RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 OR2J3O76001 311 aa16.91■□□□□ 0.3
SCARB1-206ENST00000539320 HRASP01112 189 aa16.91■□□□□ 0.3
SCARB1-206ENST00000539320 FCER2P06734 321 aa16.91■□□□□ 0.3
SCARB1-206ENST00000539320 CSN3P07498 182 aa16.91■□□□□ 0.3
SCARB1-206ENST00000539320 MAS1LP35410 378 aa16.91■□□□□ 0.3
SCARB1-206ENST00000539320 CBX5P45973 191 aa16.91■□□□□ 0.3
SCARB1-206ENST00000539320 SSX9Q7RTT3 188 aa16.91■□□□□ 0.3
SCARB1-206ENST00000539320 ZBTB34Q8NCN2 500 aa16.91■□□□□ 0.3
SCARB1-206ENST00000539320 FYTTD1Q96QD9 318 aaKnown RBP16.91■□□□□ 0.3
SCARB1-206ENST00000539320 SLC5A7Q9GZV3 580 aa16.91■□□□□ 0.3
SCARB1-206ENST00000539320 ZMAT4Q9H898 229 aa16.91■□□□□ 0.3
SCARB1-206ENST00000539320 PEMTQ9UBM1 199 aa16.91■□□□□ 0.3
SCARB1-206ENST00000539320 DNAH7Q8WXX0 4024 aa16.91■□□□□ 0.3
SCARB1-206ENST00000539320 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.9■□□□□ 0.3
SCARB1-206ENST00000539320 DPPA5A6NC42 116 aa16.9■□□□□ 0.3
SCARB1-206ENST00000539320 NPIPB5A8MRT5 1133 aa16.9■□□□□ 0.3
SCARB1-206ENST00000539320 C3orf84H3BNL1 204 aa16.9■□□□□ 0.3
SCARB1-206ENST00000539320 IL6RP08887 468 aaPredicted RBP16.9■□□□□ 0.3
SCARB1-206ENST00000539320 FXYD4P59646 89 aa16.9■□□□□ 0.3
SCARB1-206ENST00000539320 FAM209BQ5JX69 171 aa16.9■□□□□ 0.3
SCARB1-206ENST00000539320 LCN12Q6JVE5 192 aa16.9■□□□□ 0.3
SCARB1-206ENST00000539320 CROCCP3Q8IVE0 287 aa16.9■□□□□ 0.3
SCARB1-206ENST00000539320 Q8N402 240 aa16.9■□□□□ 0.3
SCARB1-206ENST00000539320 ZNF735P0CB33 412 aa16.89■□□□□ 0.29
SCARB1-206ENST00000539320 TGFBR1P36897 503 aa16.89■□□□□ 0.29
SCARB1-206ENST00000539320 RPL8P62917 257 aaKnown RBP16.89■□□□□ 0.29
SCARB1-206ENST00000539320 CATR1Q13166 79 aa16.89■□□□□ 0.29
SCARB1-206ENST00000539320 C15orf32Q32M92 178 aa16.89■□□□□ 0.29
SCARB1-206ENST00000539320 C19orf35Q6ZS72 473 aa16.89■□□□□ 0.29
SCARB1-206ENST00000539320 SPAG16Q8N0X2 631 aa16.89■□□□□ 0.29
SCARB1-206ENST00000539320 VCX3AQ9NNX9 186 aa16.89■□□□□ 0.29
SCARB1-206ENST00000539320 A0A1B0GW64 132 aa16.88■□□□□ 0.29
SCARB1-206ENST00000539320 A8MZ25 164 aa16.88■□□□□ 0.29
SCARB1-206ENST00000539320 RBFOX2O43251 390 aaKnown RBP eCLIP16.88■□□□□ 0.294e-7■■■■■ 34.5
SCARB1-206ENST00000539320 XRCC3O43542 346 aa16.88■□□□□ 0.29
SCARB1-206ENST00000539320 AIREO43918 545 aa16.88■□□□□ 0.29
SCARB1-206ENST00000539320 UBE2NLQ5JXB2 153 aa16.88■□□□□ 0.29
SCARB1-206ENST00000539320 TMEM17Q86X19 198 aa16.88■□□□□ 0.29
SCARB1-206ENST00000539320 OR5AP2Q8NGF4 316 aa16.88■□□□□ 0.29
SCARB1-206ENST00000539320 IFT46Q9NQC8 304 aa16.88■□□□□ 0.29
SCARB1-206ENST00000539320 SLC2A9Q9NRM0 540 aa16.88■□□□□ 0.29
SCARB1-206ENST00000539320 C19orf73Q9NVV2 129 aa16.88■□□□□ 0.29
SCARB1-206ENST00000539320 BET1LQ9NYM9 111 aa16.88■□□□□ 0.29
SCARB1-206ENST00000539320 MEIS3P1A6NDR6 274 aa16.87■□□□□ 0.29
SCARB1-206ENST00000539320 E7EUB6 86 aa16.87■□□□□ 0.29
SCARB1-206ENST00000539320 HLA-GP17693 338 aa16.87■□□□□ 0.29
SCARB1-206ENST00000539320 HERV-K104P61576 105 aa16.87■□□□□ 0.29
SCARB1-206ENST00000539320 OR4A47Q6IF82 309 aa16.87■□□□□ 0.29
SCARB1-206ENST00000539320 GTSCR1Q86UQ5 136 aa16.87■□□□□ 0.29
SCARB1-206ENST00000539320 OR2K2Q8NGT1 345 aa16.87■□□□□ 0.29
SCARB1-206ENST00000539320 OR4A5Q8NH83 315 aa16.87■□□□□ 0.29
SCARB1-206ENST00000539320 GIMAP1Q8WWP7 306 aa16.87■□□□□ 0.29
SCARB1-206ENST00000539320 YIPF6Q96EC8 236 aa16.87■□□□□ 0.29
SCARB1-206ENST00000539320 TM2D3Q9BRN9 247 aa16.87■□□□□ 0.29
SCARB1-206ENST00000539320 AIFM2Q9BRQ8 373 aa16.87■□□□□ 0.29
SCARB1-206ENST00000539320 THAP7Q9BT49 309 aaPredicted RBP16.87■□□□□ 0.29
SCARB1-206ENST00000539320 FBXL7Q9UJT9 491 aa16.87■□□□□ 0.29
SCARB1-206ENST00000539320 SULT1C2O00338 296 aa16.86■□□□□ 0.29
SCARB1-206ENST00000539320 AREGP15514 252 aa16.86■□□□□ 0.29
SCARB1-206ENST00000539320 ZNF818PQ6ZRF7 136 aa16.86■□□□□ 0.29
SCARB1-206ENST00000539320 MUC7Q8TAX7 377 aa16.86■□□□□ 0.29
SCARB1-206ENST00000539320 S100A16Q96FQ6 103 aaKnown RBP16.86■□□□□ 0.29
SCARB1-206ENST00000539320 HRASLSQ9HDD0 168 aa16.86■□□□□ 0.29
SCARB1-206ENST00000539320 EHFQ9NZC4 300 aa16.86■□□□□ 0.29
SCARB1-206ENST00000539320 A0A087WXM4 84 aa16.85■□□□□ 0.29
SCARB1-206ENST00000539320 PPP5D1E7EU14 171 aa16.85■□□□□ 0.29
SCARB1-206ENST00000539320 DHFRP00374 187 aa16.85■□□□□ 0.29
SCARB1-206ENST00000539320 CRYGCP07315 174 aa16.85■□□□□ 0.29
SCARB1-206ENST00000539320 MYOD1P15172 320 aa16.85■□□□□ 0.29
SCARB1-206ENST00000539320 PSMB6P28072 239 aa16.85■□□□□ 0.29
SCARB1-206ENST00000539320 TAS2R31P59538 309 aa16.85■□□□□ 0.29
SCARB1-206ENST00000539320 LSM3P62310 102 aaKnown RBP16.85■□□□□ 0.29
SCARB1-206ENST00000539320 TMEM69Q5SWH9 247 aa16.85■□□□□ 0.29
SCARB1-206ENST00000539320 AADACL3Q5VUY0 350 aa16.85■□□□□ 0.29
SCARB1-206ENST00000539320 SAMD12Q8N8I0 201 aa16.85■□□□□ 0.29
SCARB1-206ENST00000539320 OR51H1Q8NH63 302 aa16.85■□□□□ 0.29
SCARB1-206ENST00000539320 KCTD12Q96CX2 325 aaKnown RBP16.85■□□□□ 0.29
SCARB1-206ENST00000539320 FANCD2OSQ96PS1 177 aa16.85■□□□□ 0.29
SCARB1-206ENST00000539320 ANAPC10Q9UM13 185 aa16.85■□□□□ 0.29
SCARB1-206ENST00000539320 IZUMO1RA6ND01 250 aa16.84■□□□□ 0.29
SCARB1-206ENST00000539320 GGCTO75223 188 aaKnown RBP16.84■□□□□ 0.29
SCARB1-206ENST00000539320 HPRT1P00492 218 aa16.84■□□□□ 0.29
SCARB1-206ENST00000539320 NQO2P16083 231 aa16.84■□□□□ 0.29
SCARB1-206ENST00000539320 CTRB1P17538 263 aa16.84■□□□□ 0.29
SCARB1-206ENST00000539320 RPS19P39019 145 aaKnown RBP16.84■□□□□ 0.29
SCARB1-206ENST00000539320 MECP2P51608 486 aaKnown RBP16.84■□□□□ 0.29
SCARB1-206ENST00000539320 TAS2R20P59543 309 aa16.84■□□□□ 0.29
SCARB1-206ENST00000539320 POU2AF1Q16633 256 aa16.84■□□□□ 0.29
SCARB1-206ENST00000539320 CTRB2Q6GPI1 263 aa16.84■□□□□ 0.29
SCARB1-206ENST00000539320 TSPAN14Q8NG11 270 aa16.84■□□□□ 0.29
SCARB1-206ENST00000539320 DYNLRB2Q8TF09 96 aa16.84■□□□□ 0.29
SCARB1-206ENST00000539320 BORCS5Q969J3 196 aa16.84■□□□□ 0.29
SCARB1-206ENST00000539320 DYNC2H1Q8NCM8 4307 aaKnown RBP16.83■□□□□ 0.29
SCARB1-206ENST00000539320 NDUFB8O95169 186 aa16.83■□□□□ 0.28
SCARB1-206ENST00000539320 TNFAIP8O95379 198 aa16.83■□□□□ 0.28
SCARB1-206ENST00000539320 HIST1H1BP16401 226 aaKnown RBP16.83■□□□□ 0.28
SCARB1-206ENST00000539320 ADAMTSL5Q6ZMM2 481 aa16.83■□□□□ 0.28
SCARB1-206ENST00000539320 CCDC140Q96MF4 163 aa16.83■□□□□ 0.28
SCARB1-206ENST00000539320 COMMD9Q9P000 198 aa16.83■□□□□ 0.28
SCARB1-206ENST00000539320 DMRT1Q9Y5R6 373 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms