RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 SPEGQ15772 3267 aa13.53□□□□□ -0.24
VARS2-212ENST00000542001 CHD8Q9HCK8 2581 aa13.53□□□□□ -0.24
VARS2-212ENST00000542001 COLCA2A8K830 154 aa13.53□□□□□ -0.24
VARS2-212ENST00000542001 SLC25A17O43808 307 aa13.53□□□□□ -0.24
VARS2-212ENST00000542001 ACAA1P09110 424 aaPredicted RBP13.53□□□□□ -0.24
VARS2-212ENST00000542001 ICAM4Q14773 271 aa13.53□□□□□ -0.24
VARS2-212ENST00000542001 DPPA3Q6W0C5 159 aa13.53□□□□□ -0.24
VARS2-212ENST00000542001 PLSCR2Q9NRY7 297 aa13.53□□□□□ -0.24
VARS2-212ENST00000542001 RAB29O14966 203 aa13.53□□□□□ -0.24
VARS2-212ENST00000542001 ZNF253O75346 499 aa13.53□□□□□ -0.24
VARS2-212ENST00000542001 ARL3P36405 182 aa13.53□□□□□ -0.24
VARS2-212ENST00000542001 TCTAP57738 103 aa13.53□□□□□ -0.24
VARS2-212ENST00000542001 ACSF3Q4G176 576 aaPredicted RBP13.53□□□□□ -0.24
VARS2-212ENST00000542001 SLC45A2Q9UMX9 530 aa13.53□□□□□ -0.24
VARS2-212ENST00000542001 S4R3C0 116 aa13.53□□□□□ -0.24
VARS2-212ENST00000542001 HELTA6NFD8 242 aa13.53□□□□□ -0.24
VARS2-212ENST00000542001 SLC17A3O00476 420 aa13.53□□□□□ -0.24
VARS2-212ENST00000542001 ZNF137PP52743 207 aa13.53□□□□□ -0.24
VARS2-212ENST00000542001 RNASEKQ6P5S7 137 aaKnown RBP13.53□□□□□ -0.24
VARS2-212ENST00000542001 NPVFQ9HCQ7 196 aa13.53□□□□□ -0.24
VARS2-212ENST00000542001 PARD6AQ9NPB6 346 aa13.53□□□□□ -0.24
VARS2-212ENST00000542001 LOC102723971A0A1B0GUV8 181 aa13.52□□□□□ -0.24
VARS2-212ENST00000542001 CHEK1O14757 476 aa13.52□□□□□ -0.24
VARS2-212ENST00000542001 OR4A8P0C604 315 aa13.52□□□□□ -0.24
VARS2-212ENST00000542001 ZNF324BQ6AW86 544 aaPredicted RBP13.52□□□□□ -0.24
VARS2-212ENST00000542001 ELOVL1Q9BW60 279 aa13.52□□□□□ -0.24
VARS2-212ENST00000542001 GAL3ST2Q9H3Q3 398 aa13.52□□□□□ -0.24
VARS2-212ENST00000542001 ZNF586Q9NXT0 402 aa13.52□□□□□ -0.24
VARS2-212ENST00000542001 HILPDAQ9Y5L2 63 aa13.52□□□□□ -0.24
VARS2-212ENST00000542001 MED12LQ86YW9 2145 aa13.52□□□□□ -0.25
VARS2-212ENST00000542001 IGKV1-5P01602 117 aa13.52□□□□□ -0.25
VARS2-212ENST00000542001 MYOD1P15172 320 aa13.52□□□□□ -0.25
VARS2-212ENST00000542001 P2RY6Q15077 328 aa13.52□□□□□ -0.25
VARS2-212ENST00000542001 DNM1P46Q6ZS02 220 aa13.52□□□□□ -0.25
VARS2-212ENST00000542001 CLDND2Q8NHS1 167 aa13.52□□□□□ -0.25
VARS2-212ENST00000542001 SSBP3Q9BWW4 388 aaPredicted RBP13.52□□□□□ -0.25
VARS2-212ENST00000542001 MANBALQ9NQG1 85 aa13.52□□□□□ -0.25
VARS2-212ENST00000542001 NUP210Q8TEM1 1887 aaPredicted RBP13.52□□□□□ -0.25
VARS2-212ENST00000542001 ZNF106Q9H2Y7 1883 aaKnown RBP13.52□□□□□ -0.25
VARS2-212ENST00000542001 TMSB15BA0A087X1C1 80 aa13.52□□□□□ -0.25
VARS2-212ENST00000542001 IGHV2OR16-5A0A0B4J2B6 119 aa13.52□□□□□ -0.25
VARS2-212ENST00000542001 PLXNB1O43157 2135 aa13.52□□□□□ -0.25
VARS2-212ENST00000542001 CD5P06127 495 aa13.52□□□□□ -0.25
VARS2-212ENST00000542001 CRYBB3P26998 211 aa13.52□□□□□ -0.25
VARS2-212ENST00000542001 MYO18BQ8IUG5 2567 aa13.51□□□□□ -0.25
VARS2-212ENST00000542001 VCANP13611 3396 aa13.51□□□□□ -0.25
VARS2-212ENST00000542001 CCL3L1P16619 93 aa13.51□□□□□ -0.25
VARS2-212ENST00000542001 HOXA6P31267 233 aa13.51□□□□□ -0.25
VARS2-212ENST00000542001 PAX5Q02548 391 aa13.51□□□□□ -0.25
VARS2-212ENST00000542001 ZBTB34Q8NCN2 500 aa13.51□□□□□ -0.25
VARS2-212ENST00000542001 IMMP2LQ96T52 175 aa13.51□□□□□ -0.25
VARS2-212ENST00000542001 SIRT7Q9NRC8 400 aa13.51□□□□□ -0.25
VARS2-212ENST00000542001 HSBP1L1C9JCN9 74 aa13.51□□□□□ -0.25
VARS2-212ENST00000542001 CXCL1P09341 107 aa13.51□□□□□ -0.25
VARS2-212ENST00000542001 GNB2P62879 340 aa13.51□□□□□ -0.25
VARS2-212ENST00000542001 ARL16Q0P5N6 197 aa13.51□□□□□ -0.25
VARS2-212ENST00000542001 OR8I2Q8N0Y5 310 aa13.51□□□□□ -0.25
VARS2-212ENST00000542001 GGACTQ9BVM4 153 aa13.51□□□□□ -0.25
VARS2-212ENST00000542001 SPTBN4Q9H254 2564 aa13.51□□□□□ -0.25
VARS2-212ENST00000542001 DENND4AQ7Z401 1863 aa13.51□□□□□ -0.25
VARS2-212ENST00000542001 NAPSAO96009 420 aa13.51□□□□□ -0.25
VARS2-212ENST00000542001 BPIFB3P59826 476 aa13.51□□□□□ -0.25
VARS2-212ENST00000542001 SSX7Q7RTT5 188 aa13.51□□□□□ -0.25
VARS2-212ENST00000542001 SETD2Q9BYW2 2564 aaPredicted RBP13.51□□□□□ -0.25
VARS2-212ENST00000542001 KIAA1549LQ6ZVL6 1849 aa13.5□□□□□ -0.25
VARS2-212ENST00000542001 SPCS3P61009 180 aa13.5□□□□□ -0.25
VARS2-212ENST00000542001 RNF151Q2KHN1 245 aa13.5□□□□□ -0.25
VARS2-212ENST00000542001 WDR82Q6UXN9 313 aa13.5□□□□□ -0.25
VARS2-212ENST00000542001 DOLPP1Q86YN1 238 aa13.5□□□□□ -0.25
VARS2-212ENST00000542001 VN1R17PQ8TDU5 208 aa13.5□□□□□ -0.25
VARS2-212ENST00000542001 NPCDR1Q9BY65 106 aa13.5□□□□□ -0.25
VARS2-212ENST00000542001 BARX1Q9HBU1 254 aaPredicted RBP13.5□□□□□ -0.25
VARS2-212ENST00000542001 TECRQ9NZ01 308 aaKnown RBP13.5□□□□□ -0.25
VARS2-212ENST00000542001 INSIG2Q9Y5U4 225 aa13.5□□□□□ -0.25
VARS2-212ENST00000542001 ARL2-SNX15V9GYD0 113 aa13.5□□□□□ -0.25
VARS2-212ENST00000542001 LSM10Q969L4 123 aaKnown RBP13.5□□□□□ -0.25
VARS2-212ENST00000542001 AP1S3Q96PC3 154 aa13.5□□□□□ -0.25
VARS2-212ENST00000542001 AHRRA9YTQ3 701 aa13.5□□□□□ -0.25
VARS2-212ENST00000542001 LYNX1G3V0Z9 82 aa13.5□□□□□ -0.25
VARS2-212ENST00000542001 LYNX1P0DP58 116 aa13.5□□□□□ -0.25
VARS2-212ENST00000542001 ZNF506Q5JVG8 444 aa13.5□□□□□ -0.25
VARS2-212ENST00000542001 TMEM42Q69YG0 159 aa13.5□□□□□ -0.25
VARS2-212ENST00000542001 PQLC2Q6ZP29 291 aa13.5□□□□□ -0.25
VARS2-212ENST00000542001 OR2D3Q8NGH3 330 aa13.5□□□□□ -0.25
VARS2-212ENST00000542001 OR1L6Q8NGR2 347 aa13.5□□□□□ -0.25
VARS2-212ENST00000542001 ANKRD11Q6UB99 2663 aaPredicted RBP13.49□□□□□ -0.25
VARS2-212ENST00000542001 IGKV3-7A0A075B6H7 116 aa13.49□□□□□ -0.25
VARS2-212ENST00000542001 PPIAL4EA0A075B759 164 aa13.49□□□□□ -0.25
VARS2-212ENST00000542001 PPIAL4DF5H284 164 aa13.49□□□□□ -0.25
VARS2-212ENST00000542001 TCAPO15273 167 aa13.49□□□□□ -0.25
VARS2-212ENST00000542001 PPIAL4FP0DN26 164 aa13.49□□□□□ -0.25
VARS2-212ENST00000542001 CBLN1P23435 193 aa13.49□□□□□ -0.25
VARS2-212ENST00000542001 LRRC75BQ2VPJ9 315 aa13.49□□□□□ -0.25
VARS2-212ENST00000542001 KDF1Q8NAX2 398 aaPredicted RBP13.49□□□□□ -0.25
VARS2-212ENST00000542001 TIMD4Q96H15 378 aa13.49□□□□□ -0.25
VARS2-212ENST00000542001 OR51M1Q9H341 326 aa13.49□□□□□ -0.25
VARS2-212ENST00000542001 PPIAL4AQ9Y536 164 aa13.49□□□□□ -0.25
VARS2-212ENST00000542001 B4DEV8 164 aa13.49□□□□□ -0.25
VARS2-212ENST00000542001 EAF1Q96JC9 268 aaPredicted RBP13.49□□□□□ -0.25
VARS2-212ENST00000542001 ZNRD1Q9P1U0 126 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms