RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 A0A0G2JRQ6 117 aa13.15□□□□□ -0.3
UBC-208ENST00000540700 TEX13DA0A0J9YY54 714 aaPredicted RBP13.15□□□□□ -0.3
UBC-208ENST00000540700 CLPSL1A2RUU4 121 aa13.15□□□□□ -0.3
UBC-208ENST00000540700 TSPAN15O95858 294 aa13.15□□□□□ -0.3
UBC-208ENST00000540700 CA2P00918 260 aa13.15□□□□□ -0.3
UBC-208ENST00000540700 IGKV1-5P01602 117 aa13.15□□□□□ -0.3
UBC-208ENST00000540700 IGHG2P01859 326 aa13.15□□□□□ -0.3
UBC-208ENST00000540700 MYOD1P15172 320 aa13.15□□□□□ -0.3
UBC-208ENST00000540700 G6PCP35575 357 aa13.15□□□□□ -0.3
UBC-208ENST00000540700 CENPSQ8N2Z9 138 aa13.15□□□□□ -0.3
UBC-208ENST00000540700 TCTEX1D1Q8N7M0 179 aa13.15□□□□□ -0.3
UBC-208ENST00000540700 TEX45Q8NA69 505 aa13.15□□□□□ -0.3
UBC-208ENST00000540700 FAM110DQ8TAY7 271 aaPredicted RBP13.15□□□□□ -0.3
UBC-208ENST00000540700 R3HDM4Q96D70 268 aa13.15□□□□□ -0.3
UBC-208ENST00000540700 GALNT14Q96FL9 552 aa13.15□□□□□ -0.3
UBC-208ENST00000540700 SEC22AQ96IW7 307 aa13.15□□□□□ -0.3
UBC-208ENST00000540700 RHOVQ96L33 236 aa13.15□□□□□ -0.3
UBC-208ENST00000540700 PRSS22Q9GZN4 317 aa13.15□□□□□ -0.3
UBC-208ENST00000540700 COMMD9Q9P000 198 aa13.15□□□□□ -0.3
UBC-208ENST00000540700 LINC00527Q9UJ94 153 aa13.15□□□□□ -0.3
UBC-208ENST00000540700 FAM240BA0A1B0GVZ2 78 aa13.14□□□□□ -0.31
UBC-208ENST00000540700 P0C879 139 aa13.14□□□□□ -0.31
UBC-208ENST00000540700 EGR2P11161 476 aaPredicted RBP13.14□□□□□ -0.31
UBC-208ENST00000540700 NQO2P16083 231 aa13.14□□□□□ -0.31
UBC-208ENST00000540700 PLGLAQ15195 96 aa13.14□□□□□ -0.31
UBC-208ENST00000540700 IZUMO4Q1ZYL8 232 aa13.14□□□□□ -0.31
UBC-208ENST00000540700 VMA21Q3ZAQ7 101 aa13.14□□□□□ -0.31
UBC-208ENST00000540700 C10orf55Q5SWW7 151 aa13.14□□□□□ -0.31
UBC-208ENST00000540700 OR4A47Q6IF82 309 aa13.14□□□□□ -0.31
UBC-208ENST00000540700 LIN54Q6MZP7 749 aa13.14□□□□□ -0.31
UBC-208ENST00000540700 MZT2BQ6NZ67 158 aa13.14□□□□□ -0.31
UBC-208ENST00000540700 PPP1R27Q86WC6 154 aa13.14□□□□□ -0.31
UBC-208ENST00000540700 SGPP2Q8IWX5 399 aa13.14□□□□□ -0.31
UBC-208ENST00000540700 NOL4LQ96MY1 436 aaPredicted RBP13.14□□□□□ -0.31
UBC-208ENST00000540700 TMEM222Q9H0R3 208 aa13.14□□□□□ -0.31
UBC-208ENST00000540700 ZNF430Q9H8G1 570 aaPredicted RBP13.14□□□□□ -0.31
UBC-208ENST00000540700 TMEM140Q9NV12 185 aa13.14□□□□□ -0.31
UBC-208ENST00000540700 NUDT15Q9NV35 164 aa13.14□□□□□ -0.31
UBC-208ENST00000540700 RYR3Q15413 4870 aa13.14□□□□□ -0.31
UBC-208ENST00000540700 MARCH11A6NNE9 402 aa13.13□□□□□ -0.31
UBC-208ENST00000540700 KBTBD11O94819 623 aa13.13□□□□□ -0.31
UBC-208ENST00000540700 OR2A4O95047 310 aa13.13□□□□□ -0.31
UBC-208ENST00000540700 CDS2O95674 445 aa13.13□□□□□ -0.31
UBC-208ENST00000540700 KRASP01116 189 aa13.13□□□□□ -0.31
UBC-208ENST00000540700 OR9G9P0C7N8 305 aa13.13□□□□□ -0.31
UBC-208ENST00000540700 CX3CL1P78423 397 aa13.13□□□□□ -0.31
UBC-208ENST00000540700 PRSS8Q16651 343 aa13.13□□□□□ -0.31
UBC-208ENST00000540700 ANKRD55Q3KP44 614 aa13.13□□□□□ -0.31
UBC-208ENST00000540700 TMEM128Q5BJH2 165 aa13.13□□□□□ -0.31
UBC-208ENST00000540700 C10orf99Q6UWK7 81 aa13.13□□□□□ -0.31
UBC-208ENST00000540700 SELENOHQ8IZQ5 122 aaKnown RBP13.13□□□□□ -0.31
UBC-208ENST00000540700 DUSP18Q8NEJ0 188 aa13.13□□□□□ -0.31
UBC-208ENST00000540700 OR52B4Q8NGK2 314 aa13.13□□□□□ -0.31
UBC-208ENST00000540700 WIPF2Q8TF74 440 aaPredicted RBP13.13□□□□□ -0.31
UBC-208ENST00000540700 OR2A7Q96R45 310 aa13.13□□□□□ -0.31
UBC-208ENST00000540700 A0A1B0GW64 132 aa13.12□□□□□ -0.31
UBC-208ENST00000540700 DBX1A6NMT0 343 aa13.12□□□□□ -0.31
UBC-208ENST00000540700 E7EUB6 86 aa13.12□□□□□ -0.31
UBC-208ENST00000540700 ATP6V0E1O15342 81 aa13.12□□□□□ -0.31
UBC-208ENST00000540700 SFT2D2O95562 160 aa13.12□□□□□ -0.31
UBC-208ENST00000540700 HRASP01112 189 aa13.12□□□□□ -0.31
UBC-208ENST00000540700 SERPINE2P07093 398 aa13.12□□□□□ -0.31
UBC-208ENST00000540700 VDAC2P45880 294 aaPredicted RBP13.12□□□□□ -0.31
UBC-208ENST00000540700 RAB25P57735 213 aa13.12□□□□□ -0.31
UBC-208ENST00000540700 PROK1P58294 105 aa13.12□□□□□ -0.31
UBC-208ENST00000540700 SLC35E3Q7Z769 313 aa13.12□□□□□ -0.31
UBC-208ENST00000540700 TMEM167AQ8TBQ9 72 aa13.12□□□□□ -0.31
UBC-208ENST00000540700 TMEM56Q96MV1 263 aa13.12□□□□□ -0.31
UBC-208ENST00000540700 FAM103A1Q9BTL3 118 aaKnown RBP13.12□□□□□ -0.31
UBC-208ENST00000540700 WNT10AQ9GZT5 417 aa13.12□□□□□ -0.31
UBC-208ENST00000540700 BET1LQ9NYM9 111 aa13.12□□□□□ -0.31
UBC-208ENST00000540700 NSG2Q9Y328 171 aa13.12□□□□□ -0.31
UBC-208ENST00000540700 RNF114Q9Y508 228 aa13.12□□□□□ -0.31
UBC-208ENST00000540700 TMEM56-RWDD3S4R434 201 aa13.12□□□□□ -0.31
UBC-208ENST00000540700 C9orf170A2RU37 121 aa13.11□□□□□ -0.31
UBC-208ENST00000540700 CGB1A6NKQ9 187 aa13.11□□□□□ -0.31
UBC-208ENST00000540700 UPK2O00526 184 aa13.11□□□□□ -0.31
UBC-208ENST00000540700 PRB2P02812 416 aaPredicted RBP13.11□□□□□ -0.31
UBC-208ENST00000540700 OR4E1P0C645 316 aa13.11□□□□□ -0.31
UBC-208ENST00000540700 MECP2P51608 486 aaKnown RBP13.11□□□□□ -0.31
UBC-208ENST00000540700 TRIM16LQ309B1 348 aa13.11□□□□□ -0.31
UBC-208ENST00000540700 DMBX1Q8NFW5 382 aa13.11□□□□□ -0.31
UBC-208ENST00000540700 OR2T6Q8NHC8 308 aa13.11□□□□□ -0.31
UBC-208ENST00000540700 ENKURQ8TC29 256 aa13.11□□□□□ -0.31
UBC-208ENST00000540700 OR51J1Q9H342 316 aa13.11□□□□□ -0.31
UBC-208ENST00000540700 NUBP2Q9Y5Y2 271 aa13.11□□□□□ -0.31
UBC-208ENST00000540700 B3GALNT1O75752 331 aa13.1□□□□□ -0.31
UBC-208ENST00000540700 H2AFB2P0C5Z0 115 aa13.1□□□□□ -0.31
UBC-208ENST00000540700 VAMP1P23763 118 aa13.1□□□□□ -0.31
UBC-208ENST00000540700 GNB1P62873 340 aa13.1□□□□□ -0.31
UBC-208ENST00000540700 CFHR3Q02985 330 aa13.1□□□□□ -0.31
UBC-208ENST00000540700 DHRS2Q13268 280 aa13.1□□□□□ -0.31
UBC-208ENST00000540700 C19orf54Q5BKX5 351 aa13.1□□□□□ -0.31
UBC-208ENST00000540700 ASPHD1Q5U4P2 390 aa13.1□□□□□ -0.31
UBC-208ENST00000540700 TMEM268Q5VZI3 342 aa13.1□□□□□ -0.31
UBC-208ENST00000540700 ZNF562Q6V9R5 426 aa13.1□□□□□ -0.31
UBC-208ENST00000540700 Q6ZRM9 215 aa13.1□□□□□ -0.31
UBC-208ENST00000540700 CASTOR1Q8WTX7 329 aa13.1□□□□□ -0.31
UBC-208ENST00000540700 SEC22CQ9BRL7 303 aa13.1□□□□□ -0.31
UBC-208ENST00000540700 PALMDQ9NP74 551 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms