RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 TRIP11Q15643 1979 aa2.27□□□□□ -2.05
LEMD3-204ENST00000542032 CHD5Q8TDI0 1954 aa2.27□□□□□ -2.05
LEMD3-204ENST00000542032 ARAP1Q96P48 1450 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 ATRNO75882 1429 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 NOS1P29475 1434 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 ABCC12Q96J65 1359 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 PIKFYVEQ9Y2I7 2098 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 IGLV1-50A0A075B6I6 118 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 TRBV19A0A075B6N1 114 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 TRAV36DV7A0A075B6V5 113 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 IGHV3-72A0A0B4J1Y9 119 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 TRAV4A0A0B4J268 109 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 A0A1B0GX51 115 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 A8MUN3 132 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 COX7A2LO14548 114 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 ZNF861PO60384 105 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 POP7O75817 140 aaKnown RBP2.26□□□□□ -2.05
LEMD3-204ENST00000542032 SCO1O75880 301 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 FAM107AO95990 144 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 IGLV3-27P01718 113 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 ADRA2AP08913 450 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 TLX1NBP0CAT3 122 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 UBBP0CG47 229 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 SMIM10L2AP0DMW4 78 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 SMIM10L2BP0DMW5 78 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 ZNF32P17041 273 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 RPS4Y1P22090 263 aaKnown RBP2.26□□□□□ -2.05
LEMD3-204ENST00000542032 CNTFRP26992 372 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 CMPK1P30085 196 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 PPP1CCP36873 323 aaKnown RBP2.26□□□□□ -2.05
LEMD3-204ENST00000542032 GNB2P62879 340 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 HOXC5Q00444 222 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 PDGFRLQ15198 375 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 GLT8D1Q68CQ7 371 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 ORMDL3Q8N138 153 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 NUP35Q8NFH5 326 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 OR13C4Q8NGS5 318 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 SGMS2Q8NHU3 365 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 ZNF721Q8TF20 911 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 RAB2BQ8WUD1 216 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 SLC7A6Q92536 515 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 ADAT3Q96EY9 351 aaPredicted RBP2.26□□□□□ -2.05
LEMD3-204ENST00000542032 PDXPQ96GD0 296 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 OR2A5Q96R48 311 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 TRIB3Q96RU7 358 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 HDHD3Q9BSH5 251 aaPredicted RBP2.26□□□□□ -2.05
LEMD3-204ENST00000542032 C11orf68Q9H3H3 251 aaKnown RBP2.26□□□□□ -2.05
LEMD3-204ENST00000542032 CACYBPQ9HB71 228 aaKnown RBP2.26□□□□□ -2.05
LEMD3-204ENST00000542032 POPDC3Q9HBV1 291 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 FBXL12Q9NXK8 326 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 TVP23BQ9NYZ1 205 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 TAAR3PQ9P1P4 343 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 ZNF492Q9P255 531 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 AK3Q9UIJ7 227 aa2.26□□□□□ -2.05
LEMD3-204ENST00000542032 RPUSD1Q9UJJ7 312 aaKnown RBP2.26□□□□□ -2.05
LEMD3-204ENST00000542032 RBM7Q9Y580 266 aaKnown RBP2.26□□□□□ -2.05
LEMD3-204ENST00000542032 YLPM1P49750 1951 aaKnown RBP2.25□□□□□ -2.05
LEMD3-204ENST00000542032 ZNFX1Q9P2E3 1918 aaKnown RBP2.25□□□□□ -2.05
LEMD3-204ENST00000542032 TRBV20OR9-2A0A075B6H5 130 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 TRAV9-1A0A075B6T8 112 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 IGHV5-51A0A0C4DH38 117 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 IGKV1-6A0A0C4DH72 117 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 A0A0J9YY10 115 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 A0A1B0GX78 115 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 DUXBA0A1W2PPF3 345 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 LST1O00453 97 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 SOCS1O15524 211 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 IGKV1-39P01597 117 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 IGKV1D-39P04432 117 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 ZNF688P0C7X2 276 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 ZNF705DP0CH99 300 aaPredicted RBP2.25□□□□□ -2.05
LEMD3-204ENST00000542032 INAFM2P0DMQ5 153 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 CD200P41217 278 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 POLR2HP52434 150 aaKnown RBP2.25□□□□□ -2.05
LEMD3-204ENST00000542032 HBA1P69905 142 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 LOXL1Q08397 574 aaPredicted RBP2.25□□□□□ -2.05
LEMD3-204ENST00000542032 MMDQ15546 238 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 IL17AQ16552 155 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 TNFAIP8L3Q5GJ75 292 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 FAM78AQ5JUQ0 283 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 WDR59Q6PJI9 974 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 PP632Q6XCG6 107 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 Q6ZS49 121 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 ZNF283Q8N7M2 679 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 TMEM229BQ8NBD8 167 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 TSTD1Q8NFU3 115 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 OR4K15Q8NH41 348 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 OR4A5Q8NH83 315 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 LMX1AQ8TE12 382 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 RTN4IP1Q8WWV3 396 aaPredicted RBP2.25□□□□□ -2.05
LEMD3-204ENST00000542032 TMEM203Q969S6 136 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 IMMP1LQ96LU5 166 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 IP6K3Q96PC2 410 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 GGACTQ9BVM4 153 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 TSSK6Q9BXA6 273 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 WDR61Q9GZS3 305 aaKnown RBP2.25□□□□□ -2.05
LEMD3-204ENST00000542032 HMG20AQ9NP66 347 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 C8orf17Q9NRJ1 99 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 CALML5Q9NZT1 146 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 LAMTOR3Q9UHA4 124 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms