RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 PXMP4Q9Y6I8 212 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 CYC1P08574 325 aa8.6□□□□□ -1.03
CDC42SE1-207ENST00000540998 FXYD3Q14802 87 aa8.6□□□□□ -1.03
CDC42SE1-207ENST00000540998 TBC1D28Q2M2D7 210 aa8.6□□□□□ -1.03
CDC42SE1-207ENST00000540998 PRAMEF5Q5TYX0 476 aa8.6□□□□□ -1.03
CDC42SE1-207ENST00000540998 KCNIP4Q6PIL6 250 aa8.6□□□□□ -1.03
CDC42SE1-207ENST00000540998 TREML4Q6UXN2 200 aa8.6□□□□□ -1.03
CDC42SE1-207ENST00000540998 TMEM144Q7Z5S9 345 aa8.6□□□□□ -1.03
CDC42SE1-207ENST00000540998 KLF14Q8TD94 323 aaPredicted RBP8.6□□□□□ -1.03
CDC42SE1-207ENST00000540998 VN1R17PQ8TDU5 208 aa8.6□□□□□ -1.03
CDC42SE1-207ENST00000540998 HSPB9Q9BQS6 159 aa8.6□□□□□ -1.03
CDC42SE1-207ENST00000540998 IER2Q9BTL4 223 aa8.6□□□□□ -1.03
CDC42SE1-207ENST00000540998 HEYLQ9NQ87 328 aaPredicted RBP8.6□□□□□ -1.03
CDC42SE1-207ENST00000540998 ZNRD1Q9P1U0 126 aa8.6□□□□□ -1.03
CDC42SE1-207ENST00000540998 TTC28Q96AY4 2481 aa8.6□□□□□ -1.03
CDC42SE1-207ENST00000540998 IER3P46695 156 aa8.6□□□□□ -1.03
CDC42SE1-207ENST00000540998 RAB4BP61018 213 aa8.6□□□□□ -1.03
CDC42SE1-207ENST00000540998 ACOT6Q3I5F7 207 aaPredicted RBP8.6□□□□□ -1.03
CDC42SE1-207ENST00000540998 KRTCAP3Q53RY4 240 aa8.6□□□□□ -1.03
CDC42SE1-207ENST00000540998 ZNF766Q5HY98 468 aa8.6□□□□□ -1.03
CDC42SE1-207ENST00000540998 DCAF10Q5QP82 559 aa8.6□□□□□ -1.03
CDC42SE1-207ENST00000540998 FBXW9Q5XUX1 488 aa8.6□□□□□ -1.03
CDC42SE1-207ENST00000540998 MOB1BQ7L9L4 216 aa8.6□□□□□ -1.03
CDC42SE1-207ENST00000540998 C1orf159Q96HA4 380 aa8.6□□□□□ -1.03
CDC42SE1-207ENST00000540998 RELNP78509 3460 aa8.6□□□□□ -1.03
CDC42SE1-207ENST00000540998 ZZEF1O43149 2961 aa8.6□□□□□ -1.03
CDC42SE1-207ENST00000540998 CACNA1HO95180 2353 aa8.6□□□□□ -1.03
CDC42SE1-207ENST00000540998 TANC2Q9HCD6 1990 aa8.59□□□□□ -1.03
CDC42SE1-207ENST00000540998 NPSP0C0P6 89 aa8.59□□□□□ -1.03
CDC42SE1-207ENST00000540998 IRF2P14316 349 aa8.59□□□□□ -1.03
CDC42SE1-207ENST00000540998 KITLGP21583 273 aa8.59□□□□□ -1.03
CDC42SE1-207ENST00000540998 IGHV1-2P23083 117 aa8.59□□□□□ -1.03
CDC42SE1-207ENST00000540998 DNLZQ5SXM8 178 aa8.59□□□□□ -1.03
CDC42SE1-207ENST00000540998 CNEP1R1Q8N9A8 125 aa8.59□□□□□ -1.03
CDC42SE1-207ENST00000540998 CMTM2Q8TAZ6 248 aa8.59□□□□□ -1.03
CDC42SE1-207ENST00000540998 POLDIP2Q9Y2S7 368 aa8.59□□□□□ -1.03
CDC42SE1-207ENST00000540998 MDFIC2A0A1B0GVS7 189 aa8.59□□□□□ -1.03
CDC42SE1-207ENST00000540998 RNF212BA8MTL3 300 aa8.59□□□□□ -1.03
CDC42SE1-207ENST00000540998 FAM90A26D6RGX4 464 aa8.59□□□□□ -1.03
CDC42SE1-207ENST00000540998 M0R1X1 148 aa8.59□□□□□ -1.03
CDC42SE1-207ENST00000540998 HPRT1P00492 218 aa8.59□□□□□ -1.03
CDC42SE1-207ENST00000540998 FOSL1P15407 271 aa8.59□□□□□ -1.03
CDC42SE1-207ENST00000540998 SRP14P37108 136 aaKnown RBP8.59□□□□□ -1.03
CDC42SE1-207ENST00000540998 ZNF134P52741 427 aa8.59□□□□□ -1.03
CDC42SE1-207ENST00000540998 RPL31P62899 125 aaKnown RBP8.59□□□□□ -1.03
CDC42SE1-207ENST00000540998 ZNF90Q03938 601 aa8.59□□□□□ -1.03
CDC42SE1-207ENST00000540998 CATR1Q13166 79 aa8.59□□□□□ -1.03
CDC42SE1-207ENST00000540998 C21orf62-AS1Q17RA5 79 aa8.59□□□□□ -1.03
CDC42SE1-207ENST00000540998 ACSF3Q4G176 576 aaPredicted RBP8.59□□□□□ -1.03
CDC42SE1-207ENST00000540998 WDR83OSQ9Y284 106 aa8.59□□□□□ -1.03
CDC42SE1-207ENST00000540998 TYMSP04818 313 aa8.59□□□□□ -1.04
CDC42SE1-207ENST00000540998 TDGF1P3P51864 188 aa8.59□□□□□ -1.04
CDC42SE1-207ENST00000540998 DUX4L9Q6RFH8 374 aaPredicted RBP8.59□□□□□ -1.04
CDC42SE1-207ENST00000540998 DOLPP1Q86YN1 238 aa8.59□□□□□ -1.04
CDC42SE1-207ENST00000540998 NHLRC2Q8NBF2 726 aa8.59□□□□□ -1.04
CDC42SE1-207ENST00000540998 GGTLC1Q9BX51 225 aa8.59□□□□□ -1.04
CDC42SE1-207ENST00000540998 PARD6GQ9BYG4 376 aaPredicted RBP8.59□□□□□ -1.04
CDC42SE1-207ENST00000540998 GNG12Q9UBI6 72 aa8.59□□□□□ -1.04
CDC42SE1-207ENST00000540998 CA1P00915 261 aaPredicted RBP8.58□□□□□ -1.04
CDC42SE1-207ENST00000540998 MBP02144 154 aa8.58□□□□□ -1.04
CDC42SE1-207ENST00000540998 ERVFC1-1P60608 527 aa8.58□□□□□ -1.04
CDC42SE1-207ENST00000540998 PDLIM3Q53GG5 364 aaPredicted RBP8.58□□□□□ -1.04
CDC42SE1-207ENST00000540998 CD177Q8N6Q3 437 aa8.58□□□□□ -1.04
CDC42SE1-207ENST00000540998 ZNRF1Q8ND25 227 aa8.58□□□□□ -1.04
CDC42SE1-207ENST00000540998 PARD6AQ9NPB6 346 aa8.58□□□□□ -1.04
CDC42SE1-207ENST00000540998 DSCAMO60469 2012 aa8.58□□□□□ -1.04
CDC42SE1-207ENST00000540998 CGAP01215 116 aa8.58□□□□□ -1.04
CDC42SE1-207ENST00000540998 SOX8P57073 446 aa8.58□□□□□ -1.04
CDC42SE1-207ENST00000540998 UBE2NP61088 152 aaKnown RBP8.58□□□□□ -1.04
CDC42SE1-207ENST00000540998 SRSF6Q13247 344 aaKnown RBP8.58□□□□□ -1.04
CDC42SE1-207ENST00000540998 TRA2AQ13595 282 aaKnown RBP eCLIP8.58□□□□□ -1.04
CDC42SE1-207ENST00000540998 MLANAQ16655 118 aa8.58□□□□□ -1.04
CDC42SE1-207ENST00000540998 WDR82Q6UXN9 313 aa8.58□□□□□ -1.04
CDC42SE1-207ENST00000540998 MRPL18Q9H0U6 180 aaKnown RBP8.58□□□□□ -1.04
CDC42SE1-207ENST00000540998 RNASE7Q9H1E1 156 aaKnown RBP8.58□□□□□ -1.04
CDC42SE1-207ENST00000540998 OOEPA6NGQ2 149 aa8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 GPR12P47775 334 aa8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 C1orf194Q5T5A4 169 aa8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 ACP7Q6ZNF0 438 aa8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 OR8I2Q8N0Y5 310 aa8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 FAM216AQ8WUB2 273 aa8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 DIRC2Q96SL1 478 aa8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 C17orf112F2Z3M2 114 aa8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 M0R143 59 aa8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 RAB29O14966 203 aa8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 ATP6V1FQ16864 119 aa8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 ARSJQ5FYB0 599 aaPredicted RBP8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 Q6ZVH6 145 aa8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 LHFPL4Q7Z7J7 247 aa8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 ATOH7Q8N100 152 aa8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 BEND2Q8NDZ0 799 aa8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 OR4P4Q8NGL7 312 aa8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 OR10G8Q8NGN5 311 aa8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 ZCCHC14Q8WYQ9 949 aaKnown RBP8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 RCHY1Q96PM5 261 aa8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 RYDENQ9NUL5 291 aaKnown RBP8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 MRPS18CQ9Y3D5 142 aaKnown RBP8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 TIMM8AO60220 97 aaPredicted RBP8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 VENTXO95231 258 aa8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 IGHV3-48P01763 117 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms