RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-223	ENST00000544669	RHOV	Q96L33	236 aa		10.78	□□□□□ -0.68
CPSF7-223	ENST00000544669	TMEM14B	Q9NUH8	114 aa		10.78	□□□□□ -0.68
CPSF7-223	ENST00000544669	IDI2-AS1	Q9NZ38	188 aa		10.78	□□□□□ -0.68
CPSF7-223	ENST00000544669	SLC25A10	Q9UBX3	287 aa	Predicted RBP	10.78	□□□□□ -0.68
CPSF7-223	ENST00000544669	ZMAT5	Q9UDW3	170 aa	Known RBP	10.78	□□□□□ -0.68
CPSF7-223	ENST00000544669	TP53TG5	Q9Y2B4	290 aa		10.78	□□□□□ -0.68
CPSF7-223	ENST00000544669	LSM4	Q9Y4Z0	139 aa	Known RBP	10.78	□□□□□ -0.68
CPSF7-223	ENST00000544669	EYS	Q5T1H1	3165 aa		10.78	□□□□□ -0.68
CPSF7-223	ENST00000544669	DNAJC13	O75165	2243 aa		10.77	□□□□□ -0.68
CPSF7-223	ENST00000544669	MDFIC2	A0A1B0GVS7	189 aa		10.77	□□□□□ -0.68
CPSF7-223	ENST00000544669	hADV38S2	A0JD32	116 aa		10.77	□□□□□ -0.68
CPSF7-223	ENST00000544669	PRSS46	E5RG02	174 aa		10.77	□□□□□ -0.68
CPSF7-223	ENST00000544669	HMGB3	O15347	200 aa	Known RBP	10.77	□□□□□ -0.68
CPSF7-223	ENST00000544669	PROP1	O75360	226 aa		10.77	□□□□□ -0.68
CPSF7-223	ENST00000544669	FABP4	P15090	132 aa		10.77	□□□□□ -0.68
CPSF7-223	ENST00000544669	TNFRSF1A	P19438	455 aa		10.77	□□□□□ -0.68
CPSF7-223	ENST00000544669	DEFA6	Q01524	100 aa		10.77	□□□□□ -0.68
CPSF7-223	ENST00000544669	LTC4S	Q16873	150 aa		10.77	□□□□□ -0.68
CPSF7-223	ENST00000544669	LINC01551	Q86U37	167 aa		10.77	□□□□□ -0.68
CPSF7-223	ENST00000544669		Q8N7P7	452 aa		10.77	□□□□□ -0.68
CPSF7-223	ENST00000544669	NUP37	Q8NFH4	326 aa		10.77	□□□□□ -0.68
CPSF7-223	ENST00000544669	SLC35E1	Q96K37	410 aa		10.77	□□□□□ -0.68
CPSF7-223	ENST00000544669	GGTLC1	Q9BX51	225 aa		10.77	□□□□□ -0.68
CPSF7-223	ENST00000544669	TMEM167B	Q9NRX6	74 aa		10.77	□□□□□ -0.68
CPSF7-223	ENST00000544669	TRAV20	A0A0B4J274	112 aa		10.77	□□□□□ -0.69
CPSF7-223	ENST00000544669		A0A1W2PPQ1	181 aa		10.77	□□□□□ -0.69
CPSF7-223	ENST00000544669	AREG	P15514	252 aa		10.77	□□□□□ -0.69
CPSF7-223	ENST00000544669	TNFAIP6	P98066	277 aa	Predicted RBP	10.77	□□□□□ -0.69
CPSF7-223	ENST00000544669	MEF2C	Q06413	473 aa	Predicted RBP	10.77	□□□□□ -0.69
CPSF7-223	ENST00000544669	JOSD1	Q15040	202 aa	Predicted RBP	10.77	□□□□□ -0.69
CPSF7-223	ENST00000544669	ACTL10	Q5JWF8	245 aa		10.77	□□□□□ -0.69
CPSF7-223	ENST00000544669		Q6ZS92	163 aa		10.77	□□□□□ -0.69
CPSF7-223	ENST00000544669	SSX9	Q7RTT3	188 aa		10.77	□□□□□ -0.69
CPSF7-223	ENST00000544669	PNKD	Q8N490	385 aa		10.77	□□□□□ -0.69
CPSF7-223	ENST00000544669	ZNF383	Q8NA42	475 aa		10.77	□□□□□ -0.69
CPSF7-223	ENST00000544669	RNF2	Q99496	336 aa		10.77	□□□□□ -0.69
CPSF7-223	ENST00000544669	HIST1H2BL	Q99880	126 aa		10.77	□□□□□ -0.69
CPSF7-223	ENST00000544669	GAL3ST2	Q9H3Q3	398 aa		10.77	□□□□□ -0.69
CPSF7-223	ENST00000544669	MS4A5	Q9H3V2	200 aa		10.77	□□□□□ -0.69
CPSF7-223	ENST00000544669	AHCTF1	Q8WYP5	2266 aa		10.76	□□□□□ -0.69
CPSF7-223	ENST00000544669	XKRY2	A2RUG3	117 aa		10.76	□□□□□ -0.69
CPSF7-223	ENST00000544669	NKX6-3	A6NJ46	265 aa		10.76	□□□□□ -0.69
CPSF7-223	ENST00000544669		C9JCJ5	164 aa		10.76	□□□□□ -0.69
CPSF7-223	ENST00000544669	SPRY3	O43610	288 aa		10.76	□□□□□ -0.69
CPSF7-223	ENST00000544669	TAS2R45	P59539	299 aa		10.76	□□□□□ -0.69
CPSF7-223	ENST00000544669	C17orf58	Q2M2W7	97 aa		10.76	□□□□□ -0.69
CPSF7-223	ENST00000544669	COX19	Q49B96	90 aa		10.76	□□□□□ -0.69
CPSF7-223	ENST00000544669	OR4A47	Q6IF82	309 aa		10.76	□□□□□ -0.69
CPSF7-223	ENST00000544669	ZNRF1	Q8ND25	227 aa		10.76	□□□□□ -0.69
CPSF7-223	ENST00000544669	OR5B3	Q8NH48	314 aa		10.76	□□□□□ -0.69
CPSF7-223	ENST00000544669	ITLN1	Q8WWA0	313 aa		10.76	□□□□□ -0.69
CPSF7-223	ENST00000544669	MGST2	Q99735	147 aa		10.76	□□□□□ -0.69
CPSF7-223	ENST00000544669	DCTN5	Q9BTE1	182 aa		10.76	□□□□□ -0.69
CPSF7-223	ENST00000544669	PLEKHA3	Q9HB20	300 aa		10.76	□□□□□ -0.69
CPSF7-223	ENST00000544669	SLC45A2	Q9UMX9	530 aa		10.76	□□□□□ -0.69
CPSF7-223	ENST00000544669	VCAN	P13611	3396 aa		10.75	□□□□□ -0.69
CPSF7-223	ENST00000544669	RRH	O14718	337 aa		10.75	□□□□□ -0.69
CPSF7-223	ENST00000544669	ATXN7	O15265	892 aa	Predicted RBP	10.75	□□□□□ -0.69
CPSF7-223	ENST00000544669	NDUFB4	O95168	129 aa		10.75	□□□□□ -0.69
CPSF7-223	ENST00000544669	GNB1	P62873	340 aa		10.75	□□□□□ -0.69
CPSF7-223	ENST00000544669	ESPL1	Q14674	2120 aa		10.75	□□□□□ -0.69
CPSF7-223	ENST00000544669	C4orf17	Q53FE4	359 aa		10.75	□□□□□ -0.69
CPSF7-223	ENST00000544669	RPL39P5	Q59GN2	51 aa		10.75	□□□□□ -0.69
CPSF7-223	ENST00000544669	CT45A1	Q5HYN5	189 aa		10.75	□□□□□ -0.69
CPSF7-223	ENST00000544669	TEX36	Q5VZQ5	186 aa		10.75	□□□□□ -0.69
CPSF7-223	ENST00000544669	STUM	Q69YW2	141 aa		10.75	□□□□□ -0.69
CPSF7-223	ENST00000544669	CT45A3	Q8NHU0	189 aa		10.75	□□□□□ -0.69
CPSF7-223	ENST00000544669	SFRP2	Q96HF1	295 aa		10.75	□□□□□ -0.69
CPSF7-223	ENST00000544669	PCGF1	Q9BSM1	259 aa		10.75	□□□□□ -0.69
CPSF7-223	ENST00000544669	ELOVL5	Q9NYP7	299 aa		10.75	□□□□□ -0.69
CPSF7-223	ENST00000544669	MED12L	Q86YW9	2145 aa		10.75	□□□□□ -0.69
CPSF7-223	ENST00000544669	TRAV38-1	A0A0B4J264	116 aa		10.74	□□□□□ -0.69
CPSF7-223	ENST00000544669	IL6R	P08887	468 aa	Predicted RBP	10.74	□□□□□ -0.69
CPSF7-223	ENST00000544669	ARL14EPL	P0DKL9	152 aa		10.74	□□□□□ -0.69
CPSF7-223	ENST00000544669	CEACAM8	P31997	349 aa	Predicted RBP	10.74	□□□□□ -0.69
CPSF7-223	ENST00000544669	ZNF134	P52741	427 aa		10.74	□□□□□ -0.69
CPSF7-223	ENST00000544669	LBH	Q53QV2	105 aa	Predicted RBP	10.74	□□□□□ -0.69
CPSF7-223	ENST00000544669	SPINK9	Q5DT21	86 aa		10.74	□□□□□ -0.69
CPSF7-223	ENST00000544669	FAM71F2	Q6NXP2	309 aa		10.74	□□□□□ -0.69
CPSF7-223	ENST00000544669	ZNF474	Q6S9Z5	364 aa	Predicted RBP	10.74	□□□□□ -0.69
CPSF7-223	ENST00000544669	TMEM108	Q6UXF1	575 aa		10.74	□□□□□ -0.69
CPSF7-223	ENST00000544669	ZNF788	Q6ZQV5	615 aa		10.74	□□□□□ -0.69
CPSF7-223	ENST00000544669	SEM1	Q6ZVN7	128 aa		10.74	□□□□□ -0.69
CPSF7-223	ENST00000544669	TMEM144	Q7Z5S9	345 aa		10.74	□□□□□ -0.69
CPSF7-223	ENST00000544669	OSR1	Q8TAX0	266 aa	Predicted RBP	10.74	□□□□□ -0.69
CPSF7-223	ENST00000544669	CACNG8	Q8WXS5	425 aa		10.74	□□□□□ -0.69
CPSF7-223	ENST00000544669	C11orf52	Q96A22	123 aa		10.74	□□□□□ -0.69
CPSF7-223	ENST00000544669	NOL4L	Q96MY1	436 aa	Predicted RBP	10.74	□□□□□ -0.69
CPSF7-223	ENST00000544669	BET1L	Q9NYM9	111 aa		10.74	□□□□□ -0.69
CPSF7-223	ENST00000544669	OR51B2	Q9Y5P1	312 aa		10.74	□□□□□ -0.69
CPSF7-223	ENST00000544669	LINC00312	Q9Y6C7	94 aa		10.74	□□□□□ -0.69
CPSF7-223	ENST00000544669	MED13	Q9UHV7	2174 aa		10.74	□□□□□ -0.69
CPSF7-223	ENST00000544669	SAA2-SAA4	A0A096LPE2	208 aa		10.74	□□□□□ -0.69
CPSF7-223	ENST00000544669	SPAAR	A0A1B0GVQ0	90 aa		10.74	□□□□□ -0.69
CPSF7-223	ENST00000544669	INS-IGF2	F8WCM5	200 aa		10.74	□□□□□ -0.69
CPSF7-223	ENST00000544669	SAA2	P0DJI9	122 aa	Predicted RBP	10.74	□□□□□ -0.69
CPSF7-223	ENST00000544669	GCHFR	P30047	84 aa		10.74	□□□□□ -0.69
CPSF7-223	ENST00000544669	CNN1	P51911	297 aa	Known RBP	10.74	□□□□□ -0.69
CPSF7-223	ENST00000544669	PRCD	Q00LT1	54 aa		10.74	□□□□□ -0.69
CPSF7-223	ENST00000544669	C2orf83	Q53S99	150 aa		10.74	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms