RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 HSPE1P61604 102 aaKnown RBP12.07□□□□□ -0.48
ATL3-203ENST00000538786 SPSB3Q6PJ21 355 aa12.07□□□□□ -0.48
ATL3-203ENST00000538786 ATRAIDQ6UW56 229 aa12.07□□□□□ -0.48
ATL3-203ENST00000538786 CENPVQ7Z7K6 275 aaPredicted RBP12.07□□□□□ -0.48
ATL3-203ENST00000538786 OR8B3Q8NGG8 313 aa12.07□□□□□ -0.48
ATL3-203ENST00000538786 ST6GALNAC6Q969X2 333 aa12.07□□□□□ -0.48
ATL3-203ENST00000538786 OR8B2Q96RD0 313 aa12.07□□□□□ -0.48
ATL3-203ENST00000538786 HCFC1P51610 2035 aa12.06□□□□□ -0.48
ATL3-203ENST00000538786 C9JQL5 133 aa12.06□□□□□ -0.48
ATL3-203ENST00000538786 LY6HO94772 140 aa12.06□□□□□ -0.48
ATL3-203ENST00000538786 IFNA10P01566 189 aa12.06□□□□□ -0.48
ATL3-203ENST00000538786 RBP4P02753 201 aa12.06□□□□□ -0.48
ATL3-203ENST00000538786 HOXA1P49639 335 aaPredicted RBP12.06□□□□□ -0.48
ATL3-203ENST00000538786 SP5Q6BEB4 398 aaPredicted RBP12.06□□□□□ -0.48
ATL3-203ENST00000538786 C8orf46Q8TAG6 207 aa12.06□□□□□ -0.48
ATL3-203ENST00000538786 SUN5Q8TC36 379 aa12.06□□□□□ -0.48
ATL3-203ENST00000538786 TNFRSF14Q92956 283 aa12.06□□□□□ -0.48
ATL3-203ENST00000538786 NEIL1Q96FI4 390 aaPredicted RBP12.06□□□□□ -0.48
ATL3-203ENST00000538786 EIF5A2Q9GZV4 153 aaKnown RBP12.06□□□□□ -0.48
ATL3-203ENST00000538786 ZNF257Q9Y2Q1 563 aa12.06□□□□□ -0.48
ATL3-203ENST00000538786 KALRNO60229 2985 aa12.06□□□□□ -0.48
ATL3-203ENST00000538786 USP24Q9UPU5 2620 aa12.06□□□□□ -0.48
ATL3-203ENST00000538786 SRRM4A7MD48 611 aaKnown RBP12.05□□□□□ -0.48
ATL3-203ENST00000538786 H7C2Y5 167 aa12.05□□□□□ -0.48
ATL3-203ENST00000538786 UPK2O00526 184 aa12.05□□□□□ -0.48
ATL3-203ENST00000538786 IL3RAP26951 378 aa12.05□□□□□ -0.48
ATL3-203ENST00000538786 RPS16P62249 146 aaKnown RBP12.05□□□□□ -0.48
ATL3-203ENST00000538786 BTN1A1Q13410 526 aa12.05□□□□□ -0.48
ATL3-203ENST00000538786 TMEM177Q53S58 311 aa12.05□□□□□ -0.48
ATL3-203ENST00000538786 NABP2Q9BQ15 211 aa12.05□□□□□ -0.48
ATL3-203ENST00000538786 PCGF1Q9BSM1 259 aa12.05□□□□□ -0.48
ATL3-203ENST00000538786 RPRMQ9NS64 109 aa12.05□□□□□ -0.48
ATL3-203ENST00000538786 BET1LQ9NYM9 111 aa12.05□□□□□ -0.48
ATL3-203ENST00000538786 COL6A6A6NMZ7 2263 aa12.05□□□□□ -0.48
ATL3-203ENST00000538786 TRAV1-1A0A0B4J248 108 aa12.05□□□□□ -0.48
ATL3-203ENST00000538786 A0A1B0GV50 99 aa12.05□□□□□ -0.48
ATL3-203ENST00000538786 A0A1W2PPR1 153 aa12.05□□□□□ -0.48
ATL3-203ENST00000538786 HBE1P02100 147 aa12.05□□□□□ -0.48
ATL3-203ENST00000538786 MDKP21741 143 aaPredicted RBP12.05□□□□□ -0.48
ATL3-203ENST00000538786 REG1BP48304 166 aa12.05□□□□□ -0.48
ATL3-203ENST00000538786 RAB2AP61019 212 aa12.05□□□□□ -0.48
ATL3-203ENST00000538786 CCL20P78556 96 aa12.05□□□□□ -0.48
ATL3-203ENST00000538786 GUCA2BQ16661 112 aa12.05□□□□□ -0.48
ATL3-203ENST00000538786 WDR25Q64LD2 544 aaPredicted RBP12.05□□□□□ -0.48
ATL3-203ENST00000538786 SFT2D1Q8WV19 159 aa12.05□□□□□ -0.48
ATL3-203ENST00000538786 LHX4Q969G2 390 aa12.05□□□□□ -0.48
ATL3-203ENST00000538786 RBMXL1Q96E39 390 aaKnown RBP12.05□□□□□ -0.48
ATL3-203ENST00000538786 GGACTQ9BVM4 153 aa12.05□□□□□ -0.48
ATL3-203ENST00000538786 NKX6-2Q9C056 277 aaPredicted RBP12.05□□□□□ -0.48
ATL3-203ENST00000538786 CHODLQ9H9P2 273 aa12.05□□□□□ -0.48
ATL3-203ENST00000538786 KIAA1456Q9P272 454 aa12.05□□□□□ -0.48
ATL3-203ENST00000538786 OR51B2Q9Y5P1 312 aa12.05□□□□□ -0.48
ATL3-203ENST00000538786 NBASA2RRP1 2371 aa12.04□□□□□ -0.48
ATL3-203ENST00000538786 PPIAL4CA0A0B4J2A2 164 aa12.04□□□□□ -0.48
ATL3-203ENST00000538786 RRHO14718 337 aa12.04□□□□□ -0.48
ATL3-203ENST00000538786 SAA1P0DJI8 122 aaPredicted RBP12.04□□□□□ -0.48
ATL3-203ENST00000538786 PPIAL4GP0DN37 164 aa12.04□□□□□ -0.48
ATL3-203ENST00000538786 FGF7P21781 194 aa12.04□□□□□ -0.48
ATL3-203ENST00000538786 DIAPH2-AS1Q14236 149 aa12.04□□□□□ -0.48
ATL3-203ENST00000538786 TMEM41BQ5BJD5 291 aa12.04□□□□□ -0.48
ATL3-203ENST00000538786 PDPNQ86YL7 162 aa12.04□□□□□ -0.48
ATL3-203ENST00000538786 TGIF2LXQ8IUE1 241 aa12.04□□□□□ -0.48
ATL3-203ENST00000538786 OR4C13Q8NGP0 309 aa12.04□□□□□ -0.48
ATL3-203ENST00000538786 FLYWCH2Q96CP2 140 aaKnown RBP12.04□□□□□ -0.48
ATL3-203ENST00000538786 SMDT1Q9H4I9 107 aa12.04□□□□□ -0.48
ATL3-203ENST00000538786 ENY2Q9NPA8 101 aa12.04□□□□□ -0.48
ATL3-203ENST00000538786 FKBP11Q9NYL4 201 aa12.04□□□□□ -0.48
ATL3-203ENST00000538786 IGHV2-26A0A0B4J1V2 119 aa12.03□□□□□ -0.48
ATL3-203ENST00000538786 KBTBD11O94819 623 aa12.03□□□□□ -0.48
ATL3-203ENST00000538786 PRRX1P54821 245 aa12.03□□□□□ -0.48
ATL3-203ENST00000538786 ETV3LQ6ZN32 361 aa12.03□□□□□ -0.48
ATL3-203ENST00000538786 LY6G5BQ8NDX9 201 aa12.03□□□□□ -0.48
ATL3-203ENST00000538786 HARBI1Q96MB7 349 aa12.03□□□□□ -0.48
ATL3-203ENST00000538786 VSIRQ9H7M9 311 aa12.03□□□□□ -0.48
ATL3-203ENST00000538786 TMA7Q9Y2S6 64 aaKnown RBP12.03□□□□□ -0.48
ATL3-203ENST00000538786 WASHC3Q9Y3C0 194 aa12.03□□□□□ -0.48
ATL3-203ENST00000538786 DIDO1Q9BTC0 2240 aaKnown RBP12.03□□□□□ -0.48
ATL3-203ENST00000538786 hCG_1809904A0A1W2PP81 198 aa12.03□□□□□ -0.48
ATL3-203ENST00000538786 A0A1W2PPE2 198 aa12.03□□□□□ -0.48
ATL3-203ENST00000538786 A0A1W2PR64 198 aa12.03□□□□□ -0.48
ATL3-203ENST00000538786 A0A1W2PRV1 198 aa12.03□□□□□ -0.48
ATL3-203ENST00000538786 RBFOX3A6NFN3 312 aa12.03□□□□□ -0.48
ATL3-203ENST00000538786 PRSS46E5RG02 174 aa12.03□□□□□ -0.48
ATL3-203ENST00000538786 C19orf84I3L1E1 186 aa12.03□□□□□ -0.48
ATL3-203ENST00000538786 F12P00748 615 aaPredicted RBP12.03□□□□□ -0.48
ATL3-203ENST00000538786 IGLV1-47P01700 117 aa12.03□□□□□ -0.48
ATL3-203ENST00000538786 CD1BP29016 333 aa12.03□□□□□ -0.48
ATL3-203ENST00000538786 MC5RP33032 325 aa12.03□□□□□ -0.48
ATL3-203ENST00000538786 PPT1P50897 306 aa12.03□□□□□ -0.48
ATL3-203ENST00000538786 RAB13P51153 203 aa12.03□□□□□ -0.48
ATL3-203ENST00000538786 RAB11AP62491 216 aa12.03□□□□□ -0.48
ATL3-203ENST00000538786 PRCDQ00LT1 54 aa12.03□□□□□ -0.48
ATL3-203ENST00000538786 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.03□□□□□ -0.48
ATL3-203ENST00000538786 MBD3L1Q8WWY6 194 aa12.03□□□□□ -0.48
ATL3-203ENST00000538786 CLEC7AQ9BXN2 247 aa12.03□□□□□ -0.48
ATL3-203ENST00000538786 NPCDR1Q9BY65 106 aa12.03□□□□□ -0.48
ATL3-203ENST00000538786 KPTNQ9Y664 436 aa12.03□□□□□ -0.48
ATL3-203ENST00000538786 CACNA1BQ00975 2339 aa12.03□□□□□ -0.48
ATL3-203ENST00000538786 YLPM1P49750 1951 aaKnown RBP12.02□□□□□ -0.48
ATL3-203ENST00000538786 SNAPINO95295 136 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms