RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 RNASE1P07998 156 aaKnown RBP8.38□□□□□ -1.07
VPS33A-204ENST00000540669 FAM106CPP0CH98 169 aa8.38□□□□□ -1.07
VPS33A-204ENST00000540669 SULT1A3P0DMM9 295 aa8.38□□□□□ -1.07
VPS33A-204ENST00000540669 SULT1A4P0DMN0 295 aa8.38□□□□□ -1.07
VPS33A-204ENST00000540669 SLC25A6P12236 298 aa8.38□□□□□ -1.07
VPS33A-204ENST00000540669 F2RL1P55085 397 aa8.38□□□□□ -1.07
VPS33A-204ENST00000540669 RPL15P61313 204 aaKnown RBP8.38□□□□□ -1.07
VPS33A-204ENST00000540669 SRSF4Q08170 494 aaKnown RBP8.38□□□□□ -1.07
VPS33A-204ENST00000540669 C5orf64Q2M2E5 130 aa8.38□□□□□ -1.07
VPS33A-204ENST00000540669 C2orf68Q2NKX9 166 aa8.38□□□□□ -1.07
VPS33A-204ENST00000540669 OXLD1Q5BKU9 147 aa8.38□□□□□ -1.07
VPS33A-204ENST00000540669 TMEM268Q5VZI3 342 aa8.38□□□□□ -1.07
VPS33A-204ENST00000540669 C11orf88Q6PI97 169 aa8.38□□□□□ -1.07
VPS33A-204ENST00000540669 LYZL2Q7Z4W2 148 aa8.38□□□□□ -1.07
VPS33A-204ENST00000540669 LGI3Q8N145 548 aa8.38□□□□□ -1.07
VPS33A-204ENST00000540669 TEX45Q8NA69 505 aa8.38□□□□□ -1.07
VPS33A-204ENST00000540669 OR5M8Q8NGP6 311 aa8.38□□□□□ -1.07
VPS33A-204ENST00000540669 TSNAXQ99598 290 aaKnown RBP8.38□□□□□ -1.07
VPS33A-204ENST00000540669 RAB18Q9NP72 206 aa8.38□□□□□ -1.07
VPS33A-204ENST00000540669 TMEM14BQ9NUH8 114 aa8.38□□□□□ -1.07
VPS33A-204ENST00000540669 TMEM140Q9NV12 185 aa8.38□□□□□ -1.07
VPS33A-204ENST00000540669 PITPNC1Q9UKF7 332 aa8.38□□□□□ -1.07
VPS33A-204ENST00000540669 SIGLEC9Q9Y336 463 aa8.38□□□□□ -1.07
VPS33A-204ENST00000540669 MOB4Q9Y3A3 225 aa8.38□□□□□ -1.07
VPS33A-204ENST00000540669 TMED3Q9Y3Q3 217 aa8.38□□□□□ -1.07
VPS33A-204ENST00000540669 MMP24Q9Y5R2 645 aa8.38□□□□□ -1.07
VPS33A-204ENST00000540669 ANK2Q01484 3957 aa8.37□□□□□ -1.07
VPS33A-204ENST00000540669 A0A1B0GW64 132 aa8.37□□□□□ -1.07
VPS33A-204ENST00000540669 C15orf61A6NNL5 157 aa8.37□□□□□ -1.07
VPS33A-204ENST00000540669 H7C2Y5 167 aa8.37□□□□□ -1.07
VPS33A-204ENST00000540669 HRASP01112 189 aa8.37□□□□□ -1.07
VPS33A-204ENST00000540669 SERPINE2P07093 398 aa8.37□□□□□ -1.07
VPS33A-204ENST00000540669 OR9G9P0C7N8 305 aa8.37□□□□□ -1.07
VPS33A-204ENST00000540669 TMEM11P17152 192 aa8.37□□□□□ -1.07
VPS33A-204ENST00000540669 CRIP2P52943 208 aaPredicted RBP8.37□□□□□ -1.07
VPS33A-204ENST00000540669 NDPQ00604 133 aa8.37□□□□□ -1.07
VPS33A-204ENST00000540669 RELBQ01201 579 aa8.37□□□□□ -1.07
VPS33A-204ENST00000540669 C19orf54Q5BKX5 351 aa8.37□□□□□ -1.07
VPS33A-204ENST00000540669 Q6ZRM9 215 aa8.37□□□□□ -1.07
VPS33A-204ENST00000540669 ZNF429Q86V71 674 aa8.37□□□□□ -1.07
VPS33A-204ENST00000540669 VKORC1L1Q8N0U8 176 aa8.37□□□□□ -1.07
VPS33A-204ENST00000540669 Q8N2B8 174 aa8.37□□□□□ -1.07
VPS33A-204ENST00000540669 C12orf45Q8N5I9 185 aaPredicted RBP8.37□□□□□ -1.07
VPS33A-204ENST00000540669 OR4A5Q8NH83 315 aa8.37□□□□□ -1.07
VPS33A-204ENST00000540669 COQ8AQ8NI60 647 aa8.37□□□□□ -1.07
VPS33A-204ENST00000540669 PHB2Q99623 299 aa8.37□□□□□ -1.07
VPS33A-204ENST00000540669 SLC25A33Q9BSK2 321 aa8.37□□□□□ -1.07
VPS33A-204ENST00000540669 CHIAQ9BZP6 476 aa8.37□□□□□ -1.07
VPS33A-204ENST00000540669 OR51J1Q9H342 316 aa8.37□□□□□ -1.07
VPS33A-204ENST00000540669 GPN1Q9HCN4 374 aaPredicted RBP8.37□□□□□ -1.07
VPS33A-204ENST00000540669 FOXA2Q9Y261 457 aaPredicted RBP8.37□□□□□ -1.07
VPS33A-204ENST00000540669 TRAV3A0A0B4J244 114 aa8.36□□□□□ -1.07
VPS33A-204ENST00000540669 CGB1A6NKQ9 187 aa8.36□□□□□ -1.07
VPS33A-204ENST00000540669 MPTX1A8MV57 137 aa8.36□□□□□ -1.07
VPS33A-204ENST00000540669 M0QZK8 103 aa8.36□□□□□ -1.07
VPS33A-204ENST00000540669 UPK2O00526 184 aa8.36□□□□□ -1.07
VPS33A-204ENST00000540669 SHOXO15266 292 aa8.36□□□□□ -1.07
VPS33A-204ENST00000540669 SLC25A17O43808 307 aa8.36□□□□□ -1.07
VPS33A-204ENST00000540669 ADAP1O75689 374 aa8.36□□□□□ -1.07
VPS33A-204ENST00000540669 TRAPPC2P0DI81 140 aa8.36□□□□□ -1.07
VPS33A-204ENST00000540669 TRAPPC2BP0DI82 140 aa8.36□□□□□ -1.07
VPS33A-204ENST00000540669 G6PCP35575 357 aa8.36□□□□□ -1.07
VPS33A-204ENST00000540669 CBX3Q13185 183 aa8.36□□□□□ -1.07
VPS33A-204ENST00000540669 MMDQ15546 238 aa8.36□□□□□ -1.07
VPS33A-204ENST00000540669 PRSS8Q16651 343 aa8.36□□□□□ -1.07
VPS33A-204ENST00000540669 PPP1R27Q86WC6 154 aa8.36□□□□□ -1.07
VPS33A-204ENST00000540669 PRIMA1Q86XR5 153 aa8.36□□□□□ -1.07
VPS33A-204ENST00000540669 TMEM219Q86XT9 240 aa8.36□□□□□ -1.07
VPS33A-204ENST00000540669 VSTM2AQ8TAG5 236 aa8.36□□□□□ -1.07
VPS33A-204ENST00000540669 CASTOR1Q8WTX7 329 aa8.36□□□□□ -1.07
VPS33A-204ENST00000540669 AIFM2Q9BRQ8 373 aa8.36□□□□□ -1.07
VPS33A-204ENST00000540669 RANBP3Q9H6Z4 567 aaPredicted RBP8.36□□□□□ -1.07
VPS33A-204ENST00000540669 ZFAND3Q9H8U3 227 aa8.36□□□□□ -1.07
VPS33A-204ENST00000540669 FBN1P35555 2871 aaKnown RBP8.35□□□□□ -1.07
VPS33A-204ENST00000540669 A0A1B0GU03 582 aa8.35□□□□□ -1.07
VPS33A-204ENST00000540669 INS-IGF2F8WCM5 200 aa8.35□□□□□ -1.07
VPS33A-204ENST00000540669 GPR137BO60478 399 aa8.35□□□□□ -1.07
VPS33A-204ENST00000540669 ATG12O94817 140 aa8.35□□□□□ -1.07
VPS33A-204ENST00000540669 OR2A4O95047 310 aa8.35□□□□□ -1.07
VPS33A-204ENST00000540669 KRASP01116 189 aa8.35□□□□□ -1.07
VPS33A-204ENST00000540669 CRYBA1P05813 215 aa8.35□□□□□ -1.07
VPS33A-204ENST00000540669 SMCPP49901 116 aaPredicted RBP8.35□□□□□ -1.07
VPS33A-204ENST00000540669 H2BFSP57053 126 aa8.35□□□□□ -1.07
VPS33A-204ENST00000540669 RRAS2P62070 204 aaPredicted RBP8.35□□□□□ -1.07
VPS33A-204ENST00000540669 RPS16P62249 146 aaKnown RBP8.35□□□□□ -1.07
VPS33A-204ENST00000540669 UBA52P62987 128 aaKnown RBP8.35□□□□□ -1.07
VPS33A-204ENST00000540669 KLK9Q2XQG4 91 aa8.35□□□□□ -1.07
VPS33A-204ENST00000540669 VMA21Q3ZAQ7 101 aa8.35□□□□□ -1.07
VPS33A-204ENST00000540669 GGNBP1Q5YKI7 109 aa8.35□□□□□ -1.07
VPS33A-204ENST00000540669 LIN54Q6MZP7 749 aa8.35□□□□□ -1.07
VPS33A-204ENST00000540669 ZNF695Q8IW36 515 aa8.35□□□□□ -1.07
VPS33A-204ENST00000540669 OR11H7Q8NGC8 314 aa8.35□□□□□ -1.07
VPS33A-204ENST00000540669 OR4D5Q8NGN0 318 aa8.35□□□□□ -1.07
VPS33A-204ENST00000540669 GPR146Q96CH1 333 aa8.35□□□□□ -1.07
VPS33A-204ENST00000540669 OR2A7Q96R45 310 aa8.35□□□□□ -1.07
VPS33A-204ENST00000540669 FBXL15Q9H469 300 aa8.35□□□□□ -1.07
VPS33A-204ENST00000540669 C11orf1Q9H5F2 150 aa8.35□□□□□ -1.07
VPS33A-204ENST00000540669 ZNF430Q9H8G1 570 aaPredicted RBP8.35□□□□□ -1.07
VPS33A-204ENST00000540669 KLK9Q9UKQ9 250 aa8.35□□□□□ -1.07
VPS33A-204ENST00000540669 ZNF257Q9Y2Q1 563 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms