RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 IGHV3-21A0A0B4J1V1 117 aa7.19□□□□□ -1.26
UBE3B-208ENST00000538070 HPRT1P00492 218 aa7.19□□□□□ -1.26
UBE3B-208ENST00000538070 ACAA1P09110 424 aaPredicted RBP7.19□□□□□ -1.26
UBE3B-208ENST00000538070 PRB4P10163 310 aaPredicted RBP7.19□□□□□ -1.26
UBE3B-208ENST00000538070 RPL31P62899 125 aaKnown RBP7.19□□□□□ -1.26
UBE3B-208ENST00000538070 GFI1BQ5VTD9 330 aa7.19□□□□□ -1.26
UBE3B-208ENST00000538070 Q8TCH9 128 aa7.19□□□□□ -1.26
UBE3B-208ENST00000538070 CIB3Q96Q77 187 aaPredicted RBP7.19□□□□□ -1.26
UBE3B-208ENST00000538070 TCF19Q9Y242 345 aa7.19□□□□□ -1.26
UBE3B-208ENST00000538070 IGKV1-16P04430 117 aa7.19□□□□□ -1.26
UBE3B-208ENST00000538070 SERF2P84101 59 aa7.19□□□□□ -1.26
UBE3B-208ENST00000538070 MEF2BQ02080 365 aaPredicted RBP7.19□□□□□ -1.26
UBE3B-208ENST00000538070 ZNF66Q6ZN08 573 aa7.19□□□□□ -1.26
UBE3B-208ENST00000538070 ASCL5Q7RTU5 278 aa7.19□□□□□ -1.26
UBE3B-208ENST00000538070 LHFPL4Q7Z7J7 247 aa7.19□□□□□ -1.26
UBE3B-208ENST00000538070 LINC01560Q8TB33 94 aa7.19□□□□□ -1.26
UBE3B-208ENST00000538070 FAM210BQ96KR6 192 aa7.19□□□□□ -1.26
UBE3B-208ENST00000538070 MS4A5Q9H3V2 200 aa7.19□□□□□ -1.26
UBE3B-208ENST00000538070 DOK5Q9P104 306 aa7.19□□□□□ -1.26
UBE3B-208ENST00000538070 DPRXA6NFQ7 191 aa7.19□□□□□ -1.26
UBE3B-208ENST00000538070 C15orf62A8K5M9 175 aa7.19□□□□□ -1.26
UBE3B-208ENST00000538070 C11orf94C9JXX5 98 aa7.19□□□□□ -1.26
UBE3B-208ENST00000538070 C17orf112F2Z3M2 114 aa7.19□□□□□ -1.26
UBE3B-208ENST00000538070 ATP5G3P48201 142 aa7.19□□□□□ -1.26
UBE3B-208ENST00000538070 MRGPRGQ86SM5 289 aa7.19□□□□□ -1.26
UBE3B-208ENST00000538070 OR10X1Q8NGY0 326 aa7.19□□□□□ -1.26
UBE3B-208ENST00000538070 FAM57AQ8TBR7 257 aa7.19□□□□□ -1.26
UBE3B-208ENST00000538070 ACY3Q96HD9 319 aa7.19□□□□□ -1.26
UBE3B-208ENST00000538070 DERL1Q9BUN8 251 aa7.19□□□□□ -1.26
UBE3B-208ENST00000538070 ELOVL1Q9BW60 279 aa7.19□□□□□ -1.26
UBE3B-208ENST00000538070 IFI27L2Q9H2X8 130 aa7.19□□□□□ -1.26
UBE3B-208ENST00000538070 SLC35D1Q9NTN3 355 aa7.19□□□□□ -1.26
UBE3B-208ENST00000538070 CACNA1AO00555 2505 aa7.18□□□□□ -1.26
UBE3B-208ENST00000538070 A0A1W2PRD5 423 aa7.18□□□□□ -1.26
UBE3B-208ENST00000538070 A0A1W2PRF3 423 aa7.18□□□□□ -1.26
UBE3B-208ENST00000538070 A0A1W2PRM7 423 aa7.18□□□□□ -1.26
UBE3B-208ENST00000538070 S100PP25815 95 aa7.18□□□□□ -1.26
UBE3B-208ENST00000538070 TMEM241Q24JQ0 296 aa7.18□□□□□ -1.26
UBE3B-208ENST00000538070 FAM90A2PQ658T7 463 aa7.18□□□□□ -1.26
UBE3B-208ENST00000538070 CA5BP1Q8WTZ4 195 aa7.18□□□□□ -1.26
UBE3B-208ENST00000538070 FAM216AQ8WUB2 273 aa7.18□□□□□ -1.26
UBE3B-208ENST00000538070 SLC25A10Q9UBX3 287 aaPredicted RBP7.18□□□□□ -1.26
UBE3B-208ENST00000538070 DYSFO75923 2080 aa7.18□□□□□ -1.26
UBE3B-208ENST00000538070 H7BYZ3 331 aa7.18□□□□□ -1.26
UBE3B-208ENST00000538070 LY6HO94772 140 aa7.18□□□□□ -1.26
UBE3B-208ENST00000538070 NDUFB4O95168 129 aa7.18□□□□□ -1.26
UBE3B-208ENST00000538070 PAX6P26367 422 aa7.18□□□□□ -1.26
UBE3B-208ENST00000538070 CHRNB4P30926 498 aa7.18□□□□□ -1.26
UBE3B-208ENST00000538070 FAM3BP58499 235 aaPredicted RBP7.18□□□□□ -1.26
UBE3B-208ENST00000538070 ELOBQ15370 118 aa7.18□□□□□ -1.26
UBE3B-208ENST00000538070 ACOT6Q3I5F7 207 aaPredicted RBP7.18□□□□□ -1.26
UBE3B-208ENST00000538070 OR4A47Q6IF82 309 aa7.18□□□□□ -1.26
UBE3B-208ENST00000538070 SPNS3Q6ZMD2 512 aa7.18□□□□□ -1.26
UBE3B-208ENST00000538070 C16orf82Q7Z2V1 217 aa7.18□□□□□ -1.26
UBE3B-208ENST00000538070 OR10W1Q8NGF6 305 aa7.18□□□□□ -1.26
UBE3B-208ENST00000538070 OR4S2Q8NH73 311 aa7.18□□□□□ -1.26
UBE3B-208ENST00000538070 PRR7Q8TB68 274 aa7.18□□□□□ -1.26
UBE3B-208ENST00000538070 IGFBPL1Q8WX77 278 aa7.18□□□□□ -1.26
UBE3B-208ENST00000538070 PARLQ9H300 379 aa7.18□□□□□ -1.26
UBE3B-208ENST00000538070 JPT1Q9UK76 154 aa7.18□□□□□ -1.26
UBE3B-208ENST00000538070 CTXND1A0A1B0GTU2 59 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 SPINK4O60575 86 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 REG1AP05451 166 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 S100A2P29034 98 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 CCKARP32238 428 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 CD81P60033 236 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 DIAPH2-AS1Q14236 149 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 SPATA31B1PQ5VZV4 182 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 LYPD2Q6UXB3 125 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 SLC35E3Q7Z769 313 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 TMEM37Q8WXS4 190 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 FRZBQ92765 325 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 WFIKKN1Q96NZ8 548 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 OR5B12Q96R08 314 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 KBTBD11-OT1A0A1B0GTJ5 212 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 FAM90A26D6RGX4 464 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 CLDN34H7C241 214 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 AP4M1O00189 453 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 CA2P00918 260 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 THBS3P49746 956 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 LOXL3P58215 753 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 C17orf58Q2M2W7 97 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 BSXQ3C1V8 233 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 ZNF383Q8NA42 475 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 OR13D1Q8NGV5 346 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 PSMG3Q9BT73 122 aaPredicted RBP7.17□□□□□ -1.26
UBE3B-208ENST00000538070 SFXN3Q9BWM7 321 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 CISD1Q9NZ45 108 aaKnown RBP7.17□□□□□ -1.26
UBE3B-208ENST00000538070 OR51B2Q9Y5P1 312 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 PXMP4Q9Y6I8 212 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 J3QR06 171 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 ARL14EPLP0DKL9 152 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 NPY1RP25929 384 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 HTD2P86397 168 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 C10orf55Q5SWW7 151 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 C1orf87Q8N0U7 546 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 OR10D4PQ8NGN7 298 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 ABHD5Q8WTS1 349 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 SVEP1Q4LDE5 3571 aa7.17□□□□□ -1.26
UBE3B-208ENST00000538070 NKX6-3A6NJ46 265 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms