RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 CEACAM4O75871 244 aa14.29□□□□□ -0.12
SCARB1-205ENST00000538291 ZNF708P17019 499 aa14.29□□□□□ -0.12
SCARB1-205ENST00000538291 CRYBB3P26998 211 aa14.29□□□□□ -0.12
SCARB1-205ENST00000538291 GOLT1AQ6ZVE7 132 aa14.29□□□□□ -0.12
SCARB1-205ENST00000538291 AMY1AP04745 511 aa14.29□□□□□ -0.12
SCARB1-205ENST00000538291 CLDND2Q8NHS1 167 aa14.29□□□□□ -0.12
SCARB1-205ENST00000538291 TMEM70Q9BUB7 260 aa14.29□□□□□ -0.12
SCARB1-205ENST00000538291 IGHV3OR16-13A0A075B7E8 117 aa14.28□□□□□ -0.12
SCARB1-205ENST00000538291 IGHV3-74A0A0B4J1X5 117 aa14.28□□□□□ -0.12
SCARB1-205ENST00000538291 NPFFO15130 113 aa14.28□□□□□ -0.12
SCARB1-205ENST00000538291 MDKP21741 143 aaPredicted RBP14.28□□□□□ -0.12
SCARB1-205ENST00000538291 SMUG1Q53HV7 270 aa14.28□□□□□ -0.12
SCARB1-205ENST00000538291 CD200R1LQ6Q8B3 271 aa14.28□□□□□ -0.12
SCARB1-205ENST00000538291 FOXI3A8MTJ6 420 aaPredicted RBP14.28□□□□□ -0.12
SCARB1-205ENST00000538291 LEPROTL1O95214 131 aa14.28□□□□□ -0.12
SCARB1-205ENST00000538291 PPP1R17O96001 155 aa14.28□□□□□ -0.12
SCARB1-205ENST00000538291 RPL39P5Q59GN2 51 aa14.28□□□□□ -0.12
SCARB1-205ENST00000538291 MBNL2Q5VZF2 373 aaKnown RBP14.28□□□□□ -0.12
SCARB1-205ENST00000538291 C5orf66Q9H5L9 145 aa14.28□□□□□ -0.12
SCARB1-205ENST00000538291 EFEMP2O95967 443 aa14.28□□□□□ -0.12
SCARB1-205ENST00000538291 MOSP00540 346 aa14.28□□□□□ -0.12
SCARB1-205ENST00000538291 IGHV3-48P01763 117 aa14.28□□□□□ -0.12
SCARB1-205ENST00000538291 ZNF25P17030 456 aaPredicted RBP14.28□□□□□ -0.12
SCARB1-205ENST00000538291 AQP10Q96PS8 301 aa14.28□□□□□ -0.12
SCARB1-205ENST00000538291 MRPS16Q9Y3D3 137 aaKnown RBP14.28□□□□□ -0.12
SCARB1-205ENST00000538291 CSRP1P21291 193 aaKnown RBP14.28□□□□□ -0.12
SCARB1-205ENST00000538291 HSPB9Q9BQS6 159 aa14.28□□□□□ -0.12
SCARB1-205ENST00000538291 COL4A5P29400 1685 aa14.28□□□□□ -0.12
SCARB1-205ENST00000538291 FBXL15Q9H469 300 aa14.28□□□□□ -0.12
SCARB1-205ENST00000538291 NPDC1Q9NQX5 325 aaPredicted RBP14.28□□□□□ -0.12
SCARB1-205ENST00000538291 FBXL7Q9UJT9 491 aa14.28□□□□□ -0.12
SCARB1-205ENST00000538291 TRIOBPQ9H2D6 2365 aa14.27□□□□□ -0.12
SCARB1-205ENST00000538291 IGHV2OR16-5A0A0B4J2B6 119 aa14.27□□□□□ -0.12
SCARB1-205ENST00000538291 IGLV3-19P01714 112 aa14.27□□□□□ -0.12
SCARB1-205ENST00000538291 NEU1Q99519 415 aa14.27□□□□□ -0.12
SCARB1-205ENST00000538291 IGKV1D-33P01593 117 aa14.27□□□□□ -0.12
SCARB1-205ENST00000538291 IGKV1-33P01594 117 aa14.27□□□□□ -0.12
SCARB1-205ENST00000538291 NRN1LQ496H8 165 aa14.27□□□□□ -0.12
SCARB1-205ENST00000538291 ZNF383Q8NA42 475 aa14.27□□□□□ -0.13
SCARB1-205ENST00000538291 TMEM187Q14656 261 aa14.27□□□□□ -0.13
SCARB1-205ENST00000538291 PPP1R27Q86WC6 154 aa14.27□□□□□ -0.13
SCARB1-205ENST00000538291 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.27□□□□□ -0.13
SCARB1-205ENST00000538291 RNASE1P07998 156 aaKnown RBP14.26□□□□□ -0.13
SCARB1-205ENST00000538291 CA7P43166 264 aa14.26□□□□□ -0.13
SCARB1-205ENST00000538291 FAM216BQ8N7L0 139 aa14.26□□□□□ -0.13
SCARB1-205ENST00000538291 RNASE6Q93091 150 aaKnown RBP14.26□□□□□ -0.13
SCARB1-205ENST00000538291 RAMP1O60894 148 aa14.26□□□□□ -0.13
SCARB1-205ENST00000538291 LOC107984156A0A0G2JMH3 177 aa14.26□□□□□ -0.13
SCARB1-205ENST00000538291 H7C1H1 209 aa14.26□□□□□ -0.13
SCARB1-205ENST00000538291 MEF2CQ06413 473 aaPredicted RBP14.26□□□□□ -0.13
SCARB1-205ENST00000538291 LINC00305Q7Z4B0 112 aa14.26□□□□□ -0.13
SCARB1-205ENST00000538291 ARL17AQ8IVW1 177 aa14.26□□□□□ -0.13
SCARB1-205ENST00000538291 C9JCJ5 164 aa14.26□□□□□ -0.13
SCARB1-205ENST00000538291 ASPHD2Q6ICH7 369 aa14.26□□□□□ -0.13
SCARB1-205ENST00000538291 CYP2G1PQ6ZSU1 146 aa14.26□□□□□ -0.13
SCARB1-205ENST00000538291 ERASQ7Z444 233 aa14.26□□□□□ -0.13
SCARB1-205ENST00000538291 ITLN2Q8WWU7 325 aaPredicted RBP14.26□□□□□ -0.13
SCARB1-205ENST00000538291 ELF5Q9UKW6 265 aaPredicted RBP14.26□□□□□ -0.13
SCARB1-205ENST00000538291 C12orf77C9JDV5 145 aa14.25□□□□□ -0.13
SCARB1-205ENST00000538291 F12P00748 615 aaPredicted RBP14.25□□□□□ -0.13
SCARB1-205ENST00000538291 RPLP1P05386 114 aaKnown RBP14.25□□□□□ -0.13
SCARB1-205ENST00000538291 LTBRP36941 435 aa14.25□□□□□ -0.13
SCARB1-205ENST00000538291 PKIAP61925 76 aa14.25□□□□□ -0.13
SCARB1-205ENST00000538291 POC1AQ8NBT0 407 aa14.25□□□□□ -0.13
SCARB1-205ENST00000538291 SGK494Q96LW2 274 aa14.25□□□□□ -0.13
SCARB1-205ENST00000538291 MRPL18Q9H0U6 180 aaKnown RBP14.25□□□□□ -0.13
SCARB1-205ENST00000538291 KLK15Q9H2R5 256 aa14.25□□□□□ -0.13
SCARB1-205ENST00000538291 COL11A2P13942 1736 aaPredicted RBP14.25□□□□□ -0.13
SCARB1-205ENST00000538291 SCGB1A1P11684 91 aa14.25□□□□□ -0.13
SCARB1-205ENST00000538291 KLK2P20151 261 aa14.25□□□□□ -0.13
SCARB1-205ENST00000538291 TMEM105Q8N8V8 129 aa14.25□□□□□ -0.13
SCARB1-205ENST00000538291 JMJD8Q96S16 334 aa14.25□□□□□ -0.13
SCARB1-205ENST00000538291 PMCHL1Q16048 86 aa14.25□□□□□ -0.13
SCARB1-205ENST00000538291 AKIRIN1Q9H9L7 192 aaPredicted RBP14.25□□□□□ -0.13
SCARB1-205ENST00000538291 CASP8AP2Q9UKL3 1982 aa14.25□□□□□ -0.13
SCARB1-205ENST00000538291 LRRC37AA6NMS7 1700 aa14.24□□□□□ -0.13
SCARB1-205ENST00000538291 IGHV3-23P01764 117 aa14.24□□□□□ -0.13
SCARB1-205ENST00000538291 SUMO2P61956 95 aaKnown RBP14.24□□□□□ -0.13
SCARB1-205ENST00000538291 CD69Q07108 199 aa14.24□□□□□ -0.13
SCARB1-205ENST00000538291 TMEM101Q96IK0 257 aa14.24□□□□□ -0.13
SCARB1-205ENST00000538291 C21orf62Q9NYP8 219 aa14.24□□□□□ -0.13
SCARB1-205ENST00000538291 FAM201AQ5SY85 155 aa14.24□□□□□ -0.13
SCARB1-205ENST00000538291 OR10AG1Q8NH19 301 aa14.24□□□□□ -0.13
SCARB1-205ENST00000538291 IMMP1LQ96LU5 166 aa14.24□□□□□ -0.13
SCARB1-205ENST00000538291 TNS1Q9HBL0 1735 aaKnown RBP14.24□□□□□ -0.13
SCARB1-205ENST00000538291 IGHV3-49A0A0A0MS15 119 aa14.24□□□□□ -0.13
SCARB1-205ENST00000538291 C17orf100A8MU93 164 aa14.24□□□□□ -0.13
SCARB1-205ENST00000538291 ARPC1AQ92747 370 aa14.24□□□□□ -0.13
SCARB1-205ENST00000538291 KBTBD11-OT1A0A1B0GTJ5 212 aa14.24□□□□□ -0.13
SCARB1-205ENST00000538291 AGAP20933 346 aa14.24□□□□□ -0.13
SCARB1-205ENST00000538291 IFI27L2Q9H2X8 130 aa14.24□□□□□ -0.13
SCARB1-205ENST00000538291 TRBV20OR9-2A0A075B6H5 130 aa14.23□□□□□ -0.13
SCARB1-205ENST00000538291 IGHV1-2P23083 117 aa14.23□□□□□ -0.13
SCARB1-205ENST00000538291 GCHFRP30047 84 aa14.23□□□□□ -0.13
SCARB1-205ENST00000538291 ICAM4Q14773 271 aa14.23□□□□□ -0.13
SCARB1-205ENST00000538291 ZIC4Q8N9L1 334 aa14.23□□□□□ -0.13
SCARB1-205ENST00000538291 HIST1H4GQ99525 98 aa14.23□□□□□ -0.13
SCARB1-205ENST00000538291 ZNF660Q6AZW8 331 aaPredicted RBP14.23□□□□□ -0.13
SCARB1-205ENST00000538291 FAM90A1Q86YD7 464 aa14.23□□□□□ -0.13
SCARB1-205ENST00000538291 MRAP2Q96G30 205 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms