□□□□□ -0.46
CCDC78-216ENST00000544996 ABHD1Q96SE0 405 aa12.17□□□□□ -0.46
CCDC78-216ENST00000544996 TINAGL1Q9GZM7 467 aaPredicted RBP12.17□□□□□ -0.46
CCDC78-216ENST00000544996 PLEKHA2Q9HB19 425 aa12.17□□□□□ -0.46
CCDC78-216ENST00000544996 IGHV4OR15-8A0A075B7B6 117 aa12.16□□□□□ -0.46
CCDC78-216ENST00000544996 A0A087WW49 117 aa12.16□□□□□ -0.46
CCDC78-216ENST00000544996 CTDSP2O14595 271 aa12.16□□□□□ -0.46
CCDC78-216ENST00000544996 PGLYRP1O75594 196 aaPredicted RBP12.16□□□□□ -0.46
CCDC78-216ENST00000544996 TBPP20226 339 aa12.16□□□□□ -0.46
CCDC78-216ENST00000544996 F2RP25116 425 aa12.16□□□□□ -0.46
CCDC78-216ENST00000544996 KRTAP10-11P60412 298 aa12.16□□□□□ -0.46
CCDC78-216ENST00000544996 RPL8P62917 257 aaKnown RBP12.16□□□□□ -0.46
CCDC78-216ENST00000544996 RNASE10Q5GAN6 216 aaKnown RBP12.16□□□□□ -0.46
CCDC78-216ENST00000544996 C10orf55Q5SWW7 151 aa12.16□□□□□ -0.46
CCDC78-216ENST00000544996 OR4A47Q6IF82 309 aa12.16□□□□□ -0.46
CCDC78-216ENST00000544996 SLC25A42Q86VD7 318 aa12.16□□□□□ -0.46
CCDC78-216ENST00000544996 LAX1Q8IWV1 398 aa12.16□□□□□ -0.46
CCDC78-216ENST00000544996 ADAD2Q8NCV1 583 aaKnown RBP12.16□□□□□ -0.46
CCDC78-216ENST00000544996 DMBX1Q8NFW5 382 aa12.16□□□□□ -0.46
CCDC78-216ENST00000544996 OR52I2Q8NH67 350 aa12.16□□□□□ -0.46
CCDC78-216ENST00000544996 DYNC2LI1Q8TCX1 351 aa12.16□□□□□ -0.46
CCDC78-216ENST00000544996 FXYD6Q9H0Q3 95 aa12.16□□□□□ -0.46
CCDC78-216ENST00000544996 MIXL1Q9H2W2 232 aa12.16□□□□□ -0.46
CCDC78-216ENST00000544996 RANGRFQ9HD47 186 aaPredicted RBP12.16□□□□□ -0.46
CCDC78-216ENST00000544996 BET1LQ9NYM9 111 aa12.16□□□□□ -0.46
CCDC78-216ENST00000544996 KLK11Q9UBX7 282 aa12.16□□□□□ -0.46
CCDC78-216ENST00000544996 MTFP1Q9UDX5 166 aa12.16□□□□□ -0.46
CCDC78-216ENST00000544996 DPPA5A6NC42 116 aa12.15□□□□□ -0.46
CCDC78-216ENST00000544996 H3BMQ9 156 aa12.15□□□□□ -0.46
CCDC78-216ENST00000544996 OVOL1O14753 267 aa12.15□□□□□ -0.46
CCDC78-216ENST00000544996 RPL27AP46776 148 aaKnown RBP12.15□□□□□ -0.46
CCDC78-216ENST00000544996 INSL3P51460 131 aa12.15□□□□□ -0.46
CCDC78-216ENST00000544996 ERVK-16P61578 105 aa12.15□□□□□ -0.46
CCDC78-216ENST00000544996 MRPS10P82664 201 aaKnown RBP12.15□□□□□ -0.46
CCDC78-216ENST00000544996 POU2AF1Q16633 256 aa12.15□□□□□ -0.46
CCDC78-216ENST00000544996 DCUN1D4Q92564 292 aa12.15□□□□□ -0.46
CCDC78-216ENST00000544996 ISOC1Q96CN7 298 aa12.15□□□□□ -0.46
CCDC78-216ENST00000544996 DGCR14Q96DF8 476 aaKnown RBP12.15□□□□□ -0.46
CCDC78-216ENST00000544996 FYTTD1Q96QD9 318 aaKnown RBP12.15□□□□□ -0.46
CCDC78-216ENST00000544996 COMMD9Q9P000 198 aa12.15□□□□□ -0.46
CCDC78-216ENST00000544996 RABL2AQ9UBK7 228 aaPredicted RBP12.15□□□□□ -0.46
CCDC78-216ENST00000544996 RABL2BQ9UNT1 228 aa12.15□□□□□ -0.46
CCDC78-216ENST00000544996 M0QYG6 137 aa12.14□□□□□ -0.47
CCDC78-216ENST00000544996 HLA-GP17693 338 aa12.14□□□□□ -0.47
CCDC78-216ENST00000544996 SLURP1P55000 103 aa12.14□□□□□ -0.47
CCDC78-216ENST00000544996 UCP3P55916 312 aa12.14□□□□□ -0.47
CCDC78-216ENST00000544996 DGCR2P98153 550 aa12.14□□□□□ -0.47
CCDC78-216ENST00000544996 PHLDA2Q53GA4 152 aa12.14□□□□□ -0.47
CCDC78-216ENST00000544996 SLC38A6Q8IZM9 456 aa12.14□□□□□ -0.47
CCDC78-216ENST00000544996 TTC9CQ8N5M4 171 aa12.14□□□□□ -0.47
CCDC78-216ENST00000544996 DLX4Q92988 240 aaPredicted RBP12.14□□□□□ -0.47
CCDC78-216ENST00000544996 DIRAS2Q96HU8 199 aa12.14□□□□□ -0.47
CCDC78-216ENST00000544996 C6orf62Q9GZU0 229 aaPredicted RBP12.14□□□□□ -0.47
CCDC78-216ENST00000544996 ZNF257Q9Y2Q1 563 aa12.14□□□□□ -0.47
CCDC78-216ENST00000544996 CCDC160A6NGH7 325 aa12.13□□□□□ -0.47
CCDC78-216ENST00000544996 HMX3A6NHT5 357 aa12.13□□□□□ -0.47
CCDC78-216ENST00000544996 FAM223BA6NKX1 122 aa12.13□□□□□ -0.47
CCDC78-216ENST00000544996 GABARAPH6UMI1 98 aa12.13□□□□□ -0.47
CCDC78-216ENST00000544996 UPK2O00526 184 aa12.13□□□□□ -0.47
CCDC78-216ENST00000544996 S1PR2O95136 353 aa12.13□□□□□ -0.47
CCDC78-216ENST00000544996 DHFRP00374 187 aa12.13□□□□□ -0.47
CCDC78-216ENST00000544996 CD3DP04234 171 aa12.13□□□□□ -0.47
CCDC78-216ENST00000544996 ZNF735P0CB33 412 aa12.13□□□□□ -0.47
CCDC78-216ENST00000544996 ZP3P21754 424 aa12.13□□□□□ -0.47
CCDC78-216ENST00000544996 LPAR6P43657 344 aa12.13□□□□□ -0.47
CCDC78-216ENST00000544996 TAS2R19P59542 299 aa12.13□□□□□ -0.47
CCDC78-216ENST00000544996 RHOGP84095 191 aa12.13□□□□□ -0.47
CCDC78-216ENST00000544996 SSBP1Q04837 148 aaKnown RBP12.13□□□□□ -0.47
CCDC78-216ENST00000544996 FAM223AQ8IWN6 122 aa12.13□□□□□ -0.47
CCDC78-216ENST00000544996 ARRDC1Q8N5I2 433 aa12.13□□□□□ -0.47
CCDC78-216ENST00000544996 RSRP1Q9BUV0 290 aa12.13□□□□□ -0.47
CCDC78-216ENST00000544996 COMMD5Q9GZQ3 224 aa12.13□□□□□ -0.47
CCDC78-216ENST00000544996 SLC2A9Q9NRM0 540 aa12.13□□□□□ -0.47
CCDC78-216ENST00000544996 TMEM140Q9NV12 185 aa12.13□□□□□ -0.47
CCDC78-216ENST00000544996 ANKRD34BA5PLL1 514 aa12.12□□□□□ -0.47
CCDC78-216ENST00000544996 NPIPB5A8MRT5 1133 aa12.12□□□□□ -0.47
CCDC78-216ENST00000544996 TEX22C9J3V5 150 aa12.12□□□□□ -0.47
CCDC78-216ENST00000544996 IL6RP08887 468 aaPredicted RBP12.12□□□□□ -0.47
CCDC78-216ENST00000544996 FGF2P09038 288 aa12.12□□□□□ -0.47
CCDC78-216ENST00000544996 ATP5G2Q06055 141 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms