RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 TMEM218A2RU14 115 aa2.94□□□□□ -1.94
PTPN22-211ENST00000538253 FAM157AC9JC47 383 aa2.94□□□□□ -1.94
PTPN22-211ENST00000538253 GOSR2O14653 212 aa2.94□□□□□ -1.94
PTPN22-211ENST00000538253 MAGEB4O15481 346 aaPredicted RBP2.94□□□□□ -1.94
PTPN22-211ENST00000538253 RBFOX2O43251 390 aaKnown RBP eCLIP2.94□□□□□ -1.94
PTPN22-211ENST00000538253 OR2F2O95006 317 aa2.94□□□□□ -1.94
PTPN22-211ENST00000538253 AMBPP02760 352 aa2.94□□□□□ -1.94
PTPN22-211ENST00000538253 EGR1P18146 543 aa2.94□□□□□ -1.94
PTPN22-211ENST00000538253 CDK2P24941 298 aa2.94□□□□□ -1.94
PTPN22-211ENST00000538253 DUSP1P28562 367 aa2.94□□□□□ -1.94
PTPN22-211ENST00000538253 RPL29P47914 159 aaKnown RBP2.94□□□□□ -1.94
PTPN22-211ENST00000538253 GLIPR1P48060 266 aa2.94□□□□□ -1.94
PTPN22-211ENST00000538253 HILS1P60008 231 aa2.94□□□□□ -1.94
PTPN22-211ENST00000538253 MRPL23Q16540 153 aaKnown RBP2.94□□□□□ -1.94
PTPN22-211ENST00000538253 HLA-DRB5Q30154 266 aa2.94□□□□□ -1.94
PTPN22-211ENST00000538253 LAIR2Q6ISS4 152 aa2.94□□□□□ -1.94
PTPN22-211ENST00000538253 C12orf54Q6X4T0 127 aa2.94□□□□□ -1.94
PTPN22-211ENST00000538253 VMO1Q7Z5L0 202 aa2.94□□□□□ -1.94
PTPN22-211ENST00000538253 PDPNQ86YL7 162 aa2.94□□□□□ -1.94
PTPN22-211ENST00000538253 IZUMO1Q8IYV9 350 aa2.94□□□□□ -1.94
PTPN22-211ENST00000538253 OR51A4Q8NGJ6 313 aa2.94□□□□□ -1.94
PTPN22-211ENST00000538253 OR13C8Q8NGS7 320 aa2.94□□□□□ -1.94
PTPN22-211ENST00000538253 OR10AC1Q8NH08 325 aa2.94□□□□□ -1.94
PTPN22-211ENST00000538253 LGALS14Q8TCE9 139 aa2.94□□□□□ -1.94
PTPN22-211ENST00000538253 RASL11BQ9BPW5 248 aa2.94□□□□□ -1.94
PTPN22-211ENST00000538253 SULT4A1Q9BR01 284 aa2.94□□□□□ -1.94
PTPN22-211ENST00000538253 CHRDL1Q9BU40 450 aa2.94□□□□□ -1.94
PTPN22-211ENST00000538253 ABHD14AQ9BUJ0 271 aa2.94□□□□□ -1.94
PTPN22-211ENST00000538253 C1orf43Q9BWL3 253 aa2.94□□□□□ -1.94
PTPN22-211ENST00000538253 TAF9BQ9HBM6 251 aa2.94□□□□□ -1.94
PTPN22-211ENST00000538253 COMMD9Q9P000 198 aa2.94□□□□□ -1.94
PTPN22-211ENST00000538253 RNF114Q9Y508 228 aa2.94□□□□□ -1.94
PTPN22-211ENST00000538253 HEATR1Q9H583 2144 aaKnown RBP2.93□□□□□ -1.94
PTPN22-211ENST00000538253 PCNX3Q9H6A9 2034 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 OR11H12B2RN74 326 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 ZNF736B4DX44 427 aaPredicted RBP2.93□□□□□ -1.94
PTPN22-211ENST00000538253 LYNX1G3V0Z9 82 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 GEMIN2O14893 280 aaKnown RBP2.93□□□□□ -1.94
PTPN22-211ENST00000538253 SNAPC5O75971 98 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 MT-ND4LP03901 98 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 RNASE1P07998 156 aaKnown RBP2.93□□□□□ -1.94
PTPN22-211ENST00000538253 OR10J4P0C629 311 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 AKAIN1P0CW23 69 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 LYNX1P0DP58 116 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 SNU13P55769 128 aaKnown RBP2.93□□□□□ -1.94
PTPN22-211ENST00000538253 UCP3P55916 312 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 KHDC3LQ587J8 217 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 OTPQ5XKR4 325 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 TMEM200BQ69YZ2 307 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 ZNF841Q6ZN19 808 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 WDR86Q86TI4 376 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 HOGA1Q86XE5 327 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 CD177Q8N6Q3 437 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 TMEM229BQ8NBD8 167 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 OR11H1Q8NG94 326 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 OR4P4Q8NGL7 312 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 OR11H2Q8NH07 326 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 LHX4Q969G2 390 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 SLC25A21Q9BQT8 299 aaPredicted RBP2.93□□□□□ -1.94
PTPN22-211ENST00000538253 OR51E2Q9H255 320 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 LIME1Q9H400 295 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 Q9N2K0 584 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 VPREB3Q9UKI3 123 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 MOB4Q9Y3A3 225 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 WASHC3Q9Y3C0 194 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 UFC1Q9Y3C8 167 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 PIEZO2Q9H5I5 2752 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 TRAV40A0A0B4J280 105 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 DUXBA0A1W2PPF3 345 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 KIAA1324LA8MWY0 1029 aaPredicted RBP2.93□□□□□ -1.94
PTPN22-211ENST00000538253 H0Y980 276 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 RNASEK-C17orf49H0YIS7 233 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 J3QR06 171 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 MFNGO00587 321 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 PIN1P1O15428 100 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 NDUFS7O75251 213 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 MMP23AO75900 390 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 HBZP02008 142 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 ATXN7L3Q14CW9 347 aaPredicted RBP2.93□□□□□ -1.94
PTPN22-211ENST00000538253 TNXAQ16473 311 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 COL5A1-AS1Q5SY13 56 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 STEAP1BQ6NZ63 245 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 ZNF880Q6PDB4 577 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 TCF24Q7RTU0 167 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 FAM219AQ8IW50 185 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 ZCCHC24Q8N2G6 241 aaKnown RBP2.93□□□□□ -1.94
PTPN22-211ENST00000538253 PNKDQ8N490 385 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 OR52B4Q8NGK2 314 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 OSR1Q8TAX0 266 aaPredicted RBP2.93□□□□□ -1.94
PTPN22-211ENST00000538253 TMPRSS13Q9BYE2 586 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 HRH4Q9H3N8 390 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 BANF2Q9H503 90 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 GPN1Q9HCN4 374 aaPredicted RBP2.93□□□□□ -1.94
PTPN22-211ENST00000538253 SMCO4Q9NRQ5 59 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 HSPB7Q9UBY9 170 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 ABCA4P78363 2273 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 SZT2Q5T011 3432 aa2.93□□□□□ -1.94
PTPN22-211ENST00000538253 A0A096LNT2 108 aa2.92□□□□□ -1.94
PTPN22-211ENST00000538253 IGHV2-26A0A0B4J1V2 119 aa2.92□□□□□ -1.94
PTPN22-211ENST00000538253 A0A1W2PPK0 400 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms