RNA–Protein interactions for RNA: ENST00000544425.2

SPDEF-202, Transcript of SAM pointed domain containing ETS transcription factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SPDEF, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEF-202ENST00000544425 USF3Q68DE3 2245 aa13.05□□□□□ -0.32
SPDEF-202ENST00000544425 C15orf62A8K5M9 175 aa13.05□□□□□ -0.32
SPDEF-202ENST00000544425 IGLV1-47P01700 117 aa13.05□□□□□ -0.32
SPDEF-202ENST00000544425 SNCAP37840 140 aa13.05□□□□□ -0.32
SPDEF-202ENST00000544425 ZNF616Q08AN1 781 aa13.05□□□□□ -0.32
SPDEF-202ENST00000544425 VWC2Q2TAL6 325 aa13.05□□□□□ -0.32
SPDEF-202ENST00000544425 AKR1C8PQ5T2L2 129 aa13.05□□□□□ -0.32
SPDEF-202ENST00000544425 PDPNQ86YL7 162 aa13.05□□□□□ -0.32
SPDEF-202ENST00000544425 BEND2Q8NDZ0 799 aa13.05□□□□□ -0.32
SPDEF-202ENST00000544425 FAM213BQ8TBF2 198 aa13.05□□□□□ -0.32
SPDEF-202ENST00000544425 LHX4Q969G2 390 aa13.05□□□□□ -0.32
SPDEF-202ENST00000544425 TMEM147Q9BVK8 224 aa13.05□□□□□ -0.32
SPDEF-202ENST00000544425 FKBP11Q9NYL4 201 aa13.05□□□□□ -0.32
SPDEF-202ENST00000544425 COL6A6A6NMZ7 2263 aa13.05□□□□□ -0.32
SPDEF-202ENST00000544425 IGHV2-26A0A0B4J1V2 119 aa13.04□□□□□ -0.32
SPDEF-202ENST00000544425 CD5P06127 495 aa13.04□□□□□ -0.32
SPDEF-202ENST00000544425 LIPFP07098 398 aa13.04□□□□□ -0.32
SPDEF-202ENST00000544425 MC5RP33032 325 aa13.04□□□□□ -0.32
SPDEF-202ENST00000544425 SRSF3P84103 164 aaKnown RBP13.04□□□□□ -0.32
SPDEF-202ENST00000544425 BTN1A1Q13410 526 aa13.04□□□□□ -0.32
SPDEF-202ENST00000544425 SPINK9Q5DT21 86 aa13.04□□□□□ -0.32
SPDEF-202ENST00000544425 OR4C13Q8NGP0 309 aa13.04□□□□□ -0.32
SPDEF-202ENST00000544425 TAF15Q92804 592 aaKnown RBP eCLIP13.04□□□□□ -0.32
SPDEF-202ENST00000544425 FLYWCH2Q96CP2 140 aaKnown RBP13.04□□□□□ -0.32
SPDEF-202ENST00000544425 UBTD1Q9HAC8 227 aa13.04□□□□□ -0.32
SPDEF-202ENST00000544425 HEYLQ9NQ87 328 aaPredicted RBP13.04□□□□□ -0.32
SPDEF-202ENST00000544425 TIMM9Q9Y5J7 89 aa13.04□□□□□ -0.32
SPDEF-202ENST00000544425 RNASEK-C17orf49H0YIS7 233 aa13.04□□□□□ -0.32
SPDEF-202ENST00000544425 DVL1P1P54792 670 aaPredicted RBP13.04□□□□□ -0.32
SPDEF-202ENST00000544425 TGIF2LXQ8IUE1 241 aa13.04□□□□□ -0.32
SPDEF-202ENST00000544425 LFNGQ8NES3 379 aa13.04□□□□□ -0.32
SPDEF-202ENST00000544425 GGACTQ9BVM4 153 aa13.04□□□□□ -0.32
SPDEF-202ENST00000544425 CLEC7AQ9BXN2 247 aa13.04□□□□□ -0.32
SPDEF-202ENST00000544425 UQCC1Q9NVA1 299 aa13.04□□□□□ -0.32
SPDEF-202ENST00000544425 BTBD17A6NE02 478 aa13.03□□□□□ -0.32
SPDEF-202ENST00000544425 H7C2Y5 167 aa13.03□□□□□ -0.32
SPDEF-202ENST00000544425 KBTBD11O94819 623 aa13.03□□□□□ -0.32
SPDEF-202ENST00000544425 RAB13P51153 203 aa13.03□□□□□ -0.32
SPDEF-202ENST00000544425 EFNA4P52798 201 aa13.03□□□□□ -0.32
SPDEF-202ENST00000544425 HLA-DRB5Q30154 266 aa13.03□□□□□ -0.32
SPDEF-202ENST00000544425 C10orf91Q5T1B1 145 aa13.03□□□□□ -0.32
SPDEF-202ENST00000544425 SP5Q6BEB4 398 aaPredicted RBP13.03□□□□□ -0.32
SPDEF-202ENST00000544425 NARS2Q96I59 477 aaKnown RBP13.03□□□□□ -0.32
SPDEF-202ENST00000544425 TREM1Q9NP99 234 aa13.03□□□□□ -0.32
SPDEF-202ENST00000544425 FBXO7Q9Y3I1 522 aa13.03□□□□□ -0.32
SPDEF-202ENST00000544425 OR51B2Q9Y5P1 312 aa13.03□□□□□ -0.32
SPDEF-202ENST00000544425 IFNA10P01566 189 aa13.02□□□□□ -0.32
SPDEF-202ENST00000544425 MDKP21741 143 aaPredicted RBP13.02□□□□□ -0.32
SPDEF-202ENST00000544425 CDKN1AP38936 164 aa13.02□□□□□ -0.32
SPDEF-202ENST00000544425 REG1BP48304 166 aa13.02□□□□□ -0.32
SPDEF-202ENST00000544425 TLE4Q04727 773 aa13.02□□□□□ -0.32
SPDEF-202ENST00000544425 DIAPH2-AS1Q14236 149 aa13.02□□□□□ -0.32
SPDEF-202ENST00000544425 OR4A5Q8NH83 315 aa13.02□□□□□ -0.32
SPDEF-202ENST00000544425 RSG1Q9BU20 258 aa13.02□□□□□ -0.32
SPDEF-202ENST00000544425 WASHC3Q9Y3C0 194 aa13.02□□□□□ -0.32
SPDEF-202ENST00000544425 DIDO1Q9BTC0 2240 aaKnown RBP13.02□□□□□ -0.33
SPDEF-202ENST00000544425 A0A1B0GW64 132 aa13.02□□□□□ -0.33
SPDEF-202ENST00000544425 C22orf46C9J442 243 aa13.02□□□□□ -0.33
SPDEF-202ENST00000544425 H2AFB1P0C5Y9 115 aa13.02□□□□□ -0.33
SPDEF-202ENST00000544425 SAA1P0DJI8 122 aaPredicted RBP13.02□□□□□ -0.33
SPDEF-202ENST00000544425 GPR6P46095 362 aaPredicted RBP13.02□□□□□ -0.33
SPDEF-202ENST00000544425 HOXA1P49639 335 aaPredicted RBP13.02□□□□□ -0.33
SPDEF-202ENST00000544425 AKR1C1Q04828 323 aa13.02□□□□□ -0.33
SPDEF-202ENST00000544425 VSTM2AQ8TAG5 236 aa13.02□□□□□ -0.33
SPDEF-202ENST00000544425 HARBI1Q96MB7 349 aa13.02□□□□□ -0.33
SPDEF-202ENST00000544425 SSBP3Q9BWW4 388 aaPredicted RBP13.02□□□□□ -0.33
SPDEF-202ENST00000544425 SCRT1Q9BWW7 348 aa13.02□□□□□ -0.33
SPDEF-202ENST00000544425 NBASA2RRP1 2371 aa13.01□□□□□ -0.33
SPDEF-202ENST00000544425 UBE2L5PA0A1B0GUS4 154 aa13.01□□□□□ -0.33
SPDEF-202ENST00000544425 BUB1B-PAK6H3BSN5 160 aa13.01□□□□□ -0.33
SPDEF-202ENST00000544425 M0R1W7 72 aa13.01□□□□□ -0.33
SPDEF-202ENST00000544425 OVOL3O00110 214 aa13.01□□□□□ -0.33
SPDEF-202ENST00000544425 DNASE2O00115 360 aaPredicted RBP13.01□□□□□ -0.33
SPDEF-202ENST00000544425 AGPAT2O15120 278 aa13.01□□□□□ -0.33
SPDEF-202ENST00000544425 APOC3P02656 99 aa13.01□□□□□ -0.33
SPDEF-202ENST00000544425 ADCYAP1P18509 176 aa13.01□□□□□ -0.33
SPDEF-202ENST00000544425 ATP5IP56385 69 aaPredicted RBP13.01□□□□□ -0.33
SPDEF-202ENST00000544425 RAB11AP62491 216 aa13.01□□□□□ -0.33
SPDEF-202ENST00000544425 PRCDQ00LT1 54 aa13.01□□□□□ -0.33
SPDEF-202ENST00000544425 SPSB3Q6PJ21 355 aa13.01□□□□□ -0.33
SPDEF-202ENST00000544425 OR5B3Q8NH48 314 aa13.01□□□□□ -0.33
SPDEF-202ENST00000544425 SEC11CQ9BY50 192 aa13.01□□□□□ -0.33
SPDEF-202ENST00000544425 ENY2Q9NPA8 101 aa13.01□□□□□ -0.33
SPDEF-202ENST00000544425 PRELID1Q9Y255 219 aa13.01□□□□□ -0.33
SPDEF-202ENST00000544425 LOC105371242A0A075B767 164 aa13□□□□□ -0.33
SPDEF-202ENST00000544425 TRAV1-1A0A0B4J248 108 aa13□□□□□ -0.33
SPDEF-202ENST00000544425 USF1P22415 310 aaPredicted RBP13□□□□□ -0.33
SPDEF-202ENST00000544425 LGALS7P47929 136 aa13□□□□□ -0.33
SPDEF-202ENST00000544425 PEA15Q15121 130 aa13□□□□□ -0.33
SPDEF-202ENST00000544425 ETV3LQ6ZN32 361 aa13□□□□□ -0.33
SPDEF-202ENST00000544425 SMDT1Q9H4I9 107 aa13□□□□□ -0.33
SPDEF-202ENST00000544425 CARHSP1Q9Y2V2 147 aaKnown RBP13□□□□□ -0.33
SPDEF-202ENST00000544425 AMMECR1Q9Y4X0 333 aaPredicted RBP13□□□□□ -0.33
SPDEF-202ENST00000544425 TEX50A0A1B0GTY4 177 aa12.99□□□□□ -0.33
SPDEF-202ENST00000544425 PRSS46E5RG02 174 aa12.99□□□□□ -0.33
SPDEF-202ENST00000544425 RRHO14718 337 aa12.99□□□□□ -0.33
SPDEF-202ENST00000544425 HBE1P02100 147 aa12.99□□□□□ -0.33
SPDEF-202ENST00000544425 RPS16P62249 146 aaKnown RBP12.99□□□□□ -0.33
SPDEF-202ENST00000544425 GUK1Q16774 197 aa12.99□□□□□ -0.33
SPDEF-202ENST00000544425 C1orf122Q6ZSJ8 110 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms