RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 WRBO00258 174 aa22.4■■□□□ 1.18
CCM2-218ENST00000541586 GAPDHP04406 335 aaKnown RBP22.4■■□□□ 1.18
CCM2-218ENST00000541586 HKR1P10072 659 aa22.4■■□□□ 1.18
CCM2-218ENST00000541586 LDLRAD2Q5SZI1 272 aa22.4■■□□□ 1.18
CCM2-218ENST00000541586 BRD3OSQ6XYD6 125 aa22.4■■□□□ 1.18
CCM2-218ENST00000541586 RPEQ96AT9 228 aa22.4■■□□□ 1.18
CCM2-218ENST00000541586 TMEM160Q9NX00 188 aa22.4■■□□□ 1.18
CCM2-218ENST00000541586 FAM90A9PA6NNJ1 464 aa22.39■■□□□ 1.17
CCM2-218ENST00000541586 CHST1O43916 411 aa22.39■■□□□ 1.17
CCM2-218ENST00000541586 HRASP01112 189 aa22.39■■□□□ 1.17
CCM2-218ENST00000541586 HTR1DP28221 377 aa22.39■■□□□ 1.17
CCM2-218ENST00000541586 PDPNQ86YL7 162 aa22.39■■□□□ 1.17
CCM2-218ENST00000541586 PVALBP20472 110 aaPredicted RBP22.38■■□□□ 1.17
CCM2-218ENST00000541586 RPL12P30050 165 aaKnown RBP22.38■■□□□ 1.17
CCM2-218ENST00000541586 P2RY1P47900 373 aa22.38■■□□□ 1.17
CCM2-218ENST00000541586 POU2AF1Q16633 256 aa22.38■■□□□ 1.17
CCM2-218ENST00000541586 RUSC1-AS1Q66K80 236 aa22.38■■□□□ 1.17
CCM2-218ENST00000541586 C22orf15Q8WYQ4 148 aa22.38■■□□□ 1.17
CCM2-218ENST00000541586 WASHC3Q9Y3C0 194 aa22.38■■□□□ 1.17
CCM2-218ENST00000541586 IGHV1-3A0A0C4DH29 117 aa22.37■■□□□ 1.17
CCM2-218ENST00000541586 SRRM4A7MD48 611 aaKnown RBP22.37■■□□□ 1.17
CCM2-218ENST00000541586 FAM90A26D6RGX4 464 aa22.37■■□□□ 1.17
CCM2-218ENST00000541586 ARHGDIBP52566 201 aa22.37■■□□□ 1.17
CCM2-218ENST00000541586 TMEM177Q53S58 311 aa22.37■■□□□ 1.17
CCM2-218ENST00000541586 OR4A47Q6IF82 309 aa22.37■■□□□ 1.17
CCM2-218ENST00000541586 OSR1Q8TAX0 266 aaPredicted RBP22.37■■□□□ 1.17
CCM2-218ENST00000541586 DPM3Q9P2X0 92 aa22.37■■□□□ 1.17
CCM2-218ENST00000541586 HSPB7Q9UBY9 170 aa22.37■■□□□ 1.17
CCM2-218ENST00000541586 LEUTXA8MZ59 168 aa22.37■■□□□ 1.17
CCM2-218ENST00000541586 TXNL1O43396 289 aa22.37■■□□□ 1.17
CCM2-218ENST00000541586 SYNGR2O43760 224 aa22.37■■□□□ 1.17
CCM2-218ENST00000541586 RBMXL2O75526 392 aaKnown RBP22.37■■□□□ 1.17
CCM2-218ENST00000541586 TMEM50AO95807 157 aa22.37■■□□□ 1.17
CCM2-218ENST00000541586 MC5RP33032 325 aa22.37■■□□□ 1.17
CCM2-218ENST00000541586 RAB13P51153 203 aa22.37■■□□□ 1.17
CCM2-218ENST00000541586 UBE2E1P51965 193 aa22.37■■□□□ 1.17
CCM2-218ENST00000541586 TNFRSF9Q07011 255 aa22.37■■□□□ 1.17
CCM2-218ENST00000541586 TPTE2P1Q5T6R2 138 aa22.37■■□□□ 1.17
CCM2-218ENST00000541586 FLYWCH2Q96CP2 140 aaKnown RBP22.37■■□□□ 1.17
CCM2-218ENST00000541586 NUP50Q9UKX7 468 aa22.37■■□□□ 1.17
CCM2-218ENST00000541586 IGHV1-69DA0A0B4J2H0 117 aa22.36■■□□□ 1.17
CCM2-218ENST00000541586 SHOXO15266 292 aa22.36■■□□□ 1.17
CCM2-218ENST00000541586 BCL2L11O43521 198 aa22.36■■□□□ 1.17
CCM2-218ENST00000541586 IGHV1-69P01742 117 aa22.36■■□□□ 1.17
CCM2-218ENST00000541586 VAMP2P63027 116 aa22.36■■□□□ 1.17
CCM2-218ENST00000541586 TEX29Q8N6K0 151 aa22.36■■□□□ 1.17
CCM2-218ENST00000541586 OR4C13Q8NGP0 309 aa22.36■■□□□ 1.17
CCM2-218ENST00000541586 CDC42EP3Q9UKI2 254 aa22.36■■□□□ 1.17
CCM2-218ENST00000541586 TEP1Q99973 2627 aaKnown RBP22.36■■□□□ 1.17
CCM2-218ENST00000541586 IGHV3-72A0A0B4J1Y9 119 aa22.35■■□□□ 1.17
CCM2-218ENST00000541586 TRAV3A0A0B4J244 114 aa22.35■■□□□ 1.17
CCM2-218ENST00000541586 KANTRA0A1W2PQU2 76 aa22.35■■□□□ 1.17
CCM2-218ENST00000541586 PAX9P55771 341 aa22.35■■□□□ 1.17
CCM2-218ENST00000541586 OR2B8PP59922 312 aa22.35■■□□□ 1.17
CCM2-218ENST00000541586 RELBQ01201 579 aa22.35■■□□□ 1.17
CCM2-218ENST00000541586 LHFPL4Q7Z7J7 247 aa22.35■■□□□ 1.17
CCM2-218ENST00000541586 OR4A16Q8NH70 328 aa22.35■■□□□ 1.17
CCM2-218ENST00000541586 HARBI1Q96MB7 349 aa22.35■■□□□ 1.17
CCM2-218ENST00000541586 MS4A7Q9GZW8 240 aaPredicted RBP22.35■■□□□ 1.17
CCM2-218ENST00000541586 ZC4H2Q9NQZ6 224 aa22.35■■□□□ 1.17
CCM2-218ENST00000541586 RGS13O14921 159 aa22.34■■□□□ 1.17
CCM2-218ENST00000541586 UBE2KP61086 200 aa22.34■■□□□ 1.17
CCM2-218ENST00000541586 AARDQ4LEZ3 155 aa22.34■■□□□ 1.17
CCM2-218ENST00000541586 MOB3BQ86TA1 216 aa22.34■■□□□ 1.17
CCM2-218ENST00000541586 OR2C3Q8N628 320 aa22.34■■□□□ 1.17
CCM2-218ENST00000541586 RAB40CQ96S21 281 aa22.34■■□□□ 1.17
CCM2-218ENST00000541586 AIFM2Q9BRQ8 373 aa22.34■■□□□ 1.17
CCM2-218ENST00000541586 QTRT1Q9BXR0 403 aaKnown RBP22.34■■□□□ 1.17
CCM2-218ENST00000541586 SOX21Q9Y651 276 aaPredicted RBP22.34■■□□□ 1.17
CCM2-218ENST00000541586 A0A1W2PPI3 338 aa22.34■■□□□ 1.17
CCM2-218ENST00000541586 CEACAM3P40198 252 aa22.34■■□□□ 1.17
CCM2-218ENST00000541586 LGALS4P56470 323 aa22.34■■□□□ 1.17
CCM2-218ENST00000541586 ARPC5LQ9BPX5 153 aa22.34■■□□□ 1.17
CCM2-218ENST00000541586 RBKSQ9H477 322 aa22.34■■□□□ 1.17
CCM2-218ENST00000541586 LYRM2Q9NU23 88 aaPredicted RBP22.34■■□□□ 1.17
CCM2-218ENST00000541586 GPR137BO60478 399 aa22.33■■□□□ 1.17
CCM2-218ENST00000541586 CAV2P51636 162 aa22.33■■□□□ 1.17
CCM2-218ENST00000541586 PIP4P2Q8N4L2 257 aa22.33■■□□□ 1.17
CCM2-218ENST00000541586 OR8H1Q8NGG4 311 aa22.33■■□□□ 1.17
CCM2-218ENST00000541586 HILPDAQ9Y5L2 63 aa22.33■■□□□ 1.17
CCM2-218ENST00000541586 FAM24AA6NFZ4 105 aa22.32■■□□□ 1.16
CCM2-218ENST00000541586 NPFFO15130 113 aa22.32■■□□□ 1.16
CCM2-218ENST00000541586 FSHBP01225 129 aa22.32■■□□□ 1.16
CCM2-218ENST00000541586 IL6RP08887 468 aaPredicted RBP22.32■■□□□ 1.16
CCM2-218ENST00000541586 IAPPP10997 89 aa22.32■■□□□ 1.16
CCM2-218ENST00000541586 RPS16P62249 146 aaKnown RBP22.32■■□□□ 1.16
CCM2-218ENST00000541586 TEX261Q6UWH6 196 aa22.32■■□□□ 1.16
CCM2-218ENST00000541586 BCL6BQ8N143 479 aaPredicted RBP22.32■■□□□ 1.16
CCM2-218ENST00000541586 U3KQ87 197 aa22.32■■□□□ 1.16
CCM2-218ENST00000541586 MTORP42345 2549 aa22.32■■□□□ 1.16
CCM2-218ENST00000541586 MED6O75586 246 aa22.31■■□□□ 1.16
CCM2-218ENST00000541586 SAA1P0DJI8 122 aaPredicted RBP22.31■■□□□ 1.16
CCM2-218ENST00000541586 SRD5A1P18405 259 aa22.31■■□□□ 1.16
CCM2-218ENST00000541586 SLC51BQ86UW2 128 aa22.31■■□□□ 1.16
CCM2-218ENST00000541586 WSB1Q9Y6I7 421 aa22.31■■□□□ 1.16
CCM2-218ENST00000541586 MINOS1Q5TGZ0 78 aa22.31■■□□□ 1.16
CCM2-218ENST00000541586 PUSL1Q8N0Z8 303 aaKnown RBP22.31■■□□□ 1.16
CCM2-218ENST00000541586 MINOS1-NBL1R4GNA1 71 aa22.31■■□□□ 1.16
CCM2-218ENST00000541586 IGSF23A1L1A6 192 aa22.3■■□□□ 1.16
CCM2-218ENST00000541586 C15orf61A6NNL5 157 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms