RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 ZNF48Q96MX3 618 aaPredicted RBP4.89□□□□□ -1.63
CSMD1-215ENST00000537824 RASL11BQ9BPW5 248 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 AHDC1Q5TGY3 1603 aaPredicted RBP4.89□□□□□ -1.63
CSMD1-215ENST00000537824 A0A0U1RQV5 110 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 NKX2-2O95096 273 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 FSTP19883 344 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 CYSLTR1Q9Y271 337 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 ALG1L2C9J202 215 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 H0Y8X5 98 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 CA11O75493 328 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 IGLV3-27P01718 113 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 PATE4P0C8F1 98 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 ADMP35318 185 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 NR2C2APQ86WQ0 139 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 MRPL43Q8N983 215 aaKnown RBP4.89□□□□□ -1.63
CSMD1-215ENST00000537824 GPR146Q96CH1 333 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 HCFC2Q9Y5Z7 792 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 PPP1R17O96001 155 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 CT62P0C5K7 136 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 TTC9CQ8N5M4 171 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 SLC25A28Q96A46 364 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 LOC105371242A0A075B767 164 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 A0A087X0K7 114 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 PPIAL4CA0A0B4J2A2 164 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 PPIAL4GP0DN37 164 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 CRYBB3P26998 211 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.89□□□□□ -1.63
CSMD1-215ENST00000537824 TNFRSF14Q92956 283 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 IGLV3-16A0A075B6K0 115 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 COX7A1P24310 79 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 AICDAQ9GZX7 198 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 TRAV5A0A0B4J249 113 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 SSTR5P35346 364 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 ZNF83P51522 516 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 LPAL2Q16609 132 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 TWSG1Q9GZX9 223 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 RPL34P49207 117 aaKnown RBP4.89□□□□□ -1.63
CSMD1-215ENST00000537824 ANKRD33Q7Z3H0 272 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 DUSP23Q9BVJ7 150 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 IGHV1-69-2A0A0G2JMI3 117 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 LYZL6O75951 148 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 CCL2P13500 99 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 KIR3DS1Q14943 382 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 UBALD2Q8IYN6 164 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 YBX2Q9Y2T7 364 aaKnown RBP4.89□□□□□ -1.63
CSMD1-215ENST00000537824 SERTM1A2A2V5 107 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 A8MWV9 139 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 KLRC4-KLRK1H3BQV0 150 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 APOHP02749 345 aaPredicted RBP4.89□□□□□ -1.63
CSMD1-215ENST00000537824 GGTLC2Q14390 218 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 TRBV5-5A0A0J9YX44 114 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 H3BTX0 84 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 RPL36A-HNRNPH2H7BZ11 118 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 LEPP41159 167 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 BRWD3Q6RI45 1802 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 J3QR06 171 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 NDUFA2O43678 99 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 CA7P43166 264 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 RPL31P62899 125 aaKnown RBP4.88□□□□□ -1.63
CSMD1-215ENST00000537824 DEFB127Q9H1M4 99 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 IGHV3OR15-7A0A075B7D8 119 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 SCO2A0A1W2PP80 73 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 FAM157AC9JC47 383 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 H0YIG0 161 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 LINC01387J3KSC0 135 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 HSD52Q0P140 79 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 CD200R1LQ6Q8B3 271 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 G6PC2Q9NQR9 355 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 GAGE12BA1L429 117 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 PEX11BO96011 259 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 RAC3P60763 192 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 RPS20P60866 119 aaKnown RBP4.88□□□□□ -1.63
CSMD1-215ENST00000537824 SSBP2P81877 361 aaPredicted RBP4.88□□□□□ -1.63
CSMD1-215ENST00000537824 RTN4RL2Q86UN3 420 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 FER1L6-AS1Q8NA97 138 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 MRGPRX3Q96LB0 322 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 A0A0G2JMM0 328 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 A0A1W2PPB8 328 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 KIR3DP1A8MWS1 328 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 CXCL1P09341 107 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 RBPJQ06330 500 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 FADS6Q8N9I5 356 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 TRAV2A0A0B4J234 112 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 MUC21A0A0G2JKD1 596 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 MUC21A0A140T8X8 626 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 TNXAQ16473 311 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 MUC21Q5SSG8 566 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 FOXD3Q9UJU5 478 aaPredicted RBP4.88□□□□□ -1.63
CSMD1-215ENST00000537824 MRPS16Q9Y3D3 137 aaKnown RBP4.88□□□□□ -1.63
CSMD1-215ENST00000537824 PHLDA3Q9Y5J5 127 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 R4GN57 208 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 ATP5LO75964 103 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 C1QCP02747 245 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 IGFBP6P24592 240 aaPredicted RBP4.88□□□□□ -1.63
CSMD1-215ENST00000537824 CYP2G1PQ6ZSU1 146 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 PRSS41Q7RTY9 318 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 CCL4L1Q8NHW4 92 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 RND1Q92730 232 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 TRAV9-1A0A075B6T8 112 aa4.88□□□□□ -1.63
CSMD1-215ENST00000537824 CD1AP06126 327 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms