RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 STOML3Q8TAV4 291 aa11.52□□□□□ -0.56
CYB561A3-216ENST00000540755 RPEQ96AT9 228 aa11.52□□□□□ -0.56
CYB561A3-216ENST00000540755 C1orf159Q96HA4 380 aa11.52□□□□□ -0.56
CYB561A3-216ENST00000540755 TBX15Q96SF7 602 aa11.52□□□□□ -0.56
CYB561A3-216ENST00000540755 TMEM140Q9NV12 185 aa11.52□□□□□ -0.56
CYB561A3-216ENST00000540755 DPM3Q9P2X0 92 aa11.52□□□□□ -0.56
CYB561A3-216ENST00000540755 WASHC3Q9Y3C0 194 aa11.52□□□□□ -0.56
CYB561A3-216ENST00000540755 COL6A5A8TX70 2615 aa11.52□□□□□ -0.57
CYB561A3-216ENST00000540755 IGHV1-3A0A0C4DH29 117 aa11.51□□□□□ -0.57
CYB561A3-216ENST00000540755 RNASEK-C17orf49H0YIS7 233 aa11.51□□□□□ -0.57
CYB561A3-216ENST00000540755 WRBO00258 174 aa11.51□□□□□ -0.57
CYB561A3-216ENST00000540755 IGKV1-16P04430 117 aa11.51□□□□□ -0.57
CYB561A3-216ENST00000540755 OR9G9P0C7N8 305 aa11.51□□□□□ -0.57
CYB561A3-216ENST00000540755 HKR1P10072 659 aa11.51□□□□□ -0.57
CYB561A3-216ENST00000540755 CEACAM3P40198 252 aa11.51□□□□□ -0.57
CYB561A3-216ENST00000540755 PAX8Q06710 450 aa11.51□□□□□ -0.57
CYB561A3-216ENST00000540755 TPTE2P1Q5T6R2 138 aa11.51□□□□□ -0.57
CYB561A3-216ENST00000540755 EIF5AL1Q6IS14 154 aaKnown RBP11.51□□□□□ -0.57
CYB561A3-216ENST00000540755 OR8H3Q8N146 312 aa11.51□□□□□ -0.57
CYB561A3-216ENST00000540755 OR4C13Q8NGP0 309 aa11.51□□□□□ -0.57
CYB561A3-216ENST00000540755 LHX4Q969G2 390 aa11.51□□□□□ -0.57
CYB561A3-216ENST00000540755 FLYWCH2Q96CP2 140 aaKnown RBP11.51□□□□□ -0.57
CYB561A3-216ENST00000540755 RHOVQ96L33 236 aa11.51□□□□□ -0.57
CYB561A3-216ENST00000540755 LPAR2Q9HBW0 351 aa11.51□□□□□ -0.57
CYB561A3-216ENST00000540755 MED9Q9NWA0 146 aa11.51□□□□□ -0.57
CYB561A3-216ENST00000540755 HSPB7Q9UBY9 170 aa11.51□□□□□ -0.57
CYB561A3-216ENST00000540755 STAB1Q9NY15 2570 aa11.51□□□□□ -0.57
CYB561A3-216ENST00000540755 MSGN1A6NI15 193 aa11.51□□□□□ -0.57
CYB561A3-216ENST00000540755 H7C2Y5 167 aa11.51□□□□□ -0.57
CYB561A3-216ENST00000540755 SMAD7O15105 426 aaKnown RBP11.51□□□□□ -0.57
CYB561A3-216ENST00000540755 SSSCA1O60232 199 aa11.51□□□□□ -0.57
CYB561A3-216ENST00000540755 MED6O75586 246 aa11.51□□□□□ -0.57
CYB561A3-216ENST00000540755 IL6RP08887 468 aaPredicted RBP11.51□□□□□ -0.57
CYB561A3-216ENST00000540755 TPT1P13693 172 aaKnown RBP11.51□□□□□ -0.57
CYB561A3-216ENST00000540755 MINOS1Q5TGZ0 78 aa11.51□□□□□ -0.57
CYB561A3-216ENST00000540755 SSX9Q7RTT3 188 aa11.51□□□□□ -0.57
CYB561A3-216ENST00000540755 PRIMA1Q86XR5 153 aa11.51□□□□□ -0.57
CYB561A3-216ENST00000540755 RAB40CQ96S21 281 aa11.51□□□□□ -0.57
CYB561A3-216ENST00000540755 MAGT1Q9H0U3 335 aa11.51□□□□□ -0.57
CYB561A3-216ENST00000540755 SLC25A32Q9H2D1 315 aa11.51□□□□□ -0.57
CYB561A3-216ENST00000540755 CACFD1Q9UGQ2 172 aa11.51□□□□□ -0.57
CYB561A3-216ENST00000540755 MINOS1-NBL1R4GNA1 71 aa11.51□□□□□ -0.57
CYB561A3-216ENST00000540755 ANK3Q12955 4377 aaKnown RBP11.5□□□□□ -0.57
CYB561A3-216ENST00000540755 FBN3Q75N90 2809 aa11.5□□□□□ -0.57
CYB561A3-216ENST00000540755 A0A1W2PPI3 338 aa11.5□□□□□ -0.57
CYB561A3-216ENST00000540755 OOSP1A8MZH6 123 aa11.5□□□□□ -0.57
CYB561A3-216ENST00000540755 B4DSR2 109 aa11.5□□□□□ -0.57
CYB561A3-216ENST00000540755 SHOXO15266 292 aa11.5□□□□□ -0.57
CYB561A3-216ENST00000540755 KCNAB3O43448 404 aa11.5□□□□□ -0.57
CYB561A3-216ENST00000540755 SYNGR2O43760 224 aa11.5□□□□□ -0.57
CYB561A3-216ENST00000540755 NXPH3O95157 252 aa11.5□□□□□ -0.57
CYB561A3-216ENST00000540755 MSMBP08118 114 aa11.5□□□□□ -0.57
CYB561A3-216ENST00000540755 RPL12P30050 165 aaKnown RBP11.5□□□□□ -0.57
CYB561A3-216ENST00000540755 UBE2E1P51965 193 aa11.5□□□□□ -0.57
CYB561A3-216ENST00000540755 VAMP2P63027 116 aa11.5□□□□□ -0.57
CYB561A3-216ENST00000540755 RELBQ01201 579 aa11.5□□□□□ -0.57
CYB561A3-216ENST00000540755 TNFRSF9Q07011 255 aa11.5□□□□□ -0.57
CYB561A3-216ENST00000540755 LDLRAD2Q5SZI1 272 aa11.5□□□□□ -0.57
CYB561A3-216ENST00000540755 OR4A47Q6IF82 309 aa11.5□□□□□ -0.57
CYB561A3-216ENST00000540755 VKORC1L1Q8N0U8 176 aa11.5□□□□□ -0.57
CYB561A3-216ENST00000540755 OR52E5Q8NH55 327 aa11.5□□□□□ -0.57
CYB561A3-216ENST00000540755 OR4A16Q8NH70 328 aa11.5□□□□□ -0.57
CYB561A3-216ENST00000540755 ST8SIA2Q92186 375 aa11.5□□□□□ -0.57
CYB561A3-216ENST00000540755 HARBI1Q96MB7 349 aa11.5□□□□□ -0.57
CYB561A3-216ENST00000540755 BET1LQ9NYM9 111 aa11.5□□□□□ -0.57
CYB561A3-216ENST00000540755 TBL2Q9Y4P3 447 aaKnown RBP11.5□□□□□ -0.57
CYB561A3-216ENST00000540755 WNK2Q9Y3S1 2297 aa11.5□□□□□ -0.57
CYB561A3-216ENST00000540755 SRRM4A7MD48 611 aaKnown RBP11.49□□□□□ -0.57
CYB561A3-216ENST00000540755 CHST1O43916 411 aa11.49□□□□□ -0.57
CYB561A3-216ENST00000540755 GPR137BO60478 399 aa11.49□□□□□ -0.57
CYB561A3-216ENST00000540755 JTBO76095 146 aa11.49□□□□□ -0.57
CYB561A3-216ENST00000540755 CFDP00746 253 aaPredicted RBP11.49□□□□□ -0.57
CYB561A3-216ENST00000540755 UBE2KP61086 200 aa11.49□□□□□ -0.57
CYB561A3-216ENST00000540755 KRTAP1-1Q07627 177 aa11.49□□□□□ -0.57
CYB561A3-216ENST00000540755 LOXL1Q08397 574 aaPredicted RBP11.49□□□□□ -0.57
CYB561A3-216ENST00000540755 ZNF429Q86V71 674 aa11.49□□□□□ -0.57
CYB561A3-216ENST00000540755 SLC7A5P1Q8MH63 180 aa11.49□□□□□ -0.57
CYB561A3-216ENST00000540755 PUSL1Q8N0Z8 303 aaKnown RBP11.49□□□□□ -0.57
CYB561A3-216ENST00000540755 OR2C3Q8N628 320 aa11.49□□□□□ -0.57
CYB561A3-216ENST00000540755 ZNF471Q9BX82 626 aaPredicted RBP11.49□□□□□ -0.57
CYB561A3-216ENST00000540755 LYRM2Q9NU23 88 aaPredicted RBP11.49□□□□□ -0.57
CYB561A3-216ENST00000540755 AUP1Q9Y679 476 aa11.49□□□□□ -0.57
CYB561A3-216ENST00000540755 WSB1Q9Y6I7 421 aa11.49□□□□□ -0.57
CYB561A3-216ENST00000540755 TET2Q6N021 2002 aaPredicted RBP11.48□□□□□ -0.57
CYB561A3-216ENST00000540755 C15orf61A6NNL5 157 aa11.48□□□□□ -0.57
CYB561A3-216ENST00000540755 RBMXL2O75526 392 aaKnown RBP11.48□□□□□ -0.57
CYB561A3-216ENST00000540755 LY86O95711 162 aa11.48□□□□□ -0.57
CYB561A3-216ENST00000540755 TMEM50AO95807 157 aa11.48□□□□□ -0.57
CYB561A3-216ENST00000540755 LGALS7P47929 136 aa11.48□□□□□ -0.57
CYB561A3-216ENST00000540755 PAX9P55771 341 aa11.48□□□□□ -0.57
CYB561A3-216ENST00000540755 LGALS4P56470 323 aa11.48□□□□□ -0.57
CYB561A3-216ENST00000540755 TAS2R30P59541 319 aa11.48□□□□□ -0.57
CYB561A3-216ENST00000540755 HABP2Q14520 560 aaPredicted RBP11.48□□□□□ -0.57
CYB561A3-216ENST00000540755 PDLIM3Q53GG5 364 aaPredicted RBP11.48□□□□□ -0.57
CYB561A3-216ENST00000540755 MOB3BQ86TA1 216 aa11.48□□□□□ -0.57
CYB561A3-216ENST00000540755 BAP18Q8IXM2 172 aa11.48□□□□□ -0.57
CYB561A3-216ENST00000540755 OR4A5Q8NH83 315 aa11.48□□□□□ -0.57
CYB561A3-216ENST00000540755 VSTM2AQ8TAG5 236 aa11.48□□□□□ -0.57
CYB561A3-216ENST00000540755 SMIM8Q96KF7 97 aa11.48□□□□□ -0.57
CYB561A3-216ENST00000540755 QTRT1Q9BXR0 403 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms