RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 NBPF19A0A087WUL8 3843 aa12.07□□□□□ -0.48
CDCA3-207ENST00000538862 PRDX2P32119 198 aa12.07□□□□□ -0.48
CDCA3-207ENST00000538862 TFF3Q07654 80 aa12.07□□□□□ -0.48
CDCA3-207ENST00000538862 FOXF2Q12947 444 aa12.07□□□□□ -0.48
CDCA3-207ENST00000538862 ADIRFQ15847 76 aa12.07□□□□□ -0.48
CDCA3-207ENST00000538862 PYY3Q5JQD4 70 aa12.07□□□□□ -0.48
CDCA3-207ENST00000538862 FAM90A1Q86YD7 464 aa12.07□□□□□ -0.48
CDCA3-207ENST00000538862 LRRC29Q8WV35 223 aa12.07□□□□□ -0.48
CDCA3-207ENST00000538862 RAB24Q969Q5 203 aa12.07□□□□□ -0.48
CDCA3-207ENST00000538862 R3HDM4Q96D70 268 aa12.07□□□□□ -0.48
CDCA3-207ENST00000538862 DIRC2Q96SL1 478 aa12.07□□□□□ -0.48
CDCA3-207ENST00000538862 SSX3Q99909 188 aa12.07□□□□□ -0.48
CDCA3-207ENST00000538862 SH3BGRL2Q9UJC5 107 aa12.07□□□□□ -0.48
CDCA3-207ENST00000538862 IGHV3-43A0A0B4J1X8 118 aa12.06□□□□□ -0.48
CDCA3-207ENST00000538862 HPRT1P00492 218 aa12.06□□□□□ -0.48
CDCA3-207ENST00000538862 TFF1P04155 84 aa12.06□□□□□ -0.48
CDCA3-207ENST00000538862 PFN1P07737 140 aaKnown RBP12.06□□□□□ -0.48
CDCA3-207ENST00000538862 IGHV3-43DP0DP04 118 aa12.06□□□□□ -0.48
CDCA3-207ENST00000538862 DUTP33316 252 aaKnown RBP12.06□□□□□ -0.48
CDCA3-207ENST00000538862 RPL23P62829 140 aaKnown RBP12.06□□□□□ -0.48
CDCA3-207ENST00000538862 HOXA4Q00056 320 aaPredicted RBP12.06□□□□□ -0.48
CDCA3-207ENST00000538862 CR1LQ2VPA4 569 aa12.06□□□□□ -0.48
CDCA3-207ENST00000538862 TMEM249Q2WGJ8 235 aa12.06□□□□□ -0.48
CDCA3-207ENST00000538862 ACOT6Q3I5F7 207 aaPredicted RBP12.06□□□□□ -0.48
CDCA3-207ENST00000538862 TPRX1Q8N7U7 411 aa12.06□□□□□ -0.48
CDCA3-207ENST00000538862 OR10A7Q8NGE5 316 aa12.06□□□□□ -0.48
CDCA3-207ENST00000538862 RFESDQ8TAC1 157 aa12.06□□□□□ -0.48
CDCA3-207ENST00000538862 GPR61Q9BZJ8 451 aa12.06□□□□□ -0.48
CDCA3-207ENST00000538862 SRD5A3Q9H8P0 318 aa12.06□□□□□ -0.48
CDCA3-207ENST00000538862 JPT1Q9UK76 154 aa12.06□□□□□ -0.48
CDCA3-207ENST00000538862 TRBV23-1A0A0A0MS06 115 aa12.05□□□□□ -0.48
CDCA3-207ENST00000538862 IGHV1-18A0A0C4DH31 117 aa12.05□□□□□ -0.48
CDCA3-207ENST00000538862 SMCO3A2RU48 225 aa12.05□□□□□ -0.48
CDCA3-207ENST00000538862 C15orf62A8K5M9 175 aa12.05□□□□□ -0.48
CDCA3-207ENST00000538862 DEFB108AA8MXU0 73 aa12.05□□□□□ -0.48
CDCA3-207ENST00000538862 AHRRA9YTQ3 701 aa12.05□□□□□ -0.48
CDCA3-207ENST00000538862 SOD3P08294 240 aa12.05□□□□□ -0.48
CDCA3-207ENST00000538862 CFHR2P36980 270 aa12.05□□□□□ -0.48
CDCA3-207ENST00000538862 GPR12P47775 334 aa12.05□□□□□ -0.48
CDCA3-207ENST00000538862 RPP30P78346 268 aaKnown RBP12.05□□□□□ -0.48
CDCA3-207ENST00000538862 HNF4GQ14541 408 aa12.05□□□□□ -0.48
CDCA3-207ENST00000538862 P2RY6Q15077 328 aa12.05□□□□□ -0.48
CDCA3-207ENST00000538862 DNLZQ5SXM8 178 aa12.05□□□□□ -0.48
CDCA3-207ENST00000538862 C16orf82Q7Z2V1 217 aa12.05□□□□□ -0.48
CDCA3-207ENST00000538862 OR4F5Q8NH21 305 aa12.05□□□□□ -0.48
CDCA3-207ENST00000538862 PPP1R35Q8TAP8 253 aa12.05□□□□□ -0.48
CDCA3-207ENST00000538862 OR4F4Q96R69 305 aa12.05□□□□□ -0.48
CDCA3-207ENST00000538862 PARLQ9H300 379 aa12.05□□□□□ -0.48
CDCA3-207ENST00000538862 FZR1Q9UM11 496 aa12.05□□□□□ -0.48
CDCA3-207ENST00000538862 A0A1B0GV90 55 aa12.05□□□□□ -0.48
CDCA3-207ENST00000538862 SRRM5B3KS81 715 aa12.05□□□□□ -0.48
CDCA3-207ENST00000538862 HMGB3O15347 200 aaKnown RBP12.05□□□□□ -0.48
CDCA3-207ENST00000538862 YPEL1O60688 119 aa12.05□□□□□ -0.48
CDCA3-207ENST00000538862 VENTXO95231 258 aa12.05□□□□□ -0.48
CDCA3-207ENST00000538862 MORN2Q502X0 79 aa12.05□□□□□ -0.48
CDCA3-207ENST00000538862 TGIF2LYQ8IUE0 185 aa12.05□□□□□ -0.48
CDCA3-207ENST00000538862 OR52E5Q8NH55 327 aa12.05□□□□□ -0.48
CDCA3-207ENST00000538862 RAB1CQ92928 201 aa12.05□□□□□ -0.48
CDCA3-207ENST00000538862 RPUSD4Q96CM3 377 aaKnown RBP12.05□□□□□ -0.48
CDCA3-207ENST00000538862 ANAPC16Q96DE5 110 aa12.05□□□□□ -0.48
CDCA3-207ENST00000538862 YPEL2Q96QA6 119 aa12.05□□□□□ -0.48
CDCA3-207ENST00000538862 PFDN5Q99471 154 aa12.05□□□□□ -0.48
CDCA3-207ENST00000538862 QTRT1Q9BXR0 403 aaKnown RBP12.05□□□□□ -0.48
CDCA3-207ENST00000538862 OR6C3Q9NZP0 311 aa12.05□□□□□ -0.48
CDCA3-207ENST00000538862 WDR83OSQ9Y284 106 aa12.05□□□□□ -0.48
CDCA3-207ENST00000538862 MGST3O14880 152 aa12.04□□□□□ -0.48
CDCA3-207ENST00000538862 RBFOX2O43251 390 aaKnown RBP eCLIP12.04□□□□□ -0.48
CDCA3-207ENST00000538862 MPDU1O75352 247 aa12.04□□□□□ -0.48
CDCA3-207ENST00000538862 PROP1O75360 226 aa12.04□□□□□ -0.48
CDCA3-207ENST00000538862 CD1BP29016 333 aa12.04□□□□□ -0.48
CDCA3-207ENST00000538862 CDC34P49427 236 aaPredicted RBP12.04□□□□□ -0.48
CDCA3-207ENST00000538862 LINC00205P59089 165 aa12.04□□□□□ -0.48
CDCA3-207ENST00000538862 PDLIM3Q53GG5 364 aaPredicted RBP12.04□□□□□ -0.48
CDCA3-207ENST00000538862 OR10D4PQ8NGN7 298 aa12.04□□□□□ -0.48
CDCA3-207ENST00000538862 NEIL1Q96FI4 390 aaPredicted RBP12.04□□□□□ -0.48
CDCA3-207ENST00000538862 SNX22Q96L94 193 aa12.04□□□□□ -0.48
CDCA3-207ENST00000538862 OR5B12Q96R08 314 aa12.04□□□□□ -0.48
CDCA3-207ENST00000538862 PITPNC1Q9UKF7 332 aa12.04□□□□□ -0.48
CDCA3-207ENST00000538862 PROCRQ9UNN8 238 aa12.04□□□□□ -0.48
CDCA3-207ENST00000538862 TRGV8A0A0C4DH27 118 aa12.03□□□□□ -0.48
CDCA3-207ENST00000538862 A1L4Q6 167 aa12.03□□□□□ -0.48
CDCA3-207ENST00000538862 H7BYZ3 331 aa12.03□□□□□ -0.48
CDCA3-207ENST00000538862 CGAP01215 116 aa12.03□□□□□ -0.48
CDCA3-207ENST00000538862 OR9G9P0C7N8 305 aa12.03□□□□□ -0.48
CDCA3-207ENST00000538862 GFI1BQ5VTD9 330 aa12.03□□□□□ -0.48
CDCA3-207ENST00000538862 BHLHA15Q7RTS1 189 aaPredicted RBP12.03□□□□□ -0.48
CDCA3-207ENST00000538862 Q8N7P7 452 aa12.03□□□□□ -0.48
CDCA3-207ENST00000538862 OR51G1Q8NGK1 321 aa12.03□□□□□ -0.48
CDCA3-207ENST00000538862 DCTN5Q9BTE1 182 aa12.03□□□□□ -0.48
CDCA3-207ENST00000538862 IGKV1D-17A0A075B6S4 117 aa12.03□□□□□ -0.48
CDCA3-207ENST00000538862 PAGE4O60829 102 aa12.03□□□□□ -0.48
CDCA3-207ENST00000538862 TNFSF13O75888 250 aa12.03□□□□□ -0.48
CDCA3-207ENST00000538862 TMEM11P17152 192 aa12.03□□□□□ -0.48
CDCA3-207ENST00000538862 GALR1P47211 349 aa12.03□□□□□ -0.48
CDCA3-207ENST00000538862 EDDM3AQ14507 147 aa12.03□□□□□ -0.48
CDCA3-207ENST00000538862 C4orf17Q53FE4 359 aa12.03□□□□□ -0.48
CDCA3-207ENST00000538862 SPINK9Q5DT21 86 aa12.03□□□□□ -0.48
CDCA3-207ENST00000538862 HIST2H2BCQ6DN03 193 aa12.03□□□□□ -0.48
CDCA3-207ENST00000538862 OR2Z1Q8NG97 314 aa12.03□□□□□ -0.48
CDCA3-207ENST00000538862 OR4A16Q8NH70 328 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms