RNA–Protein interactions for RNA: ENST00000542328.5

ABCB8-222, Transcript of ATP binding cassette subfamily B member 8, human

TSL 2 BASIC

Gene ABCB8, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCB8-222	ENST00000542328	WDFY1	Q8IWB7	410 aa		10.35	□□□□□ -0.75
ABCB8-222	ENST00000542328	TMEM167B	Q9NRX6	74 aa		10.35	□□□□□ -0.75
ABCB8-222	ENST00000542328	COA4	Q9NYJ1	87 aa		10.35	□□□□□ -0.75
ABCB8-222	ENST00000542328	RNF24	Q9Y225	148 aa		10.35	□□□□□ -0.75
ABCB8-222	ENST00000542328	IGKV1-27	A0A075B6S5	117 aa		10.35	□□□□□ -0.75
ABCB8-222	ENST00000542328	IGHV3-21	A0A0B4J1V1	117 aa		10.35	□□□□□ -0.75
ABCB8-222	ENST00000542328	MARCH11	A6NNE9	402 aa		10.35	□□□□□ -0.75
ABCB8-222	ENST00000542328	CEACAM18	A8MTB9	384 aa		10.35	□□□□□ -0.75
ABCB8-222	ENST00000542328	MLNR	O43193	412 aa		10.35	□□□□□ -0.75
ABCB8-222	ENST00000542328	S1PR2	O95136	353 aa		10.35	□□□□□ -0.75
ABCB8-222	ENST00000542328	TGFA	P01135	160 aa		10.35	□□□□□ -0.75
ABCB8-222	ENST00000542328	SPP1	P10451	314 aa		10.35	□□□□□ -0.75
ABCB8-222	ENST00000542328	ZNF146	Q15072	292 aa		10.35	□□□□□ -0.75
ABCB8-222	ENST00000542328	PLPPR1	Q8TBJ4	325 aa		10.35	□□□□□ -0.75
ABCB8-222	ENST00000542328	MANBAL	Q9NQG1	85 aa		10.35	□□□□□ -0.75
ABCB8-222	ENST00000542328	SPG11	Q96JI7	2443 aa		10.35	□□□□□ -0.75
ABCB8-222	ENST00000542328	NOTCH3	Q9UM47	2321 aa		10.35	□□□□□ -0.75
ABCB8-222	ENST00000542328	SERTM2	A0A1B0GWG4	89 aa		10.35	□□□□□ -0.75
ABCB8-222	ENST00000542328	GOSR1	O95249	250 aa		10.35	□□□□□ -0.75
ABCB8-222	ENST00000542328	GALR1	P47211	349 aa		10.35	□□□□□ -0.75
ABCB8-222	ENST00000542328	LGALS7	P47929	136 aa		10.35	□□□□□ -0.75
ABCB8-222	ENST00000542328	SERF2	P84101	59 aa		10.35	□□□□□ -0.75
ABCB8-222	ENST00000542328	OR4X1	Q8NH49	305 aa		10.35	□□□□□ -0.75
ABCB8-222	ENST00000542328	RBKS	Q9H477	322 aa		10.35	□□□□□ -0.75
ABCB8-222	ENST00000542328	ZNF503-AS2	A6NEH8	195 aa		10.35	□□□□□ -0.75
ABCB8-222	ENST00000542328	MRPL30	Q8TCC3	161 aa	Known RBP	10.35	□□□□□ -0.75
ABCB8-222	ENST00000542328	NPVF	Q9HCQ7	196 aa		10.35	□□□□□ -0.75
ABCB8-222	ENST00000542328		M0QZ24	198 aa		10.34	□□□□□ -0.75
ABCB8-222	ENST00000542328	DEFA6	Q01524	100 aa		10.34	□□□□□ -0.75
ABCB8-222	ENST00000542328	PNRC1	Q12796	327 aa	Predicted RBP	10.34	□□□□□ -0.75
ABCB8-222	ENST00000542328	AARD	Q4LEZ3	155 aa		10.34	□□□□□ -0.75
ABCB8-222	ENST00000542328	FAM210B	Q96KR6	192 aa		10.34	□□□□□ -0.75
ABCB8-222	ENST00000542328	DCTN5	Q9BTE1	182 aa		10.34	□□□□□ -0.75
ABCB8-222	ENST00000542328	TRAV24	A0A0B4J272	114 aa		10.34	□□□□□ -0.75
ABCB8-222	ENST00000542328	RPL27A	P46776	148 aa	Known RBP	10.34	□□□□□ -0.75
ABCB8-222	ENST00000542328	OR4C12	Q96R67	309 aa		10.34	□□□□□ -0.75
ABCB8-222	ENST00000542328	LYRM2	Q9NU23	88 aa	Predicted RBP	10.34	□□□□□ -0.75
ABCB8-222	ENST00000542328	DPM3	Q9P2X0	92 aa		10.34	□□□□□ -0.75
ABCB8-222	ENST00000542328	F12	P00748	615 aa	Predicted RBP	10.34	□□□□□ -0.75
ABCB8-222	ENST00000542328	CD8A	P01732	235 aa		10.34	□□□□□ -0.75
ABCB8-222	ENST00000542328	DHRS7B	Q6IAN0	325 aa	Predicted RBP	10.34	□□□□□ -0.75
ABCB8-222	ENST00000542328	PCSK4	Q6UW60	755 aa		10.34	□□□□□ -0.75
ABCB8-222	ENST00000542328	NOTCH2	Q04721	2471 aa		10.33	□□□□□ -0.75
ABCB8-222	ENST00000542328	PIEZO2	Q9H5I5	2752 aa		10.33	□□□□□ -0.76
ABCB8-222	ENST00000542328	RTN4RL2	Q86UN3	420 aa		10.33	□□□□□ -0.76
ABCB8-222	ENST00000542328	PDPN	Q86YL7	162 aa		10.33	□□□□□ -0.76
ABCB8-222	ENST00000542328	IL22RA2	Q969J5	263 aa		10.33	□□□□□ -0.76
ABCB8-222	ENST00000542328	RNF2	Q99496	336 aa		10.33	□□□□□ -0.76
ABCB8-222	ENST00000542328	C7orf69	Q9H7B7	122 aa		10.33	□□□□□ -0.76
ABCB8-222	ENST00000542328	TMEM140	Q9NV12	185 aa		10.33	□□□□□ -0.76
ABCB8-222	ENST00000542328	NAT8	Q9UHE5	227 aa		10.33	□□□□□ -0.76
ABCB8-222	ENST00000542328	MPZ	P25189	248 aa		10.33	□□□□□ -0.76
ABCB8-222	ENST00000542328	TNFRSF9	Q07011	255 aa		10.33	□□□□□ -0.76
ABCB8-222	ENST00000542328	GAMT	Q14353	236 aa		10.33	□□□□□ -0.76
ABCB8-222	ENST00000542328	RTBDN	Q9BSG5	229 aa	Predicted RBP	10.33	□□□□□ -0.76
ABCB8-222	ENST00000542328	RPL8	P62917	257 aa	Known RBP	10.33	□□□□□ -0.76
ABCB8-222	ENST00000542328	AUP1	Q9Y679	476 aa		10.33	□□□□□ -0.76
ABCB8-222	ENST00000542328		H3BQ15	152 aa		10.33	□□□□□ -0.76
ABCB8-222	ENST00000542328	SEM1	Q6ZVN7	128 aa		10.33	□□□□□ -0.76
ABCB8-222	ENST00000542328	MMD2	Q8IY49	270 aa		10.33	□□□□□ -0.76
ABCB8-222	ENST00000542328	VKORC1L1	Q8N0U8	176 aa		10.33	□□□□□ -0.76
ABCB8-222	ENST00000542328	GALNT14	Q96FL9	552 aa		10.33	□□□□□ -0.76
ABCB8-222	ENST00000542328	TRAPPC1	Q9Y5R8	145 aa		10.33	□□□□□ -0.76
ABCB8-222	ENST00000542328	FREM1	Q5H8C1	2179 aa		10.32	□□□□□ -0.76
ABCB8-222	ENST00000542328	MSGN1	A6NI15	193 aa		10.32	□□□□□ -0.76
ABCB8-222	ENST00000542328	SLC25A17	O43808	307 aa		10.32	□□□□□ -0.76
ABCB8-222	ENST00000542328	WISP2	O76076	250 aa		10.32	□□□□□ -0.76
ABCB8-222	ENST00000542328	CCL3L1	P16619	93 aa		10.32	□□□□□ -0.76
ABCB8-222	ENST00000542328	DLK1	P80370	383 aa		10.32	□□□□□ -0.76
ABCB8-222	ENST00000542328	RSPO1	Q2MKA7	263 aa	Predicted RBP	10.32	□□□□□ -0.76
ABCB8-222	ENST00000542328	ZNF497	Q6ZNH5	498 aa		10.32	□□□□□ -0.76
ABCB8-222	ENST00000542328	H1FOO	Q8IZA3	346 aa	Predicted RBP	10.32	□□□□□ -0.76
ABCB8-222	ENST00000542328	TMEM18	Q96B42	140 aa		10.32	□□□□□ -0.76
ABCB8-222	ENST00000542328	MPTX1	A8MV57	137 aa		10.32	□□□□□ -0.76
ABCB8-222	ENST00000542328	FAM90A26	D6RGX4	464 aa		10.32	□□□□□ -0.76
ABCB8-222	ENST00000542328	S100A8	P05109	93 aa		10.32	□□□□□ -0.76
ABCB8-222	ENST00000542328	FAM157C	P0CG43	387 aa		10.32	□□□□□ -0.76
ABCB8-222	ENST00000542328	FAM166A	Q6J272	317 aa		10.32	□□□□□ -0.76
ABCB8-222	ENST00000542328	HCP5	Q6MZN7	132 aa		10.32	□□□□□ -0.76
ABCB8-222	ENST00000542328	TAF15	Q92804	592 aa	Known RBP eCLIP	10.32	□□□□□ -0.76
ABCB8-222	ENST00000542328	FAM103A1	Q9BTL3	118 aa	Known RBP	10.32	□□□□□ -0.76
ABCB8-222	ENST00000542328	GAR1	Q9NY12	217 aa	Known RBP	10.32	□□□□□ -0.76
ABCB8-222	ENST00000542328	NAT8B	Q9UHF3	227 aa		10.32	□□□□□ -0.76
ABCB8-222	ENST00000542328	SNRPC	P09234	159 aa	Known RBP	10.32	□□□□□ -0.76
ABCB8-222	ENST00000542328	EFNB3	Q15768	340 aa		10.32	□□□□□ -0.76
ABCB8-222	ENST00000542328	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	10.32	□□□□□ -0.76
ABCB8-222	ENST00000542328	ANKRD11	Q6UB99	2663 aa	Predicted RBP	10.32	□□□□□ -0.76
ABCB8-222	ENST00000542328	GATC	O43716	136 aa	Known RBP	10.31	□□□□□ -0.76
ABCB8-222	ENST00000542328	OR10J1	P30954	320 aa		10.31	□□□□□ -0.76
ABCB8-222	ENST00000542328	HSPE1	P61604	102 aa	Known RBP	10.31	□□□□□ -0.76
ABCB8-222	ENST00000542328	SNRPE	P62304	92 aa	Known RBP	10.31	□□□□□ -0.76
ABCB8-222	ENST00000542328	ADORA2A-AS1	P86434	159 aa		10.31	□□□□□ -0.76
ABCB8-222	ENST00000542328	KHDC3L	Q587J8	217 aa		10.31	□□□□□ -0.76
ABCB8-222	ENST00000542328	SIGLECL1	Q8N7X8	197 aa		10.31	□□□□□ -0.76
ABCB8-222	ENST00000542328	LSM10	Q969L4	123 aa	Known RBP	10.31	□□□□□ -0.76
ABCB8-222	ENST00000542328	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	10.31	□□□□□ -0.76
ABCB8-222	ENST00000542328	PXMP4	Q9Y6I8	212 aa		10.31	□□□□□ -0.76
ABCB8-222	ENST00000542328	NUP210L	Q5VU65	1888 aa		10.31	□□□□□ -0.76
ABCB8-222	ENST00000542328	C10orf113	Q5VZT2	155 aa		10.31	□□□□□ -0.76
ABCB8-222	ENST00000542328	ZNF324B	Q6AW86	544 aa	Predicted RBP	10.31	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms