RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 DEFB114Q30KQ6 69 aa10.66□□□□□ -0.7
SNHG1-213ENST00000540725 DEFB125Q8N687 156 aa10.66□□□□□ -0.7
SNHG1-213ENST00000540725 VSTM2AQ8TAG5 236 aa10.66□□□□□ -0.7
SNHG1-213ENST00000540725 TMEM167AQ8TBQ9 72 aa10.66□□□□□ -0.7
SNHG1-213ENST00000540725 OR2A7Q96R45 310 aa10.66□□□□□ -0.7
SNHG1-213ENST00000540725 HSD17B10Q99714 261 aaKnown RBP10.66□□□□□ -0.7
SNHG1-213ENST00000540725 FAM110AQ9BQ89 295 aa10.66□□□□□ -0.7
SNHG1-213ENST00000540725 WFDC10AQ9H1F0 79 aa10.66□□□□□ -0.7
SNHG1-213ENST00000540725 FBXL7Q9UJT9 491 aa10.66□□□□□ -0.7
SNHG1-213ENST00000540725 DMRT1Q9Y5R6 373 aa10.66□□□□□ -0.7
SNHG1-213ENST00000540725 HYDINQ4G0P3 5121 aa10.66□□□□□ -0.7
SNHG1-213ENST00000540725 DPPA5A6NC42 116 aa10.65□□□□□ -0.7
SNHG1-213ENST00000540725 NPIPB5A8MRT5 1133 aa10.65□□□□□ -0.7
SNHG1-213ENST00000540725 GGCTO75223 188 aaKnown RBP10.65□□□□□ -0.7
SNHG1-213ENST00000540725 SCGNO76038 276 aa10.65□□□□□ -0.7
SNHG1-213ENST00000540725 OR2C1O95371 312 aa10.65□□□□□ -0.7
SNHG1-213ENST00000540725 FOLR2P14207 255 aa10.65□□□□□ -0.7
SNHG1-213ENST00000540725 GNG2P59768 71 aa10.65□□□□□ -0.7
SNHG1-213ENST00000540725 EIF4EBP1Q13541 118 aaPredicted RBP10.65□□□□□ -0.7
SNHG1-213ENST00000540725 GUCA2BQ16661 112 aa10.65□□□□□ -0.7
SNHG1-213ENST00000540725 PUSL1Q8N0Z8 303 aaKnown RBP10.65□□□□□ -0.7
SNHG1-213ENST00000540725 FYTTD1Q96QD9 318 aaKnown RBP10.65□□□□□ -0.7
SNHG1-213ENST00000540725 ZC4H2Q9NQZ6 224 aa10.65□□□□□ -0.7
SNHG1-213ENST00000540725 TXNL4BQ9NX01 149 aaKnown RBP10.65□□□□□ -0.7
SNHG1-213ENST00000540725 ANXA10Q9UJ72 324 aa10.65□□□□□ -0.7
SNHG1-213ENST00000540725 SPATA2Q9UM82 520 aa10.65□□□□□ -0.7
SNHG1-213ENST00000540725 ALMS1Q8TCU4 4167 aa10.65□□□□□ -0.7
SNHG1-213ENST00000540725 A0A1B0GW64 132 aa10.65□□□□□ -0.71
SNHG1-213ENST00000540725 RBMY1BA6NDE4 496 aaKnown RBP10.65□□□□□ -0.71
SNHG1-213ENST00000540725 RBMY1EA6NEQ0 496 aaKnown RBP10.65□□□□□ -0.71
SNHG1-213ENST00000540725 E7EUB6 86 aa10.65□□□□□ -0.71
SNHG1-213ENST00000540725 LGALS9O00182 355 aa10.65□□□□□ -0.71
SNHG1-213ENST00000540725 SSX5O60225 188 aa10.65□□□□□ -0.71
SNHG1-213ENST00000540725 IGHV3-23P01764 117 aa10.65□□□□□ -0.71
SNHG1-213ENST00000540725 RBMY1DP0C7P1 496 aaKnown RBP10.65□□□□□ -0.71
SNHG1-213ENST00000540725 ZNF735P0CB33 412 aa10.65□□□□□ -0.71
SNHG1-213ENST00000540725 AREGP15514 252 aa10.65□□□□□ -0.71
SNHG1-213ENST00000540725 FGF9P31371 208 aaPredicted RBP10.65□□□□□ -0.71
SNHG1-213ENST00000540725 MAS1LP35410 378 aa10.65□□□□□ -0.71
SNHG1-213ENST00000540725 KIR2DS2P43631 304 aa10.65□□□□□ -0.71
SNHG1-213ENST00000540725 BRWD1-AS2P59051 145 aa10.65□□□□□ -0.71
SNHG1-213ENST00000540725 GABARAPL2P60520 117 aa10.65□□□□□ -0.71
SNHG1-213ENST00000540725 MFSD4AQ8N468 514 aa10.65□□□□□ -0.71
SNHG1-213ENST00000540725 WDR89Q96FK6 387 aaPredicted RBP10.65□□□□□ -0.71
SNHG1-213ENST00000540725 CCDC140Q96MF4 163 aa10.65□□□□□ -0.71
SNHG1-213ENST00000540725 FANCD2OSQ96PS1 177 aa10.65□□□□□ -0.71
SNHG1-213ENST00000540725 SRD5A3Q9H8P0 318 aa10.65□□□□□ -0.71
SNHG1-213ENST00000540725 SLC2A9Q9NRM0 540 aa10.65□□□□□ -0.71
SNHG1-213ENST00000540725 TAS2R8Q9NYW2 309 aa10.65□□□□□ -0.71
SNHG1-213ENST00000540725 TECRQ9NZ01 308 aaKnown RBP10.65□□□□□ -0.71
SNHG1-213ENST00000540725 DAPK2Q9UIK4 370 aa10.65□□□□□ -0.71
SNHG1-213ENST00000540725 OR11H12B2RN74 326 aa10.64□□□□□ -0.71
SNHG1-213ENST00000540725 MRPS14O60783 128 aaKnown RBP10.64□□□□□ -0.71
SNHG1-213ENST00000540725 NDUFB8O95169 186 aa10.64□□□□□ -0.71
SNHG1-213ENST00000540725 PSMB9P28065 219 aa10.64□□□□□ -0.71
SNHG1-213ENST00000540725 ARL3P36405 182 aa10.64□□□□□ -0.71
SNHG1-213ENST00000540725 UBE2UQ5VVX9 321 aa10.64□□□□□ -0.71
SNHG1-213ENST00000540725 CLEC19AQ6UXS0 136 aa10.64□□□□□ -0.71
SNHG1-213ENST00000540725 ZNF66Q6ZN08 573 aa10.64□□□□□ -0.71
SNHG1-213ENST00000540725 SSX9Q7RTT3 188 aa10.64□□□□□ -0.71
SNHG1-213ENST00000540725 TPRA1Q86W33 373 aa10.64□□□□□ -0.71
SNHG1-213ENST00000540725 GPHB5Q86YW7 130 aa10.64□□□□□ -0.71
SNHG1-213ENST00000540725 IL17DQ8TAD2 202 aa10.64□□□□□ -0.71
SNHG1-213ENST00000540725 LGALS14Q8TCE9 139 aa10.64□□□□□ -0.71
SNHG1-213ENST00000540725 CACNG8Q8WXS5 425 aa10.64□□□□□ -0.71
SNHG1-213ENST00000540725 GPHA2Q96T91 129 aa10.64□□□□□ -0.71
SNHG1-213ENST00000540725 RHBDL2Q9NX52 303 aa10.64□□□□□ -0.71
SNHG1-213ENST00000540725 S4R3C0 116 aa10.64□□□□□ -0.71
SNHG1-213ENST00000540725 DHFRP00374 187 aa10.63□□□□□ -0.71
SNHG1-213ENST00000540725 HRASP01112 189 aa10.63□□□□□ -0.71
SNHG1-213ENST00000540725 CRYGCP07315 174 aa10.63□□□□□ -0.71
SNHG1-213ENST00000540725 PSMB6P28072 239 aa10.63□□□□□ -0.71
SNHG1-213ENST00000540725 RPL8P62917 257 aaKnown RBP10.63□□□□□ -0.71
SNHG1-213ENST00000540725 SFXN4Q6P4A7 337 aa10.63□□□□□ -0.71
SNHG1-213ENST00000540725 RAB26Q9ULW5 256 aa10.63□□□□□ -0.71
SNHG1-213ENST00000540725 SELENOKQ9Y6D0 94 aa10.63□□□□□ -0.71
SNHG1-213ENST00000540725 JTBO76095 146 aa10.62□□□□□ -0.71
SNHG1-213ENST00000540725 MYOD1P15172 320 aa10.62□□□□□ -0.71
SNHG1-213ENST00000540725 HIST1H1BP16401 226 aaKnown RBP10.62□□□□□ -0.71
SNHG1-213ENST00000540725 CTRB1P17538 263 aa10.62□□□□□ -0.71
SNHG1-213ENST00000540725 CBLN1P23435 193 aa10.62□□□□□ -0.71
SNHG1-213ENST00000540725 ARPC4P59998 168 aa10.62□□□□□ -0.71
SNHG1-213ENST00000540725 KLK9Q2XQG4 91 aa10.62□□□□□ -0.71
SNHG1-213ENST00000540725 FAM106AQ4KMX7 169 aa10.62□□□□□ -0.71
SNHG1-213ENST00000540725 CTRB2Q6GPI1 263 aa10.62□□□□□ -0.71
SNHG1-213ENST00000540725 SLC16A13Q7RTY0 426 aa10.62□□□□□ -0.71
SNHG1-213ENST00000540725 TMEM61Q8N0U2 210 aa10.62□□□□□ -0.71
SNHG1-213ENST00000540725 SPARTQ8N0X7 666 aa10.62□□□□□ -0.71
SNHG1-213ENST00000540725 BEST4Q8NFU0 473 aa10.62□□□□□ -0.71
SNHG1-213ENST00000540725 SECTM1Q8WVN6 248 aa10.62□□□□□ -0.71
SNHG1-213ENST00000540725 EEF1AKMT3Q96AZ1 226 aa10.62□□□□□ -0.71
SNHG1-213ENST00000540725 CCL28Q9NRJ3 127 aa10.62□□□□□ -0.71
SNHG1-213ENST00000540725 KLK9Q9UKQ9 250 aa10.62□□□□□ -0.71
SNHG1-213ENST00000540725 SSR3Q9UNL2 185 aa10.62□□□□□ -0.71
SNHG1-213ENST00000540725 ZNF320A2RRD8 509 aa10.61□□□□□ -0.71
SNHG1-213ENST00000540725 TMEM213A2RRL7 107 aa10.61□□□□□ -0.71
SNHG1-213ENST00000540725 A8MWP6 167 aa10.61□□□□□ -0.71
SNHG1-213ENST00000540725 TNFSF12O43508 249 aa10.61□□□□□ -0.71
SNHG1-213ENST00000540725 REG1AP05451 166 aa10.61□□□□□ -0.71
SNHG1-213ENST00000540725 PTHLHP12272 177 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms