RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 LINC00205P59089 165 aa11.98□□□□□ -0.49
SFSWAP-210ENST00000541286 TGFBR3Q03167 851 aa11.98□□□□□ -0.49
SFSWAP-210ENST00000541286 BAXQ07812 192 aa11.98□□□□□ -0.49
SFSWAP-210ENST00000541286 KRTCAP3Q53RY4 240 aa11.98□□□□□ -0.49
SFSWAP-210ENST00000541286 OR5A2Q8NGI9 324 aa11.98□□□□□ -0.49
SFSWAP-210ENST00000541286 OR1L6Q8NGR2 347 aa11.98□□□□□ -0.49
SFSWAP-210ENST00000541286 RFESDQ8TAC1 157 aa11.98□□□□□ -0.49
SFSWAP-210ENST00000541286 OR51I2Q9H344 312 aa11.98□□□□□ -0.49
SFSWAP-210ENST00000541286 RNF115Q9Y4L5 304 aa11.98□□□□□ -0.49
SFSWAP-210ENST00000541286 IGKV3D-15A0A087WSY6 115 aa11.97□□□□□ -0.49
SFSWAP-210ENST00000541286 ZG16O60844 167 aa11.97□□□□□ -0.49
SFSWAP-210ENST00000541286 ATOH7Q8N100 152 aa11.97□□□□□ -0.49
SFSWAP-210ENST00000541286 GBGT1Q8N5D6 347 aa11.97□□□□□ -0.49
SFSWAP-210ENST00000541286 ZNF709Q8N972 641 aa11.97□□□□□ -0.49
SFSWAP-210ENST00000541286 ST6GALNAC3Q8NDV1 305 aa11.97□□□□□ -0.49
SFSWAP-210ENST00000541286 OR4C12Q96R67 309 aa11.97□□□□□ -0.49
SFSWAP-210ENST00000541286 PARLQ9H300 379 aa11.97□□□□□ -0.49
SFSWAP-210ENST00000541286 C11orf1Q9H5F2 150 aa11.97□□□□□ -0.49
SFSWAP-210ENST00000541286 IGHV3-43A0A0B4J1X8 118 aa11.97□□□□□ -0.49
SFSWAP-210ENST00000541286 CLEC18AA5D8T8 446 aa11.97□□□□□ -0.49
SFSWAP-210ENST00000541286 TMEM8BA6NDV4 472 aa11.97□□□□□ -0.49
SFSWAP-210ENST00000541286 KIAA1324LA8MWY0 1029 aaPredicted RBP11.97□□□□□ -0.49
SFSWAP-210ENST00000541286 DEFB108AA8MXU0 73 aa11.97□□□□□ -0.49
SFSWAP-210ENST00000541286 IGHV3-43DP0DP04 118 aa11.97□□□□□ -0.49
SFSWAP-210ENST00000541286 MDP1Q86V88 176 aa11.97□□□□□ -0.49
SFSWAP-210ENST00000541286 CLEC18CQ8NCF0 446 aa11.97□□□□□ -0.49
SFSWAP-210ENST00000541286 OR5P3Q8WZ94 311 aa11.97□□□□□ -0.49
SFSWAP-210ENST00000541286 POM121L2Q96KW2 1035 aa11.97□□□□□ -0.49
SFSWAP-210ENST00000541286 FAM234AQ9H0X4 552 aa11.97□□□□□ -0.49
SFSWAP-210ENST00000541286 AHRRA9YTQ3 701 aa11.96□□□□□ -0.49
SFSWAP-210ENST00000541286 IGKV1-39P01597 117 aa11.96□□□□□ -0.49
SFSWAP-210ENST00000541286 IGKV1D-39P04432 117 aa11.96□□□□□ -0.49
SFSWAP-210ENST00000541286 CEACAM8P31997 349 aaPredicted RBP11.96□□□□□ -0.49
SFSWAP-210ENST00000541286 G6PCP35575 357 aa11.96□□□□□ -0.49
SFSWAP-210ENST00000541286 RAB7AP51149 207 aa11.96□□□□□ -0.49
SFSWAP-210ENST00000541286 COLCA1Q6ZS62 124 aa11.96□□□□□ -0.49
SFSWAP-210ENST00000541286 ZNF826PQ6ZT77 177 aa11.96□□□□□ -0.49
SFSWAP-210ENST00000541286 GMPPAQ96IJ6 420 aaPredicted RBP11.96□□□□□ -0.49
SFSWAP-210ENST00000541286 HSPB9Q9BQS6 159 aa11.96□□□□□ -0.49
SFSWAP-210ENST00000541286 MANBALQ9NQG1 85 aa11.96□□□□□ -0.49
SFSWAP-210ENST00000541286 CISD1Q9NZ45 108 aaKnown RBP11.96□□□□□ -0.49
SFSWAP-210ENST00000541286 OR2H2O95918 312 aa11.96□□□□□ -0.49
SFSWAP-210ENST00000541286 FRMD6-AS1P0C7T7 363 aa11.96□□□□□ -0.49
SFSWAP-210ENST00000541286 THBS3P49746 956 aa11.96□□□□□ -0.49
SFSWAP-210ENST00000541286 PNRC1Q12796 327 aaPredicted RBP11.96□□□□□ -0.49
SFSWAP-210ENST00000541286 RNPS1Q15287 305 aaKnown RBP11.96□□□□□ -0.49
SFSWAP-210ENST00000541286 KRTAP27-1Q3LI81 207 aa11.96□□□□□ -0.49
SFSWAP-210ENST00000541286 DERL1Q9BUN8 251 aa11.96□□□□□ -0.49
SFSWAP-210ENST00000541286 CLN8Q9UBY8 286 aa11.96□□□□□ -0.49
SFSWAP-210ENST00000541286 FLNBO75369 2602 aaKnown RBP11.96□□□□□ -0.5
SFSWAP-210ENST00000541286 TMEM210A6NLX4 147 aa11.96□□□□□ -0.5
SFSWAP-210ENST00000541286 IGKV1D-33P01593 117 aa11.96□□□□□ -0.5
SFSWAP-210ENST00000541286 IGKV1-33P01594 117 aa11.96□□□□□ -0.5
SFSWAP-210ENST00000541286 IGKV1-5P01602 117 aa11.96□□□□□ -0.5
SFSWAP-210ENST00000541286 CHRNB4P30926 498 aa11.96□□□□□ -0.5
SFSWAP-210ENST00000541286 PTTG1IPP53801 180 aa11.96□□□□□ -0.5
SFSWAP-210ENST00000541286 KRTDAPP60985 99 aa11.96□□□□□ -0.5
SFSWAP-210ENST00000541286 DNLZQ5SXM8 178 aa11.96□□□□□ -0.5
SFSWAP-210ENST00000541286 FBXW9Q5XUX1 488 aa11.96□□□□□ -0.5
SFSWAP-210ENST00000541286 TMEM170AQ8WVE7 144 aa11.96□□□□□ -0.5
SFSWAP-210ENST00000541286 RAB40CQ96S21 281 aa11.96□□□□□ -0.5
SFSWAP-210ENST00000541286 OR10J1P30954 320 aa11.95□□□□□ -0.5
SFSWAP-210ENST00000541286 PRR31Q5SQ13 230 aa11.95□□□□□ -0.5
SFSWAP-210ENST00000541286 OBP2BQ9NPH6 170 aa11.95□□□□□ -0.5
SFSWAP-210ENST00000541286 NAT8Q9UHE5 227 aa11.95□□□□□ -0.5
SFSWAP-210ENST00000541286 RAMP3O60896 148 aa11.95□□□□□ -0.5
SFSWAP-210ENST00000541286 HBG1P69891 147 aa11.95□□□□□ -0.5
SFSWAP-210ENST00000541286 HBG2P69892 147 aa11.95□□□□□ -0.5
SFSWAP-210ENST00000541286 Q6ZWC4 215 aa11.95□□□□□ -0.5
SFSWAP-210ENST00000541286 MBD3L4A6NDZ8 208 aaPredicted RBP11.94□□□□□ -0.5
SFSWAP-210ENST00000541286 MBD3L3A6NE82 208 aaPredicted RBP11.94□□□□□ -0.5
SFSWAP-210ENST00000541286 CBY3A6NI87 242 aa11.94□□□□□ -0.5
SFSWAP-210ENST00000541286 MBD3L5A6NJ08 208 aaPredicted RBP11.94□□□□□ -0.5
SFSWAP-210ENST00000541286 WNT9BO14905 357 aa11.94□□□□□ -0.5
SFSWAP-210ENST00000541286 PAGE4O60829 102 aa11.94□□□□□ -0.5
SFSWAP-210ENST00000541286 SS18L1O75177 396 aaPredicted RBP11.94□□□□□ -0.5
SFSWAP-210ENST00000541286 ARR3P36575 388 aa11.94□□□□□ -0.5
SFSWAP-210ENST00000541286 SLC38A11Q08AI6 406 aa11.94□□□□□ -0.5
SFSWAP-210ENST00000541286 GUSBP1Q15486 140 aa11.94□□□□□ -0.5
SFSWAP-210ENST00000541286 H1FOOQ8IZA3 346 aaPredicted RBP11.94□□□□□ -0.5
SFSWAP-210ENST00000541286 MBD3L2Q8NHZ7 208 aaPredicted RBP11.94□□□□□ -0.5
SFSWAP-210ENST00000541286 OR2D2Q9H210 308 aa11.94□□□□□ -0.5
SFSWAP-210ENST00000541286 OR6C3Q9NZP0 311 aa11.94□□□□□ -0.5
SFSWAP-210ENST00000541286 CGAP01215 116 aa11.94□□□□□ -0.5
SFSWAP-210ENST00000541286 GYPAP02724 150 aa11.94□□□□□ -0.5
SFSWAP-210ENST00000541286 IL3RAP26951 378 aa11.94□□□□□ -0.5
SFSWAP-210ENST00000541286 MDH2P40926 338 aaKnown RBP11.94□□□□□ -0.5
SFSWAP-210ENST00000541286 ZNF295-AS1Q8N0V1 137 aa11.94□□□□□ -0.5
SFSWAP-210ENST00000541286 FGFRL1Q8N441 504 aa11.94□□□□□ -0.5
SFSWAP-210ENST00000541286 RPP25LQ8N5L8 163 aaKnown RBP11.94□□□□□ -0.5
SFSWAP-210ENST00000541286 OR1L1Q8NH94 360 aa11.94□□□□□ -0.5
SFSWAP-210ENST00000541286 BTF3L4Q96K17 158 aa11.94□□□□□ -0.5
SFSWAP-210ENST00000541286 CIB3Q96Q77 187 aaPredicted RBP11.94□□□□□ -0.5
SFSWAP-210ENST00000541286 CBLN1P23435 193 aa11.94□□□□□ -0.5
SFSWAP-210ENST00000541286 GABRA2P47869 451 aa11.94□□□□□ -0.5
SFSWAP-210ENST00000541286 ADORA2A-AS1P86434 159 aa11.94□□□□□ -0.5
SFSWAP-210ENST00000541286 MEF2BQ02080 365 aaPredicted RBP11.94□□□□□ -0.5
SFSWAP-210ENST00000541286 AESQ08117 197 aa11.94□□□□□ -0.5
SFSWAP-210ENST00000541286 ZNF843Q8N446 348 aa11.94□□□□□ -0.5
SFSWAP-210ENST00000541286 DRAM1Q8N682 238 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms