RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585	NEK6	Q9HC98	313 aa		4.57	□□□□□ -1.68
CPSF7-222	ENST00000544585	SDF2L1	Q9HCN8	221 aa		4.57	□□□□□ -1.68
CPSF7-222	ENST00000544585	TAS2R1	Q9NYW7	299 aa		4.57	□□□□□ -1.68
CPSF7-222	ENST00000544585	SAMHD1	Q9Y3Z3	626 aa	Known RBP	4.57	□□□□□ -1.68
CPSF7-222	ENST00000544585	TNC	P24821	2201 aa		4.57	□□□□□ -1.68
CPSF7-222	ENST00000544585	MEIKIN	A0A087WXM9	373 aa		4.56	□□□□□ -1.68
CPSF7-222	ENST00000544585	SNTN	A6NMZ2	147 aa		4.56	□□□□□ -1.68
CPSF7-222	ENST00000544585	ZNF670-ZNF695	F2Z2N8	137 aa		4.56	□□□□□ -1.68
CPSF7-222	ENST00000544585		H0Y980	276 aa		4.56	□□□□□ -1.68
CPSF7-222	ENST00000544585	FKBP6	O75344	327 aa		4.56	□□□□□ -1.68
CPSF7-222	ENST00000544585	IGHV3-7	P01780	117 aa		4.56	□□□□□ -1.68
CPSF7-222	ENST00000544585	HSPB1	P04792	205 aa	Known RBP	4.56	□□□□□ -1.68
CPSF7-222	ENST00000544585	ATF1	P18846	271 aa		4.56	□□□□□ -1.68
CPSF7-222	ENST00000544585	IL3RA	P26951	378 aa		4.56	□□□□□ -1.68
CPSF7-222	ENST00000544585	KCNJ3	P48549	501 aa		4.56	□□□□□ -1.68
CPSF7-222	ENST00000544585	NDUFV3	P56181	108 aa	Known RBP	4.56	□□□□□ -1.68
CPSF7-222	ENST00000544585	SEC61G	P60059	68 aa		4.56	□□□□□ -1.68
CPSF7-222	ENST00000544585	CXCR4	P61073	352 aa		4.56	□□□□□ -1.68
CPSF7-222	ENST00000544585	TMEM267	Q0VDI3	215 aa	Predicted RBP	4.56	□□□□□ -1.68
CPSF7-222	ENST00000544585		Q3ZCU0	254 aa		4.56	□□□□□ -1.68
CPSF7-222	ENST00000544585	ZFP69	Q49AA0	526 aa		4.56	□□□□□ -1.68
CPSF7-222	ENST00000544585		Q6P435	159 aa		4.56	□□□□□ -1.68
CPSF7-222	ENST00000544585	UTS2B	Q765I0	119 aa		4.56	□□□□□ -1.68
CPSF7-222	ENST00000544585	SAXO1	Q8IYX7	474 aa		4.56	□□□□□ -1.68
CPSF7-222	ENST00000544585	RDH10	Q8IZV5	341 aa		4.56	□□□□□ -1.68
CPSF7-222	ENST00000544585	LINC00311	Q8N616	119 aa		4.56	□□□□□ -1.68
CPSF7-222	ENST00000544585	C8orf31	Q8N9H6	132 aa		4.56	□□□□□ -1.68
CPSF7-222	ENST00000544585	OR51T1	Q8NGJ9	327 aa		4.56	□□□□□ -1.68
CPSF7-222	ENST00000544585	TOLLIP	Q9H0E2	274 aa		4.56	□□□□□ -1.68
CPSF7-222	ENST00000544585	VCX3B	Q9H321	246 aa		4.56	□□□□□ -1.68
CPSF7-222	ENST00000544585	GNB4	Q9HAV0	340 aa		4.56	□□□□□ -1.68
CPSF7-222	ENST00000544585	CALY	Q9NYX4	217 aa		4.56	□□□□□ -1.68
CPSF7-222	ENST00000544585	CACNG5	Q9UF02	275 aa		4.56	□□□□□ -1.68
CPSF7-222	ENST00000544585	ZNF107	Q9UII5	783 aa	Predicted RBP	4.56	□□□□□ -1.68
CPSF7-222	ENST00000544585	WSB1	Q9Y6I7	421 aa		4.56	□□□□□ -1.68
CPSF7-222	ENST00000544585	IGHV3-72	A0A0B4J1Y9	119 aa		4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	TEX48	A0A1B0GUV7	120 aa		4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	C12orf77	C9JDV5	145 aa		4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585		K7EQG2	157 aa		4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	CASQ2	O14958	399 aa	Predicted RBP	4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	SULT1C4	O75897	302 aa		4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	LY6G6C	O95867	125 aa		4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	IGLV1-51	P01701	117 aa		4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	AMBP	P02760	352 aa		4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	MRPL3	P09001	348 aa	Known RBP	4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	SNRPC	P09234	159 aa	Known RBP	4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	OCM2	P0CE71	109 aa		4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	OCM	P0CE72	109 aa	Predicted RBP	4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	ANXA8	P13928	327 aa		4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	GAL	P22466	123 aa		4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	CD40LG	P29965	261 aa		4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	GNG10	P50151	68 aa		4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	PAX5	Q02548	391 aa		4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	RAB40B	Q12829	278 aa		4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	UTF1	Q5T230	341 aa		4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	LINC00242	Q5T6M2	205 aa		4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	TMEM244	Q5VVB8	128 aa		4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	FAHD1	Q6P587	224 aa		4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	SLC35F2	Q8IXU6	374 aa		4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	TCTEX1D1	Q8N7M0	179 aa		4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	YIPF7	Q8N8F6	280 aa		4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	BBS1	Q8NFJ9	593 aa		4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	RFESD	Q8TAC1	157 aa		4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	LEAP2	Q969E1	77 aa		4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	OR5B12	Q96R08	314 aa		4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	CNN2	Q99439	309 aa	Known RBP	4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	HSPB9	Q9BQS6	159 aa		4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	CHRDL1	Q9BU40	450 aa		4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	TMED9	Q9BVK6	235 aa		4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	CLN6	Q9NWW5	311 aa		4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	TVP23B	Q9NYZ1	205 aa		4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	ZNF221	Q9UK13	617 aa		4.55	□□□□□ -1.68
CPSF7-222	ENST00000544585	TRAV41	A0A0B4J266	112 aa		4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585	IGKV1-9	A0A0C4DH69	117 aa		4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585	IGKV1-12	A0A0C4DH73	117 aa		4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585		A0A1W2PPE3	182 aa		4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585	METTL15	A6NJ78	407 aa		4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585		G3V318	75 aa		4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585		H0YJX3	145 aa		4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585	GNGT2	O14610	69 aa		4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585	MAGEB4	O15481	346 aa	Predicted RBP	4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585	RPP14	O95059	124 aa	Known RBP	4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585	CA1	P00915	261 aa	Predicted RBP	4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585	IGKV1D-12	P01611	117 aa		4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585	HLA-DRB1	P01911	266 aa		4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585	LGALS1	P09382	135 aa	Known RBP	4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585	GLP1R	P43220	463 aa		4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585	P2RY1	P47900	373 aa		4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585	REG1B	P48304	166 aa		4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585	CDK5R1	Q15078	307 aa		4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585	LTC4S	Q16873	150 aa		4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585	CNPY1	Q3B7I2	92 aa		4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585	C1orf146	Q5VVC0	180 aa		4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585	RNLS	Q5VYX0	342 aa		4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585	ELP2	Q6IA86	826 aa		4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585	PRSS48	Q7RTY5	328 aa		4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585	GTSCR1	Q86UQ5	136 aa		4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585	NR2C2AP	Q86WQ0	139 aa		4.54	□□□□□ -1.68
CPSF7-222	ENST00000544585	DHRSX	Q8N5I4	330 aa		4.54	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms