RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 LINC01551Q86U37 167 aa10.45□□□□□ -0.74
SFSWAP-208ENST00000539506 MRGPRDQ8TDS7 321 aa10.45□□□□□ -0.74
SFSWAP-208ENST00000539506 DTD1Q8TEA8 209 aa10.45□□□□□ -0.74
SFSWAP-208ENST00000539506 CACNA1HO95180 2353 aa10.45□□□□□ -0.74
SFSWAP-208ENST00000539506 EP300Q09472 2414 aaPredicted RBP10.45□□□□□ -0.74
SFSWAP-208ENST00000539506 SCO2A0A1W2PP80 73 aa10.45□□□□□ -0.74
SFSWAP-208ENST00000539506 IGKV3-15P01624 115 aa10.45□□□□□ -0.74
SFSWAP-208ENST00000539506 IGHG3P01860 377 aa10.45□□□□□ -0.74
SFSWAP-208ENST00000539506 P0C879 139 aa10.45□□□□□ -0.74
SFSWAP-208ENST00000539506 MRPL49Q13405 166 aaKnown RBP10.45□□□□□ -0.74
SFSWAP-208ENST00000539506 Q6ZWC4 215 aa10.45□□□□□ -0.74
SFSWAP-208ENST00000539506 ATOH7Q8N100 152 aa10.45□□□□□ -0.74
SFSWAP-208ENST00000539506 LIN7CQ9NUP9 197 aaKnown RBP10.45□□□□□ -0.74
SFSWAP-208ENST00000539506 HBZP02008 142 aa10.44□□□□□ -0.74
SFSWAP-208ENST00000539506 CDC34P49427 236 aaPredicted RBP10.44□□□□□ -0.74
SFSWAP-208ENST00000539506 TCL1AP56279 114 aa10.44□□□□□ -0.74
SFSWAP-208ENST00000539506 TTC28Q96AY4 2481 aa10.44□□□□□ -0.74
SFSWAP-208ENST00000539506 A0A1W2PPV4 95 aa10.44□□□□□ -0.74
SFSWAP-208ENST00000539506 AQP7O14520 342 aa10.44□□□□□ -0.74
SFSWAP-208ENST00000539506 TGOLN2O43493 480 aa10.44□□□□□ -0.74
SFSWAP-208ENST00000539506 SERF1AO75920 110 aa10.44□□□□□ -0.74
SFSWAP-208ENST00000539506 COX5AP20674 150 aa10.44□□□□□ -0.74
SFSWAP-208ENST00000539506 SSTR5P35346 364 aa10.44□□□□□ -0.74
SFSWAP-208ENST00000539506 KRTDAPP60985 99 aa10.44□□□□□ -0.74
SFSWAP-208ENST00000539506 KCNIP4Q6PIL6 250 aa10.44□□□□□ -0.74
SFSWAP-208ENST00000539506 WDR82Q6UXN9 313 aa10.44□□□□□ -0.74
SFSWAP-208ENST00000539506 ZNF645Q8N7E2 425 aa10.44□□□□□ -0.74
SFSWAP-208ENST00000539506 CMTM2Q8TAZ6 248 aa10.44□□□□□ -0.74
SFSWAP-208ENST00000539506 ACY3Q96HD9 319 aa10.44□□□□□ -0.74
SFSWAP-208ENST00000539506 ZNF318Q5VUA4 2279 aa10.44□□□□□ -0.74
SFSWAP-208ENST00000539506 HEATR1Q9H583 2144 aaKnown RBP10.44□□□□□ -0.74
SFSWAP-208ENST00000539506 CLDN14O95500 239 aa10.44□□□□□ -0.74
SFSWAP-208ENST00000539506 CD82P27701 267 aa10.44□□□□□ -0.74
SFSWAP-208ENST00000539506 FABP6P51161 128 aa10.44□□□□□ -0.74
SFSWAP-208ENST00000539506 CFAP161Q6P656 301 aa10.44□□□□□ -0.74
SFSWAP-208ENST00000539506 INO80CQ6PI98 192 aaPredicted RBP10.44□□□□□ -0.74
SFSWAP-208ENST00000539506 TMEM14EPQ6UXP3 125 aa10.44□□□□□ -0.74
SFSWAP-208ENST00000539506 ACP7Q6ZNF0 438 aa10.44□□□□□ -0.74
SFSWAP-208ENST00000539506 ATMQ13315 3056 aa10.43□□□□□ -0.74
SFSWAP-208ENST00000539506 ACTL6BO94805 426 aa10.43□□□□□ -0.74
SFSWAP-208ENST00000539506 CECR9P0C854 216 aa10.43□□□□□ -0.74
SFSWAP-208ENST00000539506 IER3P46695 156 aa10.43□□□□□ -0.74
SFSWAP-208ENST00000539506 ZNF90Q03938 601 aa10.43□□□□□ -0.74
SFSWAP-208ENST00000539506 MIC13Q5XKP0 118 aa10.43□□□□□ -0.74
SFSWAP-208ENST00000539506 ERASQ7Z444 233 aa10.43□□□□□ -0.74
SFSWAP-208ENST00000539506 BAGE3Q86Y29 109 aa10.43□□□□□ -0.74
SFSWAP-208ENST00000539506 BAGE2Q86Y30 109 aa10.43□□□□□ -0.74
SFSWAP-208ENST00000539506 BEND2Q8NDZ0 799 aa10.43□□□□□ -0.74
SFSWAP-208ENST00000539506 OCC1Q8TAD7 63 aa10.43□□□□□ -0.74
SFSWAP-208ENST00000539506 GALMQ96C23 342 aa10.43□□□□□ -0.74
SFSWAP-208ENST00000539506 FAM122AQ96E09 287 aa10.43□□□□□ -0.74
SFSWAP-208ENST00000539506 SAMD10Q9BYL1 202 aa10.43□□□□□ -0.74
SFSWAP-208ENST00000539506 TNCP24821 2201 aa10.43□□□□□ -0.74
SFSWAP-208ENST00000539506 TMEM30CPA0ZSE6 113 aa10.43□□□□□ -0.74
SFSWAP-208ENST00000539506 GGCTO75223 188 aaKnown RBP10.43□□□□□ -0.74
SFSWAP-208ENST00000539506 KITLGP21583 273 aa10.43□□□□□ -0.74
SFSWAP-208ENST00000539506 GABRA2P47869 451 aa10.43□□□□□ -0.74
SFSWAP-208ENST00000539506 PCP4P48539 62 aa10.43□□□□□ -0.74
SFSWAP-208ENST00000539506 RAB4BP61018 213 aa10.43□□□□□ -0.74
SFSWAP-208ENST00000539506 MSMPQ1L6U9 139 aa10.43□□□□□ -0.74
SFSWAP-208ENST00000539506 ACOT6Q3I5F7 207 aaPredicted RBP10.43□□□□□ -0.74
SFSWAP-208ENST00000539506 TMEM95Q3KNT9 176 aa10.43□□□□□ -0.74
SFSWAP-208ENST00000539506 ARSJQ5FYB0 599 aaPredicted RBP10.43□□□□□ -0.74
SFSWAP-208ENST00000539506 SPATA31B1PQ5VZV4 182 aa10.43□□□□□ -0.74
SFSWAP-208ENST00000539506 OR13A1Q8NGR1 328 aa10.43□□□□□ -0.74
SFSWAP-208ENST00000539506 QTRT1Q9BXR0 403 aaKnown RBP10.43□□□□□ -0.74
SFSWAP-208ENST00000539506 TP53TG3Q9ULZ0 132 aa10.43□□□□□ -0.74
SFSWAP-208ENST00000539506 GOLT1BQ9Y3E0 138 aa10.43□□□□□ -0.74
SFSWAP-208ENST00000539506 TMEM210A6NLX4 147 aa10.42□□□□□ -0.74
SFSWAP-208ENST00000539506 LINC00473A8K010 186 aa10.42□□□□□ -0.74
SFSWAP-208ENST00000539506 RRHO14718 337 aa10.42□□□□□ -0.74
SFSWAP-208ENST00000539506 FOXH1O75593 365 aa10.42□□□□□ -0.74
SFSWAP-208ENST00000539506 ARL14EPLP0DKL9 152 aa10.42□□□□□ -0.74
SFSWAP-208ENST00000539506 TMEM11P17152 192 aa10.42□□□□□ -0.74
SFSWAP-208ENST00000539506 EDDM3AQ14507 147 aa10.42□□□□□ -0.74
SFSWAP-208ENST00000539506 C1orf194Q5T5A4 169 aa10.42□□□□□ -0.74
SFSWAP-208ENST00000539506 TGIF2LYQ8IUE0 185 aa10.42□□□□□ -0.74
SFSWAP-208ENST00000539506 ABHD12Q8N2K0 398 aa10.42□□□□□ -0.74
SFSWAP-208ENST00000539506 CISD2Q8N5K1 135 aaKnown RBP10.42□□□□□ -0.74
SFSWAP-208ENST00000539506 TMEM147Q9BVK8 224 aa10.42□□□□□ -0.74
SFSWAP-208ENST00000539506 LRRC30A6NM36 301 aa10.42□□□□□ -0.74
SFSWAP-208ENST00000539506 F6UZH7 168 aa10.42□□□□□ -0.74
SFSWAP-208ENST00000539506 TMEM250H0YL14 139 aa10.42□□□□□ -0.74
SFSWAP-208ENST00000539506 RPL15P61313 204 aaKnown RBP10.42□□□□□ -0.74
SFSWAP-208ENST00000539506 H2BFWTQ7Z2G1 175 aa10.42□□□□□ -0.74
SFSWAP-208ENST00000539506 HINT2Q9BX68 163 aa10.42□□□□□ -0.74
SFSWAP-208ENST00000539506 HSPB7Q9UBY9 170 aa10.42□□□□□ -0.74
SFSWAP-208ENST00000539506 PSG11Q9UQ72 335 aa10.42□□□□□ -0.74
SFSWAP-208ENST00000539506 A0A1B0GWJ7 208 aa10.42□□□□□ -0.74
SFSWAP-208ENST00000539506 PMS2P5A8MQ11 134 aa10.42□□□□□ -0.74
SFSWAP-208ENST00000539506 FXYD3Q14802 87 aa10.42□□□□□ -0.74
SFSWAP-208ENST00000539506 SPRNQ5BIV9 151 aa10.42□□□□□ -0.74
SFSWAP-208ENST00000539506 COA6Q5JTJ3 125 aaKnown RBP10.42□□□□□ -0.74
SFSWAP-208ENST00000539506 SLC35E4Q6ICL7 350 aa10.42□□□□□ -0.74
SFSWAP-208ENST00000539506 CD177Q8N6Q3 437 aa10.42□□□□□ -0.74
SFSWAP-208ENST00000539506 ANAPC16Q96DE5 110 aa10.42□□□□□ -0.74
SFSWAP-208ENST00000539506 DKK4Q9UBT3 224 aa10.42□□□□□ -0.74
SFSWAP-208ENST00000539506 TPRP12270 2363 aaKnown RBP10.41□□□□□ -0.74
SFSWAP-208ENST00000539506 SPAARA0A1B0GVQ0 90 aa10.41□□□□□ -0.74
SFSWAP-208ENST00000539506 MDFIC2A0A1B0GVS7 189 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms