RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 C1QTNF9P0C862 333 aa11.62□□□□□ -0.55
UBE3B-210ENST00000539599 GNB1P62873 340 aa11.62□□□□□ -0.55
UBE3B-210ENST00000539599 GAMTQ14353 236 aa11.62□□□□□ -0.55
UBE3B-210ENST00000539599 OR13D1Q8NGV5 346 aa11.62□□□□□ -0.55
UBE3B-210ENST00000539599 OR4A16Q8NH70 328 aa11.62□□□□□ -0.55
UBE3B-210ENST00000539599 HSD17B10Q99714 261 aaKnown RBP11.62□□□□□ -0.55
UBE3B-210ENST00000539599 APC2O95996 2303 aa11.61□□□□□ -0.55
UBE3B-210ENST00000539599 TPRP12270 2363 aaKnown RBP11.61□□□□□ -0.55
UBE3B-210ENST00000539599 H7BYZ3 331 aa11.61□□□□□ -0.55
UBE3B-210ENST00000539599 NDUFB4O95168 129 aa11.61□□□□□ -0.55
UBE3B-210ENST00000539599 CENPVQ7Z7K6 275 aaPredicted RBP11.61□□□□□ -0.55
UBE3B-210ENST00000539599 FAM90A1Q86YD7 464 aa11.61□□□□□ -0.55
UBE3B-210ENST00000539599 TMEM37Q8WXS4 190 aa11.61□□□□□ -0.55
UBE3B-210ENST00000539599 C1orf159Q96HA4 380 aa11.61□□□□□ -0.55
UBE3B-210ENST00000539599 TMEM140Q9NV12 185 aa11.61□□□□□ -0.55
UBE3B-210ENST00000539599 TIMM9Q9Y5J7 89 aa11.61□□□□□ -0.55
UBE3B-210ENST00000539599 RAI1Q7Z5J4 1906 aaPredicted RBP11.61□□□□□ -0.55
UBE3B-210ENST00000539599 PLXNB1O43157 2135 aa11.61□□□□□ -0.55
UBE3B-210ENST00000539599 FAM27E3Q08E93 113 aa11.61□□□□□ -0.55
UBE3B-210ENST00000539599 TREML4Q6UXN2 200 aa11.61□□□□□ -0.55
UBE3B-210ENST00000539599 ZNF66Q6ZN08 573 aa11.61□□□□□ -0.55
UBE3B-210ENST00000539599 MGST2Q99735 147 aa11.61□□□□□ -0.55
UBE3B-210ENST00000539599 CT45A1Q5HYN5 189 aa11.6□□□□□ -0.55
UBE3B-210ENST00000539599 MBNL2Q5VZF2 373 aaKnown RBP11.6□□□□□ -0.55
UBE3B-210ENST00000539599 FAM216BQ8N7L0 139 aa11.6□□□□□ -0.55
UBE3B-210ENST00000539599 OR10A7Q8NGE5 316 aa11.6□□□□□ -0.55
UBE3B-210ENST00000539599 CT45A3Q8NHU0 189 aa11.6□□□□□ -0.55
UBE3B-210ENST00000539599 PARD6GQ9BYG4 376 aaPredicted RBP11.6□□□□□ -0.55
UBE3B-210ENST00000539599 GFOD1Q9NXC2 390 aa11.6□□□□□ -0.55
UBE3B-210ENST00000539599 CALYQ9NYX4 217 aa11.6□□□□□ -0.55
UBE3B-210ENST00000539599 WASF3Q9UPY6 502 aa11.6□□□□□ -0.55
UBE3B-210ENST00000539599 FAM215AQ9Y5M1 114 aa11.6□□□□□ -0.55
UBE3B-210ENST00000539599 SAA2-SAA4A0A096LPE2 208 aa11.6□□□□□ -0.55
UBE3B-210ENST00000539599 NDUFS6O75380 124 aaKnown RBP11.6□□□□□ -0.55
UBE3B-210ENST00000539599 FOXH1O75593 365 aa11.6□□□□□ -0.55
UBE3B-210ENST00000539599 SAA2P0DJI9 122 aaPredicted RBP11.6□□□□□ -0.55
UBE3B-210ENST00000539599 ARL14EPLP0DKL9 152 aa11.6□□□□□ -0.55
UBE3B-210ENST00000539599 RELBQ01201 579 aa11.6□□□□□ -0.55
UBE3B-210ENST00000539599 CCL13Q99616 98 aa11.6□□□□□ -0.55
UBE3B-210ENST00000539599 HIST1H2BLQ99880 126 aa11.6□□□□□ -0.55
UBE3B-210ENST00000539599 SH3BGRL2Q9UJC5 107 aa11.6□□□□□ -0.55
UBE3B-210ENST00000539599 FUT9Q9Y231 359 aa11.6□□□□□ -0.55
UBE3B-210ENST00000539599 TRBV20OR9-2A0A075B6H5 130 aa11.59□□□□□ -0.55
UBE3B-210ENST00000539599 PIGBOS1A0A0B4J2F0 54 aa11.59□□□□□ -0.55
UBE3B-210ENST00000539599 HOXB1P14653 301 aaPredicted RBP11.59□□□□□ -0.55
UBE3B-210ENST00000539599 ASPHD1Q5U4P2 390 aa11.59□□□□□ -0.55
UBE3B-210ENST00000539599 PIP4P1Q86T03 277 aa11.59□□□□□ -0.55
UBE3B-210ENST00000539599 LYG1Q8N1E2 194 aa11.59□□□□□ -0.55
UBE3B-210ENST00000539599 MRPL37Q9BZE1 423 aaKnown RBP11.59□□□□□ -0.55
UBE3B-210ENST00000539599 PRDM13Q9H4Q3 707 aa11.59□□□□□ -0.55
UBE3B-210ENST00000539599 WDR83OSQ9Y284 106 aa11.59□□□□□ -0.55
UBE3B-210ENST00000539599 ASH1LQ9NR48 2969 aaKnown RBP11.59□□□□□ -0.55
UBE3B-210ENST00000539599 NAV3Q8IVL0 2385 aa11.59□□□□□ -0.55
UBE3B-210ENST00000539599 TRBV24-1A0A075B6N3 115 aa11.59□□□□□ -0.55
UBE3B-210ENST00000539599 GFRA3O60609 400 aa11.59□□□□□ -0.55
UBE3B-210ENST00000539599 GATA2P23769 480 aaPredicted RBP11.59□□□□□ -0.55
UBE3B-210ENST00000539599 THBS3P49746 956 aa11.59□□□□□ -0.55
UBE3B-210ENST00000539599 ATP6V1FQ16864 119 aa11.59□□□□□ -0.55
UBE3B-210ENST00000539599 C17orf58Q2M2W7 97 aa11.59□□□□□ -0.55
UBE3B-210ENST00000539599 VWC2Q2TAL6 325 aa11.59□□□□□ -0.55
UBE3B-210ENST00000539599 FAM78BQ5VT40 261 aa11.59□□□□□ -0.55
UBE3B-210ENST00000539599 NEIL1Q96FI4 390 aaPredicted RBP11.59□□□□□ -0.55
UBE3B-210ENST00000539599 PACRGQ96M98 296 aaPredicted RBP11.59□□□□□ -0.55
UBE3B-210ENST00000539599 PFDN5Q99471 154 aa11.59□□□□□ -0.55
UBE3B-210ENST00000539599 NBASA2RRP1 2371 aa11.59□□□□□ -0.55
UBE3B-210ENST00000539599 DSCAML1Q8TD84 2053 aa11.58□□□□□ -0.56
UBE3B-210ENST00000539599 AHRRA9YTQ3 701 aa11.58□□□□□ -0.56
UBE3B-210ENST00000539599 ACTL6BO94805 426 aa11.58□□□□□ -0.56
UBE3B-210ENST00000539599 GNB2P62879 340 aa11.58□□□□□ -0.56
UBE3B-210ENST00000539599 HTD2P86397 168 aa11.58□□□□□ -0.56
UBE3B-210ENST00000539599 MLANAQ16655 118 aa11.58□□□□□ -0.56
UBE3B-210ENST00000539599 IGFL2Q6UWQ7 119 aa11.58□□□□□ -0.56
UBE3B-210ENST00000539599 TCF23Q7RTU1 214 aa11.58□□□□□ -0.56
UBE3B-210ENST00000539599 RND1Q92730 232 aa11.58□□□□□ -0.56
UBE3B-210ENST00000539599 CIB3Q96Q77 187 aaPredicted RBP11.58□□□□□ -0.56
UBE3B-210ENST00000539599 S1PR3Q99500 378 aa11.58□□□□□ -0.56
UBE3B-210ENST00000539599 SEPSECSQ9HD40 501 aaKnown RBP11.58□□□□□ -0.56
UBE3B-210ENST00000539599 SCO2A0A1W2PP80 73 aa11.58□□□□□ -0.56
UBE3B-210ENST00000539599 RBFOX2O43251 390 aaKnown RBP eCLIP11.58□□□□□ -0.56
UBE3B-210ENST00000539599 HPRT1P00492 218 aa11.58□□□□□ -0.56
UBE3B-210ENST00000539599 ADH4P08319 380 aa11.58□□□□□ -0.56
UBE3B-210ENST00000539599 VDAC2P45880 294 aaPredicted RBP11.58□□□□□ -0.56
UBE3B-210ENST00000539599 ARSJQ5FYB0 599 aaPredicted RBP11.58□□□□□ -0.56
UBE3B-210ENST00000539599 C1orf162Q8NEQ5 155 aaPredicted RBP11.58□□□□□ -0.56
UBE3B-210ENST00000539599 TMEM242Q9NWH2 141 aa11.58□□□□□ -0.56
UBE3B-210ENST00000539599 TCF19Q9Y242 345 aa11.58□□□□□ -0.56
UBE3B-210ENST00000539599 PXMP4Q9Y6I8 212 aa11.58□□□□□ -0.56
UBE3B-210ENST00000539599 A0A1W2PPV4 95 aa11.57□□□□□ -0.56
UBE3B-210ENST00000539599 MGST3O14880 152 aa11.57□□□□□ -0.56
UBE3B-210ENST00000539599 IGKV1-16P04430 117 aa11.57□□□□□ -0.56
UBE3B-210ENST00000539599 GGTLC1Q9BX51 225 aa11.57□□□□□ -0.56
UBE3B-210ENST00000539599 KLF3P57682 345 aaPredicted RBP11.57□□□□□ -0.56
UBE3B-210ENST00000539599 ACOT6Q3I5F7 207 aaPredicted RBP11.57□□□□□ -0.56
UBE3B-210ENST00000539599 XKRY2A2RUG3 117 aa11.56□□□□□ -0.56
UBE3B-210ENST00000539599 PRSS46E5RG02 174 aa11.56□□□□□ -0.56
UBE3B-210ENST00000539599 TM4SF5O14894 197 aa11.56□□□□□ -0.56
UBE3B-210ENST00000539599 SNRPCP09234 159 aaKnown RBP11.56□□□□□ -0.56
UBE3B-210ENST00000539599 CCL8P80075 99 aa11.56□□□□□ -0.56
UBE3B-210ENST00000539599 PRB3Q04118 309 aaPredicted RBP11.56□□□□□ -0.56
UBE3B-210ENST00000539599 OR4A47Q6IF82 309 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms