RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 RUNX1Q01196 453 aa7.53□□□□□ -1.2
YBX3-212ENST00000542002 DEFA5Q01523 94 aa7.53□□□□□ -1.2
YBX3-212ENST00000542002 FHL3Q13643 280 aa7.53□□□□□ -1.2
YBX3-212ENST00000542002 PHLDA2Q53GA4 152 aa7.53□□□□□ -1.2
YBX3-212ENST00000542002 FOXB2Q5VYV0 432 aa7.53□□□□□ -1.2
YBX3-212ENST00000542002 OR4A47Q6IF82 309 aa7.53□□□□□ -1.2
YBX3-212ENST00000542002 C19orf35Q6ZS72 473 aa7.53□□□□□ -1.2
YBX3-212ENST00000542002 LHFPL1Q86WI0 220 aa7.53□□□□□ -1.2
YBX3-212ENST00000542002 TCTEX1D1Q8N7M0 179 aa7.53□□□□□ -1.2
YBX3-212ENST00000542002 TMEM229BQ8NBD8 167 aa7.53□□□□□ -1.2
YBX3-212ENST00000542002 OR11H1Q8NG94 326 aa7.53□□□□□ -1.2
YBX3-212ENST00000542002 OR5M8Q8NGP6 311 aa7.53□□□□□ -1.2
YBX3-212ENST00000542002 MCFD2Q8NI22 146 aa7.53□□□□□ -1.2
YBX3-212ENST00000542002 TMEM167AQ8TBQ9 72 aa7.53□□□□□ -1.2
YBX3-212ENST00000542002 SRSF12Q8WXF0 261 aaKnown RBP7.53□□□□□ -1.2
YBX3-212ENST00000542002 OR2A7Q96R45 310 aa7.53□□□□□ -1.2
YBX3-212ENST00000542002 HMX3A6NHT5 357 aa7.52□□□□□ -1.21
YBX3-212ENST00000542002 GPR31O00270 319 aa7.52□□□□□ -1.21
YBX3-212ENST00000542002 CTDSPLO15194 276 aa7.52□□□□□ -1.21
YBX3-212ENST00000542002 RBFOX2O43251 390 aaKnown RBP eCLIP7.52□□□□□ -1.21
YBX3-212ENST00000542002 S1PR2O95136 353 aa7.52□□□□□ -1.21
YBX3-212ENST00000542002 HPRT1P00492 218 aa7.52□□□□□ -1.21
YBX3-212ENST00000542002 PI3P19957 117 aa7.52□□□□□ -1.21
YBX3-212ENST00000542002 KIR2DS2P43631 304 aa7.52□□□□□ -1.21
YBX3-212ENST00000542002 LPAR6P43657 344 aa7.52□□□□□ -1.21
YBX3-212ENST00000542002 UCP3P55916 312 aa7.52□□□□□ -1.21
YBX3-212ENST00000542002 PRR20EP86478 221 aa7.52□□□□□ -1.21
YBX3-212ENST00000542002 PRR20CP86479 221 aa7.52□□□□□ -1.21
YBX3-212ENST00000542002 PRR20DP86480 221 aa7.52□□□□□ -1.21
YBX3-212ENST00000542002 PRR20BP86481 221 aa7.52□□□□□ -1.21
YBX3-212ENST00000542002 PRR20AP86496 221 aa7.52□□□□□ -1.21
YBX3-212ENST00000542002 ZNF45Q02386 682 aa7.52□□□□□ -1.21
YBX3-212ENST00000542002 PYHIN1Q6K0P9 492 aa7.52□□□□□ -1.21
YBX3-212ENST00000542002 FAAP20Q6NZ36 180 aa7.52□□□□□ -1.21
YBX3-212ENST00000542002 MMD2Q8IY49 270 aa7.52□□□□□ -1.21
YBX3-212ENST00000542002 POC5Q8NA72 575 aa7.52□□□□□ -1.21
YBX3-212ENST00000542002 ADAD2Q8NCV1 583 aaKnown RBP7.52□□□□□ -1.21
YBX3-212ENST00000542002 OR1N2Q8NGR9 330 aa7.52□□□□□ -1.21
YBX3-212ENST00000542002 SMIM4Q8WVI0 70 aa7.52□□□□□ -1.21
YBX3-212ENST00000542002 DGCR14Q96DF8 476 aaKnown RBP7.52□□□□□ -1.21
YBX3-212ENST00000542002 RSL24D1Q9UHA3 163 aaKnown RBP7.52□□□□□ -1.21
YBX3-212ENST00000542002 FABP12A6NFH5 140 aa7.51□□□□□ -1.21
YBX3-212ENST00000542002 CCDC160A6NGH7 325 aa7.51□□□□□ -1.21
YBX3-212ENST00000542002 UPK2O00526 184 aa7.51□□□□□ -1.21
YBX3-212ENST00000542002 NOL3O60936 208 aaKnown RBP7.51□□□□□ -1.21
YBX3-212ENST00000542002 BRI3O95415 125 aa7.51□□□□□ -1.21
YBX3-212ENST00000542002 HRASP01112 189 aa7.51□□□□□ -1.21
YBX3-212ENST00000542002 IGKV1-39P01597 117 aa7.51□□□□□ -1.21
YBX3-212ENST00000542002 TRGV3P03979 118 aa7.51□□□□□ -1.21
YBX3-212ENST00000542002 IGKV1D-39P04432 117 aa7.51□□□□□ -1.21
YBX3-212ENST00000542002 F2RP25116 425 aa7.51□□□□□ -1.21
YBX3-212ENST00000542002 HOXD3P31249 432 aaPredicted RBP7.51□□□□□ -1.21
YBX3-212ENST00000542002 RAB25P57735 213 aa7.51□□□□□ -1.21
YBX3-212ENST00000542002 TPPP2P59282 170 aa7.51□□□□□ -1.21
YBX3-212ENST00000542002 TAS2R31P59538 309 aa7.51□□□□□ -1.21
YBX3-212ENST00000542002 IL18Q14116 193 aa7.51□□□□□ -1.21
YBX3-212ENST00000542002 POU2AF1Q16633 256 aa7.51□□□□□ -1.21
YBX3-212ENST00000542002 PDLIM3Q53GG5 364 aaPredicted RBP7.51□□□□□ -1.21
YBX3-212ENST00000542002 RNASE10Q5GAN6 216 aaKnown RBP7.51□□□□□ -1.21
YBX3-212ENST00000542002 STEAP1BQ6NZ63 245 aa7.51□□□□□ -1.21
YBX3-212ENST00000542002 TBC1D26Q86UD7 250 aa7.51□□□□□ -1.21
YBX3-212ENST00000542002 TTC9CQ8N5M4 171 aa7.51□□□□□ -1.21
YBX3-212ENST00000542002 C15orf40Q8WUR7 153 aa7.51□□□□□ -1.21
YBX3-212ENST00000542002 RCC1LQ96I51 464 aaKnown RBP7.51□□□□□ -1.21
YBX3-212ENST00000542002 TMEM68Q96MH6 324 aa7.51□□□□□ -1.21
YBX3-212ENST00000542002 PLEKHA2Q9HB19 425 aa7.51□□□□□ -1.21
YBX3-212ENST00000542002 ZNF355PQ9NSJ1 428 aa7.51□□□□□ -1.21
YBX3-212ENST00000542002 BET1LQ9NYM9 111 aa7.51□□□□□ -1.21
YBX3-212ENST00000542002 IGHV4OR15-8A0A075B7B6 117 aa7.5□□□□□ -1.21
YBX3-212ENST00000542002 A0A087WW49 117 aa7.5□□□□□ -1.21
YBX3-212ENST00000542002 TRBV9A0A0B4J1U6 114 aa7.5□□□□□ -1.21
YBX3-212ENST00000542002 DBX1A6NMT0 343 aa7.5□□□□□ -1.21
YBX3-212ENST00000542002 ZNF701M0R085 212 aaPredicted RBP7.5□□□□□ -1.21
YBX3-212ENST00000542002 MPPED1O15442 326 aa7.5□□□□□ -1.21
YBX3-212ENST00000542002 GSTZ1O43708 216 aaPredicted RBP7.5□□□□□ -1.21
YBX3-212ENST00000542002 RAB3DO95716 219 aa7.5□□□□□ -1.21
YBX3-212ENST00000542002 KRASP01116 189 aa7.5□□□□□ -1.21
YBX3-212ENST00000542002 IFNA6P05013 189 aa7.5□□□□□ -1.21
YBX3-212ENST00000542002 LGALS1P09382 135 aaKnown RBP7.5□□□□□ -1.21
YBX3-212ENST00000542002 AREGP15514 252 aa7.5□□□□□ -1.21
YBX3-212ENST00000542002 NQO2P16083 231 aa7.5□□□□□ -1.21
YBX3-212ENST00000542002 HLA-GP17693 338 aa7.5□□□□□ -1.21
YBX3-212ENST00000542002 G6PCP35575 357 aa7.5□□□□□ -1.21
YBX3-212ENST00000542002 SLURP1P55000 103 aa7.5□□□□□ -1.21
YBX3-212ENST00000542002 TAS2R19P59542 299 aa7.5□□□□□ -1.21
YBX3-212ENST00000542002 OR2B8PP59922 312 aa7.5□□□□□ -1.21
YBX3-212ENST00000542002 RPL8P62917 257 aaKnown RBP7.5□□□□□ -1.21
YBX3-212ENST00000542002 CATR1Q13166 79 aa7.5□□□□□ -1.21
YBX3-212ENST00000542002 LPCAT3Q6P1A2 487 aa7.5□□□□□ -1.21
YBX3-212ENST00000542002 CMTM1Q8IZ96 169 aa7.5□□□□□ -1.21
YBX3-212ENST00000542002 SLC38A6Q8IZM9 456 aa7.5□□□□□ -1.21
YBX3-212ENST00000542002 TERB2Q8NHR7 220 aa7.5□□□□□ -1.21
YBX3-212ENST00000542002 CD300LFQ8TDQ1 290 aa7.5□□□□□ -1.21
YBX3-212ENST00000542002 DCUN1D4Q92564 292 aa7.5□□□□□ -1.21
YBX3-212ENST00000542002 DLX4Q92988 240 aaPredicted RBP7.5□□□□□ -1.21
YBX3-212ENST00000542002 FYTTD1Q96QD9 318 aaKnown RBP7.5□□□□□ -1.21
YBX3-212ENST00000542002 PHB2Q99623 299 aa7.5□□□□□ -1.21
YBX3-212ENST00000542002 SLA2Q9H6Q3 261 aa7.5□□□□□ -1.21
YBX3-212ENST00000542002 HRASLSQ9HDD0 168 aa7.5□□□□□ -1.21
YBX3-212ENST00000542002 SLC2A9Q9NRM0 540 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms