RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 GLYATQ6IB77 296 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 HAGHLQ6PII5 290 aaPredicted RBP1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 ARL9Q6T311 187 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 PAQR6Q6TCH4 344 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 PAMR1Q6UXH9 720 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 TFAP2EQ6VUC0 442 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 ZNF620Q6ZNG0 422 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 PQLC2Q6ZP29 291 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 MBOAT2Q6ZWT7 520 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 FA2HQ7L5A8 372 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 HMGN2P46Q86SG4 172 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 MARCH3Q86UD3 253 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 DOLPP1Q86YN1 238 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 APRG1Q8IVJ8 170 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 BAP18Q8IXM2 172 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 ABHD12Q8N2K0 398 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 C9orf62Q8N4C0 152 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 BPIFB2Q8N4F0 458 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 C11orf42Q8N5U0 333 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 GCSAMQ8N6F7 178 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 GDPD1Q8N9F7 314 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 WDR31Q8NA23 367 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 THAP8Q8NA92 274 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 OR8D4Q8NGM9 314 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 OR1J4Q8NGS1 313 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 OR52P1PQ8NH57 321 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 OR4S2Q8NH73 311 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 MFSD8Q8NHS3 518 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 ZNF519Q8TB69 540 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 Q8WTZ3 238 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 SMAP2Q8WU79 429 aaPredicted RBP1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 GATAD1Q8WUU5 269 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 CANT1Q8WVQ1 401 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 ZNRF4Q8WWF5 429 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 TRUB1Q8WWH5 349 aaKnown RBP1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 CYGBQ8WWM9 190 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 MBD3L1Q8WWY6 194 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 GEMIN6Q8WXD5 167 aaKnown RBP1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 RGP1Q92546 391 aaPredicted RBP1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 DCUN1D4Q92564 292 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 RBPMSQ93062 196 aaKnown RBP1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 POP5Q969H6 163 aaKnown RBP1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 IL22RA2Q969J5 263 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 ARL11Q969Q4 196 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 CMBLQ96DG6 245 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 STARD4Q96DR4 205 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 PIK3IP1Q96FE7 263 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 GRAMD2BQ96HH9 432 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 CYYR1Q96J86 154 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 OR10C1Q96KK4 312 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 SGK494Q96LW2 274 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 ZNF488Q96MN9 340 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 SCGB3A2Q96PL1 93 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 TP53RKQ96S44 253 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 KCTD14Q9BQ13 255 aaPredicted RBP1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 GINS3Q9BRX5 216 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 PBDC1Q9BVG4 233 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 SMIM3Q9BZL3 60 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 MAP1LC3BQ9GZQ8 125 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 GABARAPL1Q9H0R8 117 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 OR51J1Q9H342 316 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 TXNIPQ9H3M7 391 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 FNDC4Q9H6D8 234 aaPredicted RBP1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 MAGIXQ9H6Y5 334 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 NIPAL2Q9H841 368 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 SEBOXQ9HB31 216 aaPredicted RBP1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 FGF20Q9NP95 211 aaPredicted RBP1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 TAS2R5Q9NYW4 299 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 CISD1Q9NZ45 108 aaKnown RBP1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 HSPB8Q9UJY1 196 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 JPT1Q9UK76 154 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 BOKQ9UMX3 212 aaPredicted RBP1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 PSG8Q9UQ74 426 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 SIGLEC7Q9Y286 467 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 TRAPPC4Q9Y296 219 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 RCL1Q9Y2P8 373 aaKnown RBP1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 AK6Q9Y3D8 172 aaKnown RBP1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 HDGFL3Q9Y3E1 203 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 FBXO7Q9Y3I1 522 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 FLVCR1Q9Y5Y0 555 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 ENPP4Q9Y6X5 453 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 CR1P17927 2039 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 SONP18583 2426 aaKnown RBP1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 ABCA1O95477 2261 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 DOCK11Q5JSL3 2073 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 NIPBLQ6KC79 2804 aaeCLIP1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 FN1P02751 2386 aaKnown RBP1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 TRAV36DV7A0A075B6V5 113 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 MEIKINA0A087WXM9 373 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 TMED7-TICAM2A0A0A6YYA0 188 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 TRBV9A0A0B4J1U6 114 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 TRAV24A0A0B4J272 114 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 TRBV4-1A0A0J9YWV2 114 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 A0A0X1KG70 313 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 A0A1W2PPE3 182 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 DHRS12A0PJE2 317 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 TMEM218A2RU14 115 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 TRAPPC13A5PLN9 417 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 FAM231BA6NCW3 169 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 MPTX1A8MV57 137 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms