RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 POU2AF1Q16633 256 aa8.88□□□□□ -0.99
RTN3-209ENST00000538995 C10orf55Q5SWW7 151 aa8.88□□□□□ -0.99
RTN3-209ENST00000538995 DHRS11Q6UWP2 260 aa8.88□□□□□ -0.99
RTN3-209ENST00000538995 TMEM17Q86X19 198 aa8.88□□□□□ -0.99
RTN3-209ENST00000538995 ANKRD13BQ86YJ7 626 aa8.88□□□□□ -0.99
RTN3-209ENST00000538995 VKORC1L1Q8N0U8 176 aa8.88□□□□□ -0.99
RTN3-209ENST00000538995 SPAG16Q8N0X2 631 aa8.88□□□□□ -0.99
RTN3-209ENST00000538995 OR5H2Q8NGV7 314 aa8.88□□□□□ -0.99
RTN3-209ENST00000538995 AP3S1Q92572 193 aa8.88□□□□□ -0.99
RTN3-209ENST00000538995 MOB3AQ96BX8 217 aa8.88□□□□□ -0.99
RTN3-209ENST00000538995 OR4C12Q96R67 309 aa8.88□□□□□ -0.99
RTN3-209ENST00000538995 BET1LQ9NYM9 111 aa8.88□□□□□ -0.99
RTN3-209ENST00000538995 PEF1Q9UBV8 284 aaKnown RBP8.88□□□□□ -0.99
RTN3-209ENST00000538995 ADAM30Q9UKF2 790 aa8.88□□□□□ -0.99
RTN3-209ENST00000538995 ZNF257Q9Y2Q1 563 aa8.88□□□□□ -0.99
RTN3-209ENST00000538995 TEX22C9J3V5 150 aa8.87□□□□□ -0.99
RTN3-209ENST00000538995 HPRT1P00492 218 aa8.87□□□□□ -0.99
RTN3-209ENST00000538995 EIF4EP06730 217 aaKnown RBP8.87□□□□□ -0.99
RTN3-209ENST00000538995 FCER2P06734 321 aa8.87□□□□□ -0.99
RTN3-209ENST00000538995 ZNF735P0CB33 412 aa8.87□□□□□ -0.99
RTN3-209ENST00000538995 NHLRC4P0CG21 123 aaPredicted RBP8.87□□□□□ -0.99
RTN3-209ENST00000538995 APELAP0DMC3 54 aa8.87□□□□□ -0.99
RTN3-209ENST00000538995 NQO2P16083 231 aa8.87□□□□□ -0.99
RTN3-209ENST00000538995 RPL27AP46776 148 aaKnown RBP8.87□□□□□ -0.99
RTN3-209ENST00000538995 RORCP51449 518 aa8.87□□□□□ -0.99
RTN3-209ENST00000538995 RPL8P62917 257 aaKnown RBP8.87□□□□□ -0.99
RTN3-209ENST00000538995 RHOGP84095 191 aa8.87□□□□□ -0.99
RTN3-209ENST00000538995 KLF5Q13887 457 aaPredicted RBP8.87□□□□□ -0.99
RTN3-209ENST00000538995 VAX1Q5SQQ9 334 aa8.87□□□□□ -0.99
RTN3-209ENST00000538995 ZNF818PQ6ZRF7 136 aa8.87□□□□□ -0.99
RTN3-209ENST00000538995 NECAP1Q8NC96 275 aa8.87□□□□□ -0.99
RTN3-209ENST00000538995 GPX8Q8TED1 209 aa8.87□□□□□ -0.99
RTN3-209ENST00000538995 PLEKHA2Q9HB19 425 aa8.87□□□□□ -0.99
RTN3-209ENST00000538995 SLC2A9Q9NRM0 540 aa8.87□□□□□ -0.99
RTN3-209ENST00000538995 COMMD9Q9P000 198 aa8.87□□□□□ -0.99
RTN3-209ENST00000538995 COMMD3Q9UBI1 195 aa8.87□□□□□ -0.99
RTN3-209ENST00000538995 ANKRD34BA5PLL1 514 aa8.86□□□□□ -0.99
RTN3-209ENST00000538995 SULT1C2O00338 296 aa8.86□□□□□ -0.99
RTN3-209ENST00000538995 LY86O95711 162 aa8.86□□□□□ -0.99
RTN3-209ENST00000538995 DHFRP00374 187 aa8.86□□□□□ -0.99
RTN3-209ENST00000538995 HLA-GP17693 338 aa8.86□□□□□ -0.99
RTN3-209ENST00000538995 GNRHRP30968 328 aa8.86□□□□□ -0.99
RTN3-209ENST00000538995 RCVRNP35243 200 aa8.86□□□□□ -0.99
RTN3-209ENST00000538995 RFX2P48378 723 aa8.86□□□□□ -0.99
RTN3-209ENST00000538995 ZNF45Q02386 682 aa8.86□□□□□ -0.99
RTN3-209ENST00000538995 ATP5G2Q06055 141 aa8.86□□□□□ -0.99
RTN3-209ENST00000538995 EXOSC2Q13868 293 aaKnown RBP8.86□□□□□ -0.99
RTN3-209ENST00000538995 CTF1Q16619 201 aa8.86□□□□□ -0.99
RTN3-209ENST00000538995 KLK9Q2XQG4 91 aa8.86□□□□□ -0.99
RTN3-209ENST00000538995 AADACL3Q5VUY0 350 aa8.86□□□□□ -0.99
RTN3-209ENST00000538995 OR4A47Q6IF82 309 aa8.86□□□□□ -0.99
RTN3-209ENST00000538995 MZT2AQ6P582 158 aa8.86□□□□□ -0.99
RTN3-209ENST00000538995 CMTM1Q8IZ96 169 aa8.86□□□□□ -0.99
RTN3-209ENST00000538995 GPHA2Q96T91 129 aa8.86□□□□□ -0.99
RTN3-209ENST00000538995 SRSF8Q9BRL6 282 aaKnown RBP8.86□□□□□ -0.99
RTN3-209ENST00000538995 ZNF2Q9BSG1 426 aaPredicted RBP8.86□□□□□ -0.99
RTN3-209ENST00000538995 MRPS26Q9BYN8 205 aaKnown RBP8.86□□□□□ -0.99
RTN3-209ENST00000538995 AKIP1Q9NQ31 210 aa8.86□□□□□ -0.99
RTN3-209ENST00000538995 KLK9Q9UKQ9 250 aa8.86□□□□□ -0.99
RTN3-209ENST00000538995 SMAD5-AS1Q9Y6J3 95 aa8.86□□□□□ -0.99
RTN3-209ENST00000538995 KMT2CQ8NEZ4 4911 aaKnown RBP8.85□□□□□ -0.99
RTN3-209ENST00000538995 DPPA5A6NC42 116 aa8.85□□□□□ -0.99
RTN3-209ENST00000538995 RBMXL2O75526 392 aaKnown RBP8.85□□□□□ -0.99
RTN3-209ENST00000538995 TPPPO94811 219 aa8.85□□□□□ -0.99
RTN3-209ENST00000538995 IGLV1-51P01701 117 aa8.85□□□□□ -0.99
RTN3-209ENST00000538995 PMP2P02689 132 aa8.85□□□□□ -0.99
RTN3-209ENST00000538995 CRYGCP07315 174 aa8.85□□□□□ -0.99
RTN3-209ENST00000538995 IL6RP08887 468 aaPredicted RBP8.85□□□□□ -0.99
RTN3-209ENST00000538995 GP9P14770 177 aa8.85□□□□□ -0.99
RTN3-209ENST00000538995 SPNP16150 400 aa8.85□□□□□ -0.99
RTN3-209ENST00000538995 ELK1P19419 428 aa8.85□□□□□ -0.99
RTN3-209ENST00000538995 HRH1P35367 487 aa8.85□□□□□ -0.99
RTN3-209ENST00000538995 DEFA5Q01523 94 aa8.85□□□□□ -0.99
RTN3-209ENST00000538995 TATDN3Q17R31 274 aa8.85□□□□□ -0.99
RTN3-209ENST00000538995 RPEL1Q2QD12 228 aa8.85□□□□□ -0.99
RTN3-209ENST00000538995 SSX9Q7RTT3 188 aa8.85□□□□□ -0.99
RTN3-209ENST00000538995 CADM3Q8N126 398 aa8.85□□□□□ -0.99
RTN3-209ENST00000538995 OR9G4Q8NGQ1 327 aa8.85□□□□□ -0.99
RTN3-209ENST00000538995 OR6F1Q8NGZ6 308 aa8.85□□□□□ -0.99
RTN3-209ENST00000538995 OR51H1Q8NH63 302 aa8.85□□□□□ -0.99
RTN3-209ENST00000538995 HRASLSQ9HDD0 168 aa8.85□□□□□ -0.99
RTN3-209ENST00000538995 SIGLEC8Q9NYZ4 499 aa8.85□□□□□ -0.99
RTN3-209ENST00000538995 SORL1Q92673 2214 aa8.85□□□□□ -0.99
RTN3-209ENST00000538995 TENM3Q9P273 2699 aa8.85□□□□□ -0.99
RTN3-209ENST00000538995 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.84□□□□□ -0.99
RTN3-209ENST00000538995 A0A1B0GW64 132 aa8.84□□□□□ -0.99
RTN3-209ENST00000538995 HMX3A6NHT5 357 aa8.84□□□□□ -0.99
RTN3-209ENST00000538995 GPR31O00270 319 aa8.84□□□□□ -0.99
RTN3-209ENST00000538995 HPGDSO60760 199 aa8.84□□□□□ -0.99
RTN3-209ENST00000538995 PGLYRP1O75594 196 aaPredicted RBP8.84□□□□□ -0.99
RTN3-209ENST00000538995 S1PR2O95136 353 aa8.84□□□□□ -0.99
RTN3-209ENST00000538995 TRBV12-3P01733 135 aa8.84□□□□□ -0.99
RTN3-209ENST00000538995 PRH1P02810 166 aa8.84□□□□□ -0.99
RTN3-209ENST00000538995 HIST1H1BP16401 226 aaKnown RBP8.84□□□□□ -0.99
RTN3-209ENST00000538995 ZNF182P17025 639 aaPredicted RBP8.84□□□□□ -0.99
RTN3-209ENST00000538995 F2RP25116 425 aa8.84□□□□□ -0.99
RTN3-209ENST00000538995 PSMB6P28072 239 aa8.84□□□□□ -0.99
RTN3-209ENST00000538995 S100GP29377 79 aa8.84□□□□□ -0.99
RTN3-209ENST00000538995 SYNJ2BPP57105 145 aa8.84□□□□□ -0.99
RTN3-209ENST00000538995 ERVK-16P61578 105 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms