RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 PRDX2P32119 198 aa10.19□□□□□ -0.78
NPC1-202ENST00000540608 YPEL3P61236 119 aaPredicted RBP10.19□□□□□ -0.78
NPC1-202ENST00000540608 LTC4SQ16873 150 aa10.19□□□□□ -0.78
NPC1-202ENST00000540608 MORN2Q502X0 79 aa10.19□□□□□ -0.78
NPC1-202ENST00000540608 GGTLC1Q9BX51 225 aa10.19□□□□□ -0.78
NPC1-202ENST00000540608 CLCF1Q9UBD9 225 aa10.19□□□□□ -0.78
NPC1-202ENST00000540608 ZFHX4Q86UP3 3567 aa10.18□□□□□ -0.78
NPC1-202ENST00000540608 GFRA3O60609 400 aa10.18□□□□□ -0.78
NPC1-202ENST00000540608 MIC13Q5XKP0 118 aa10.18□□□□□ -0.78
NPC1-202ENST00000540608 FAM90A1Q86YD7 464 aa10.18□□□□□ -0.78
NPC1-202ENST00000540608 TMEM256Q8N2U0 113 aa10.18□□□□□ -0.78
NPC1-202ENST00000540608 TMEM178AQ8NBL3 297 aa10.18□□□□□ -0.78
NPC1-202ENST00000540608 Q8TCH9 128 aa10.18□□□□□ -0.78
NPC1-202ENST00000540608 SDSLQ96GA7 329 aa10.18□□□□□ -0.78
NPC1-202ENST00000540608 MSL2Q9HCI7 577 aa10.18□□□□□ -0.78
NPC1-202ENST00000540608 YPEL1O60688 119 aa10.18□□□□□ -0.78
NPC1-202ENST00000540608 SCGB1D1O95968 90 aa10.18□□□□□ -0.78
NPC1-202ENST00000540608 GCH1P30793 250 aa10.18□□□□□ -0.78
NPC1-202ENST00000540608 TIMP3P35625 211 aa10.18□□□□□ -0.78
NPC1-202ENST00000540608 FABP6P51161 128 aa10.18□□□□□ -0.78
NPC1-202ENST00000540608 RAB4BP61018 213 aa10.18□□□□□ -0.78
NPC1-202ENST00000540608 RELBQ01201 579 aa10.18□□□□□ -0.78
NPC1-202ENST00000540608 EDDM3AQ14507 147 aa10.18□□□□□ -0.78
NPC1-202ENST00000540608 OR10G8Q8NGN5 311 aa10.18□□□□□ -0.78
NPC1-202ENST00000540608 OCC1Q8TAD7 63 aa10.18□□□□□ -0.78
NPC1-202ENST00000540608 YPEL2Q96QA6 119 aa10.18□□□□□ -0.78
NPC1-202ENST00000540608 GNG12Q9UBI6 72 aa10.18□□□□□ -0.78
NPC1-202ENST00000540608 JPT1Q9UK76 154 aa10.18□□□□□ -0.78
NPC1-202ENST00000540608 FZR1Q9UM11 496 aa10.18□□□□□ -0.78
NPC1-202ENST00000540608 M0R1X1 148 aa10.17□□□□□ -0.78
NPC1-202ENST00000540608 HOXC12P31275 282 aa10.17□□□□□ -0.78
NPC1-202ENST00000540608 ERVK-16P61578 105 aa10.17□□□□□ -0.78
NPC1-202ENST00000540608 GUSBP1Q15486 140 aa10.17□□□□□ -0.78
NPC1-202ENST00000540608 CR1LQ2VPA4 569 aa10.17□□□□□ -0.78
NPC1-202ENST00000540608 ZNF718Q3SXZ3 478 aa10.17□□□□□ -0.78
NPC1-202ENST00000540608 VKORC1L1Q8N0U8 176 aa10.17□□□□□ -0.78
NPC1-202ENST00000540608 ABHD12Q8N2K0 398 aa10.17□□□□□ -0.78
NPC1-202ENST00000540608 LRRC29Q8WV35 223 aa10.17□□□□□ -0.78
NPC1-202ENST00000540608 WFIKKN1Q96NZ8 548 aa10.17□□□□□ -0.78
NPC1-202ENST00000540608 NPVFQ9HCQ7 196 aa10.17□□□□□ -0.78
NPC1-202ENST00000540608 LSM4Q9Y4Z0 139 aaKnown RBP10.17□□□□□ -0.78
NPC1-202ENST00000540608 SCO2A0A1W2PP80 73 aa10.17□□□□□ -0.78
NPC1-202ENST00000540608 NUPR1O60356 82 aa10.17□□□□□ -0.78
NPC1-202ENST00000540608 ERVFC1-1P60608 527 aa10.17□□□□□ -0.78
NPC1-202ENST00000540608 C1orf194Q5T5A4 169 aa10.17□□□□□ -0.78
NPC1-202ENST00000540608 TEX38Q6PEX7 206 aa10.17□□□□□ -0.78
NPC1-202ENST00000540608 TGIF2LXQ8IUE1 241 aa10.17□□□□□ -0.78
NPC1-202ENST00000540608 C1orf159Q96HA4 380 aa10.17□□□□□ -0.78
NPC1-202ENST00000540608 LOXL4Q96JB6 756 aa10.17□□□□□ -0.78
NPC1-202ENST00000540608 TRIB1Q96RU8 372 aa10.17□□□□□ -0.78
NPC1-202ENST00000540608 TMEM204Q9BSN7 226 aa10.17□□□□□ -0.78
NPC1-202ENST00000540608 TRAV3A0A0B4J244 114 aa10.16□□□□□ -0.78
NPC1-202ENST00000540608 A0A1B0GWJ7 208 aa10.16□□□□□ -0.78
NPC1-202ENST00000540608 AQP7O14520 342 aa10.16□□□□□ -0.78
NPC1-202ENST00000540608 SELLP14151 372 aa10.16□□□□□ -0.78
NPC1-202ENST00000540608 OR10J1P30954 320 aa10.16□□□□□ -0.78
NPC1-202ENST00000540608 ADMP35318 185 aa10.16□□□□□ -0.78
NPC1-202ENST00000540608 TCF23Q7RTU1 214 aa10.16□□□□□ -0.78
NPC1-202ENST00000540608 C1orf162Q8NEQ5 155 aaPredicted RBP10.16□□□□□ -0.78
NPC1-202ENST00000540608 PLPPR2Q96GM1 343 aa10.16□□□□□ -0.78
NPC1-202ENST00000540608 S1PR3Q99500 378 aa10.16□□□□□ -0.78
NPC1-202ENST00000540608 NAGKQ9UJ70 344 aa10.16□□□□□ -0.78
NPC1-202ENST00000540608 YTHDF2Q9Y5A9 579 aaKnown RBP10.16□□□□□ -0.78
NPC1-202ENST00000540608 TRAV9-1A0A075B6T8 112 aa10.16□□□□□ -0.78
NPC1-202ENST00000540608 CECR9P0C854 216 aa10.16□□□□□ -0.78
NPC1-202ENST00000540608 TNFSF10P50591 281 aa10.16□□□□□ -0.78
NPC1-202ENST00000540608 NUTF2P61970 127 aaKnown RBP10.16□□□□□ -0.78
NPC1-202ENST00000540608 SELENOTP62341 195 aa10.16□□□□□ -0.78
NPC1-202ENST00000540608 MZT1Q08AG7 82 aa10.16□□□□□ -0.78
NPC1-202ENST00000540608 RPL39P5Q59GN2 51 aa10.16□□□□□ -0.78
NPC1-202ENST00000540608 MBNL2Q5VZF2 373 aaKnown RBP10.16□□□□□ -0.78
NPC1-202ENST00000540608 CNEP1R1Q8N9A8 125 aa10.16□□□□□ -0.78
NPC1-202ENST00000540608 MS4A10Q96PG2 267 aa10.16□□□□□ -0.78
NPC1-202ENST00000540608 NBEAQ8NFP9 2946 aa10.16□□□□□ -0.78
NPC1-202ENST00000540608 TRGV8A0A0C4DH27 118 aa10.15□□□□□ -0.78
NPC1-202ENST00000540608 A0A1B0GUS0 222 aa10.15□□□□□ -0.78
NPC1-202ENST00000540608 GCHFRP30047 84 aa10.15□□□□□ -0.78
NPC1-202ENST00000540608 KIR2DS2P43631 304 aa10.15□□□□□ -0.78
NPC1-202ENST00000540608 ZNF134P52741 427 aa10.15□□□□□ -0.78
NPC1-202ENST00000540608 LOXL3P58215 753 aa10.15□□□□□ -0.78
NPC1-202ENST00000540608 SRSF6Q13247 344 aaKnown RBP10.15□□□□□ -0.78
NPC1-202ENST00000540608 FAM234AQ9H0X4 552 aa10.15□□□□□ -0.78
NPC1-202ENST00000540608 TMEM140Q9NV12 185 aa10.15□□□□□ -0.78
NPC1-202ENST00000540608 TCF19Q9Y242 345 aa10.15□□□□□ -0.78
NPC1-202ENST00000540608 IGKV1D-17A0A075B6S4 117 aa10.15□□□□□ -0.78
NPC1-202ENST00000540608 IL6RP08887 468 aaPredicted RBP10.15□□□□□ -0.78
NPC1-202ENST00000540608 KIR2DL2P43627 348 aaPredicted RBP10.15□□□□□ -0.78
NPC1-202ENST00000540608 SSMEM1Q8WWF3 244 aa10.15□□□□□ -0.78
NPC1-202ENST00000540608 IFI27L2Q9H2X8 130 aa10.15□□□□□ -0.78
NPC1-202ENST00000540608 IL36BQ9NZH7 164 aa10.15□□□□□ -0.78
NPC1-202ENST00000540608 POLR3KQ9Y2Y1 108 aaPredicted RBP10.15□□□□□ -0.78
NPC1-202ENST00000540608 HCFC1P51610 2035 aa10.15□□□□□ -0.79
NPC1-202ENST00000540608 F2RL2O00254 374 aa10.14□□□□□ -0.79
NPC1-202ENST00000540608 MGST3O14880 152 aa10.14□□□□□ -0.79
NPC1-202ENST00000540608 EREGO14944 169 aa10.14□□□□□ -0.79
NPC1-202ENST00000540608 IGHG3P01860 377 aa10.14□□□□□ -0.79
NPC1-202ENST00000540608 HNF1AP20823 631 aa10.14□□□□□ -0.79
NPC1-202ENST00000540608 RHOBP62745 196 aa10.14□□□□□ -0.79
NPC1-202ENST00000540608 ZNF90Q03938 601 aa10.14□□□□□ -0.79
NPC1-202ENST00000540608 EFNB3Q15768 340 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms