RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 FER1L6-AS2Q96M78 137 aa8.01□□□□□ -1.13
CDH13-204ENST00000539548 WFIKKN1Q96NZ8 548 aa8.01□□□□□ -1.13
CDH13-204ENST00000539548 DCTN5Q9BTE1 182 aa8.01□□□□□ -1.13
CDH13-204ENST00000539548 ZDHHC11Q9H8X9 412 aa8.01□□□□□ -1.13
CDH13-204ENST00000539548 POLR3KQ9Y2Y1 108 aaPredicted RBP8.01□□□□□ -1.13
CDH13-204ENST00000539548 SCO2A0A1W2PP80 73 aa8.01□□□□□ -1.13
CDH13-204ENST00000539548 PAFAH1B2P68402 229 aa8.01□□□□□ -1.13
CDH13-204ENST00000539548 RELBQ01201 579 aa8.01□□□□□ -1.13
CDH13-204ENST00000539548 CR1LQ2VPA4 569 aa8.01□□□□□ -1.13
CDH13-204ENST00000539548 MORN2Q502X0 79 aa8.01□□□□□ -1.13
CDH13-204ENST00000539548 Q6ZT83 130 aa8.01□□□□□ -1.13
CDH13-204ENST00000539548 FAM90A1Q86YD7 464 aa8.01□□□□□ -1.13
CDH13-204ENST00000539548 Q8TCH9 128 aa8.01□□□□□ -1.13
CDH13-204ENST00000539548 SNHG12Q9BXW3 62 aa8.01□□□□□ -1.13
CDH13-204ENST00000539548 NPVFQ9HCQ7 196 aa8.01□□□□□ -1.13
CDH13-204ENST00000539548 IL17BQ9UHF5 180 aa8.01□□□□□ -1.13
CDH13-204ENST00000539548 LSM4Q9Y4Z0 139 aaKnown RBP8.01□□□□□ -1.13
CDH13-204ENST00000539548 LY96Q9Y6Y9 160 aa8.01□□□□□ -1.13
CDH13-204ENST00000539548 TET2Q6N021 2002 aaPredicted RBP8.01□□□□□ -1.13
CDH13-204ENST00000539548 A0A1B0GUS0 222 aa8□□□□□ -1.13
CDH13-204ENST00000539548 C19orf67A6NJJ6 358 aa8□□□□□ -1.13
CDH13-204ENST00000539548 M0R143 59 aa8□□□□□ -1.13
CDH13-204ENST00000539548 AQP7O14520 342 aa8□□□□□ -1.13
CDH13-204ENST00000539548 TIMM8AO60220 97 aaPredicted RBP8□□□□□ -1.13
CDH13-204ENST00000539548 YPEL1O60688 119 aa8□□□□□ -1.13
CDH13-204ENST00000539548 IGKV3-15P01624 115 aa8□□□□□ -1.13
CDH13-204ENST00000539548 ESDP10768 282 aa8□□□□□ -1.13
CDH13-204ENST00000539548 GCHFRP30047 84 aa8□□□□□ -1.13
CDH13-204ENST00000539548 PRDX2P32119 198 aa8□□□□□ -1.13
CDH13-204ENST00000539548 ERVK-16P61578 105 aa8□□□□□ -1.13
CDH13-204ENST00000539548 TCF23Q7RTU1 214 aa8□□□□□ -1.13
CDH13-204ENST00000539548 C1orf210Q8IVY1 113 aa8□□□□□ -1.13
CDH13-204ENST00000539548 SDSLQ96GA7 329 aa8□□□□□ -1.13
CDH13-204ENST00000539548 C1orf159Q96HA4 380 aa8□□□□□ -1.13
CDH13-204ENST00000539548 YPEL2Q96QA6 119 aa8□□□□□ -1.13
CDH13-204ENST00000539548 IL36BQ9NZH7 164 aa8□□□□□ -1.13
CDH13-204ENST00000539548 CLCF1Q9UBD9 225 aa8□□□□□ -1.13
CDH13-204ENST00000539548 JPT1Q9UK76 154 aa8□□□□□ -1.13
CDH13-204ENST00000539548 YTHDF2Q9Y5A9 579 aaKnown RBP8□□□□□ -1.13
CDH13-204ENST00000539548 A0A1B0GWJ7 208 aa8□□□□□ -1.13
CDH13-204ENST00000539548 C9JCJ5 164 aa8□□□□□ -1.13
CDH13-204ENST00000539548 M0R1X1 148 aa8□□□□□ -1.13
CDH13-204ENST00000539548 AGFG2O95081 481 aa8□□□□□ -1.13
CDH13-204ENST00000539548 KIR2DS2P43631 304 aa8□□□□□ -1.13
CDH13-204ENST00000539548 ARG2P78540 354 aa8□□□□□ -1.13
CDH13-204ENST00000539548 FAM214BQ7L5A3 538 aa8□□□□□ -1.13
CDH13-204ENST00000539548 ABHD12Q8N2K0 398 aa8□□□□□ -1.13
CDH13-204ENST00000539548 CMTM2Q8TAZ6 248 aa8□□□□□ -1.13
CDH13-204ENST00000539548 ZCCHC14Q8WYQ9 949 aaKnown RBP8□□□□□ -1.13
CDH13-204ENST00000539548 C11orf52Q96A22 123 aa8□□□□□ -1.13
CDH13-204ENST00000539548 TMEM106BQ9NUM4 274 aa8□□□□□ -1.13
CDH13-204ENST00000539548 GNG12Q9UBI6 72 aa8□□□□□ -1.13
CDH13-204ENST00000539548 TRGV10A0A0A0MS01 117 aa7.99□□□□□ -1.13
CDH13-204ENST00000539548 TRAV3A0A0B4J244 114 aa7.99□□□□□ -1.13
CDH13-204ENST00000539548 TRGV8A0A0C4DH27 118 aa7.99□□□□□ -1.13
CDH13-204ENST00000539548 MT-CO2P00403 227 aa7.99□□□□□ -1.13
CDH13-204ENST00000539548 IL6RP08887 468 aaPredicted RBP7.99□□□□□ -1.13
CDH13-204ENST00000539548 RAB4AP20338 218 aa7.99□□□□□ -1.13
CDH13-204ENST00000539548 TPPP2P59282 170 aa7.99□□□□□ -1.13
CDH13-204ENST00000539548 RHOBP62745 196 aa7.99□□□□□ -1.13
CDH13-204ENST00000539548 ZNF90Q03938 601 aa7.99□□□□□ -1.13
CDH13-204ENST00000539548 GUSBP1Q15486 140 aa7.99□□□□□ -1.13
CDH13-204ENST00000539548 LPAL2Q16609 132 aa7.99□□□□□ -1.13
CDH13-204ENST00000539548 LTC4SQ16873 150 aa7.99□□□□□ -1.13
CDH13-204ENST00000539548 MRPL52Q86TS9 123 aaKnown RBP7.99□□□□□ -1.13
CDH13-204ENST00000539548 LRRC29Q8WV35 223 aa7.99□□□□□ -1.13
CDH13-204ENST00000539548 TBX15Q96SF7 602 aa7.99□□□□□ -1.13
CDH13-204ENST00000539548 CBLN4Q9NTU7 201 aa7.99□□□□□ -1.13
CDH13-204ENST00000539548 TP53TG3Q9ULZ0 132 aa7.99□□□□□ -1.13
CDH13-204ENST00000539548 TCF19Q9Y242 345 aa7.99□□□□□ -1.13
CDH13-204ENST00000539548 ZNF318Q5VUA4 2279 aa7.99□□□□□ -1.13
CDH13-204ENST00000539548 FAM186AA6NE01 2351 aa7.99□□□□□ -1.13
CDH13-204ENST00000539548 ZNF705FA8MVS1 300 aaPredicted RBP7.98□□□□□ -1.13
CDH13-204ENST00000539548 A8MXE2 369 aa7.98□□□□□ -1.13
CDH13-204ENST00000539548 K7EN84 100 aa7.98□□□□□ -1.13
CDH13-204ENST00000539548 F2RL2O00254 374 aa7.98□□□□□ -1.13
CDH13-204ENST00000539548 ZNF705DP0CH99 300 aaPredicted RBP7.98□□□□□ -1.13
CDH13-204ENST00000539548 ZNF705BP0CI00 300 aaPredicted RBP7.98□□□□□ -1.13
CDH13-204ENST00000539548 AREGP15514 252 aa7.98□□□□□ -1.13
CDH13-204ENST00000539548 RPL29P47914 159 aaKnown RBP7.98□□□□□ -1.13
CDH13-204ENST00000539548 FABP6P51161 128 aa7.98□□□□□ -1.13
CDH13-204ENST00000539548 LGALS4P56470 323 aa7.98□□□□□ -1.13
CDH13-204ENST00000539548 LOXL3P58215 753 aa7.98□□□□□ -1.13
CDH13-204ENST00000539548 RPL31P62899 125 aaKnown RBP7.98□□□□□ -1.13
CDH13-204ENST00000539548 NHLH1Q02575 133 aa7.98□□□□□ -1.13
CDH13-204ENST00000539548 MZT1Q08AG7 82 aa7.98□□□□□ -1.13
CDH13-204ENST00000539548 EDDM3AQ14507 147 aa7.98□□□□□ -1.13
CDH13-204ENST00000539548 EFNB3Q15768 340 aa7.98□□□□□ -1.13
CDH13-204ENST00000539548 TEPPQ6URK8 271 aa7.98□□□□□ -1.13
CDH13-204ENST00000539548 VKORC1L1Q8N0U8 176 aa7.98□□□□□ -1.13
CDH13-204ENST00000539548 GCNT2Q8N0V5 402 aa7.98□□□□□ -1.13
CDH13-204ENST00000539548 TMEM178AQ8NBL3 297 aa7.98□□□□□ -1.13
CDH13-204ENST00000539548 C1orf162Q8NEQ5 155 aaPredicted RBP7.98□□□□□ -1.13
CDH13-204ENST00000539548 UHRF2Q96PU4 802 aa7.98□□□□□ -1.13
CDH13-204ENST00000539548 S1PR3Q99500 378 aa7.98□□□□□ -1.13
CDH13-204ENST00000539548 OPN3Q9H1Y3 402 aaPredicted RBP7.98□□□□□ -1.13
CDH13-204ENST00000539548 MSL2Q9HCI7 577 aa7.98□□□□□ -1.13
CDH13-204ENST00000539548 TMEM140Q9NV12 185 aa7.98□□□□□ -1.13
CDH13-204ENST00000539548 AHCTF1Q8WYP5 2266 aa7.98□□□□□ -1.13
CDH13-204ENST00000539548 GRIFINA4D1Z8 144 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms