RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 FCGR3BO75015 233 aa11.57□□□□□ -0.56
RTN3-211ENST00000542238 GNB3P16520 340 aa11.57□□□□□ -0.56
RTN3-211ENST00000542238 ARFRP1Q13795 201 aa11.57□□□□□ -0.56
RTN3-211ENST00000542238 C10orf55Q5SWW7 151 aa11.57□□□□□ -0.56
RTN3-211ENST00000542238 HES5Q5TA89 166 aa11.57□□□□□ -0.56
RTN3-211ENST00000542238 TMEM61Q8N0U2 210 aa11.57□□□□□ -0.56
RTN3-211ENST00000542238 FCGR1BQ92637 280 aa11.57□□□□□ -0.56
RTN3-211ENST00000542238 OVOL2Q9BRP0 275 aa11.57□□□□□ -0.56
RTN3-211ENST00000542238 OR51E2Q9H255 320 aa11.57□□□□□ -0.56
RTN3-211ENST00000542238 PLECQ15149 4684 aaKnown RBP11.56□□□□□ -0.56
RTN3-211ENST00000542238 NUPR2A6NF83 97 aa11.56□□□□□ -0.56
RTN3-211ENST00000542238 HMX3A6NHT5 357 aa11.56□□□□□ -0.56
RTN3-211ENST00000542238 NPIPB5A8MRT5 1133 aa11.56□□□□□ -0.56
RTN3-211ENST00000542238 DHFRP00374 187 aa11.56□□□□□ -0.56
RTN3-211ENST00000542238 PLA2G7Q13093 441 aa11.56□□□□□ -0.56
RTN3-211ENST00000542238 PMS2P11Q13670 270 aa11.56□□□□□ -0.56
RTN3-211ENST00000542238 OR4A47Q6IF82 309 aa11.56□□□□□ -0.56
RTN3-211ENST00000542238 CLEC19AQ6UXS0 136 aa11.56□□□□□ -0.56
RTN3-211ENST00000542238 KCTD9Q7L273 389 aa11.56□□□□□ -0.56
RTN3-211ENST00000542238 CLVS1Q8IUQ0 354 aaPredicted RBP11.56□□□□□ -0.56
RTN3-211ENST00000542238 ZNF645Q8N7E2 425 aa11.56□□□□□ -0.56
RTN3-211ENST00000542238 VSTM2AQ8TAG5 236 aa11.56□□□□□ -0.56
RTN3-211ENST00000542238 CACNG8Q8WXS5 425 aa11.56□□□□□ -0.56
RTN3-211ENST00000542238 SELENOKQ9Y6D0 94 aa11.56□□□□□ -0.56
RTN3-211ENST00000542238 ALMS1Q8TCU4 4167 aa11.56□□□□□ -0.56
RTN3-211ENST00000542238 METTL21EPA6NDL7 271 aa11.55□□□□□ -0.56
RTN3-211ENST00000542238 J3QRK9 145 aa11.55□□□□□ -0.56
RTN3-211ENST00000542238 MFNGO00587 321 aa11.55□□□□□ -0.56
RTN3-211ENST00000542238 SLC22A5O76082 557 aa11.55□□□□□ -0.56
RTN3-211ENST00000542238 SCAF4O95104 1147 aaKnown RBP11.55□□□□□ -0.56
RTN3-211ENST00000542238 NDUFB8O95169 186 aa11.55□□□□□ -0.56
RTN3-211ENST00000542238 IGHV3-23P01764 117 aa11.55□□□□□ -0.56
RTN3-211ENST00000542238 HIST1H1DP16402 221 aaKnown RBP11.55□□□□□ -0.56
RTN3-211ENST00000542238 CD36P16671 472 aa11.55□□□□□ -0.56
RTN3-211ENST00000542238 RPL27AP46776 148 aaKnown RBP11.55□□□□□ -0.56
RTN3-211ENST00000542238 OR2B11Q5JQS5 317 aa11.55□□□□□ -0.56
RTN3-211ENST00000542238 ZNF773Q6PK81 442 aa11.55□□□□□ -0.56
RTN3-211ENST00000542238 Q6ZS49 121 aa11.55□□□□□ -0.56
RTN3-211ENST00000542238 UXS1Q8NBZ7 420 aa11.55□□□□□ -0.56
RTN3-211ENST00000542238 EEF1AKMT3Q96AZ1 226 aa11.55□□□□□ -0.56
RTN3-211ENST00000542238 FYTTD1Q96QD9 318 aaKnown RBP11.55□□□□□ -0.56
RTN3-211ENST00000542238 OR2A7Q96R45 310 aa11.55□□□□□ -0.56
RTN3-211ENST00000542238 ACOT13Q9NPJ3 140 aa11.55□□□□□ -0.56
RTN3-211ENST00000542238 SLC2A9Q9NRM0 540 aa11.55□□□□□ -0.56
RTN3-211ENST00000542238 MLXQ9UH92 298 aa11.55□□□□□ -0.56
RTN3-211ENST00000542238 TMEM213A2RRL7 107 aa11.54□□□□□ -0.56
RTN3-211ENST00000542238 A8MWP6 167 aa11.54□□□□□ -0.56
RTN3-211ENST00000542238 TEX22C9J3V5 150 aa11.54□□□□□ -0.56
RTN3-211ENST00000542238 RAB27BO00194 218 aa11.54□□□□□ -0.56
RTN3-211ENST00000542238 PDCD5O14737 125 aa11.54□□□□□ -0.56
RTN3-211ENST00000542238 KBTBD11O94819 623 aa11.54□□□□□ -0.56
RTN3-211ENST00000542238 HIST1H1BP16401 226 aaKnown RBP11.54□□□□□ -0.56
RTN3-211ENST00000542238 MAS1LP35410 378 aa11.54□□□□□ -0.56
RTN3-211ENST00000542238 FABP5Q01469 135 aa11.54□□□□□ -0.56
RTN3-211ENST00000542238 MLLT11Q13015 90 aaPredicted RBP11.54□□□□□ -0.56
RTN3-211ENST00000542238 SSX1Q16384 188 aa11.54□□□□□ -0.56
RTN3-211ENST00000542238 UBE2UQ5VVX9 321 aa11.54□□□□□ -0.56
RTN3-211ENST00000542238 RBPMS2Q6ZRY4 209 aaKnown RBP11.54□□□□□ -0.56
RTN3-211ENST00000542238 VKORC1L1Q8N0U8 176 aa11.54□□□□□ -0.56
RTN3-211ENST00000542238 SPARTQ8N0X7 666 aa11.54□□□□□ -0.56
RTN3-211ENST00000542238 OR4S2Q8NH73 311 aa11.54□□□□□ -0.56
RTN3-211ENST00000542238 CCDC140Q96MF4 163 aa11.54□□□□□ -0.56
RTN3-211ENST00000542238 RBMX2Q9Y388 322 aaKnown RBP11.54□□□□□ -0.56
RTN3-211ENST00000542238 OR2W1Q9Y3N9 320 aa11.54□□□□□ -0.56
RTN3-211ENST00000542238 TRAV25A0A0B4J276 109 aa11.53□□□□□ -0.56
RTN3-211ENST00000542238 IL6RP08887 468 aaPredicted RBP11.53□□□□□ -0.56
RTN3-211ENST00000542238 CTXN2P0C2S0 81 aa11.53□□□□□ -0.56
RTN3-211ENST00000542238 DEFA4P12838 97 aa11.53□□□□□ -0.56
RTN3-211ENST00000542238 RAB6AP20340 208 aa11.53□□□□□ -0.56
RTN3-211ENST00000542238 ARL6IP1Q15041 203 aa11.53□□□□□ -0.56
RTN3-211ENST00000542238 TM4SF20Q53R12 229 aa11.53□□□□□ -0.56
RTN3-211ENST00000542238 C19orf35Q6ZS72 473 aa11.53□□□□□ -0.56
RTN3-211ENST00000542238 ZNF367Q7RTV3 350 aa11.53□□□□□ -0.56
RTN3-211ENST00000542238 TMEM167AQ8TBQ9 72 aa11.53□□□□□ -0.56
RTN3-211ENST00000542238 MARC2Q969Z3 335 aa11.53□□□□□ -0.56
RTN3-211ENST00000542238 KLK5Q9Y337 293 aaPredicted RBP11.53□□□□□ -0.56
RTN3-211ENST00000542238 S4R3C0 116 aa11.53□□□□□ -0.56
RTN3-211ENST00000542238 IGKV1D-8A0A087WSZ0 117 aa11.52□□□□□ -0.57
RTN3-211ENST00000542238 TRBV7-1A0A0A6YYK4 115 aa11.52□□□□□ -0.57
RTN3-211ENST00000542238 A0A0J9YWU9 116 aa11.52□□□□□ -0.57
RTN3-211ENST00000542238 NOL3O60936 208 aaKnown RBP11.52□□□□□ -0.57
RTN3-211ENST00000542238 HLA-DQB1P01920 261 aa11.52□□□□□ -0.57
RTN3-211ENST00000542238 CRYGCP07315 174 aa11.52□□□□□ -0.57
RTN3-211ENST00000542238 ZNF735P0CB33 412 aa11.52□□□□□ -0.57
RTN3-211ENST00000542238 DTYMKP23919 212 aa11.52□□□□□ -0.57
RTN3-211ENST00000542238 PSMB6P28072 239 aa11.52□□□□□ -0.57
RTN3-211ENST00000542238 BMI1P35226 326 aa11.52□□□□□ -0.57
RTN3-211ENST00000542238 APOC4P55056 127 aa11.52□□□□□ -0.57
RTN3-211ENST00000542238 TNFRSF9Q07011 255 aa11.52□□□□□ -0.57
RTN3-211ENST00000542238 CEMP1Q6PRD7 247 aaPredicted RBP11.52□□□□□ -0.57
RTN3-211ENST00000542238 BTNL8Q6UX41 500 aa11.52□□□□□ -0.57
RTN3-211ENST00000542238 Q6ZNX1 250 aa11.52□□□□□ -0.57
RTN3-211ENST00000542238 WFDC3Q8IUB2 231 aa11.52□□□□□ -0.57
RTN3-211ENST00000542238 SLC38A6Q8IZM9 456 aa11.52□□□□□ -0.57
RTN3-211ENST00000542238 OR1L6Q8NGR2 347 aa11.52□□□□□ -0.57
RTN3-211ENST00000542238 TCTEX1D2Q8WW35 142 aa11.52□□□□□ -0.57
RTN3-211ENST00000542238 BORCS5Q969J3 196 aa11.52□□□□□ -0.57
RTN3-211ENST00000542238 CXorf58Q96LI9 332 aa11.52□□□□□ -0.57
RTN3-211ENST00000542238 FANCD2OSQ96PS1 177 aa11.52□□□□□ -0.57
RTN3-211ENST00000542238 HSD17B10Q99714 261 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms