RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 SAR1AQ9NR31 198 aa6.45□□□□□ -1.38
CPSF7-217ENST00000537162 ARL2BPQ9Y2Y0 163 aa6.45□□□□□ -1.38
CPSF7-217ENST00000537162 YTHDF2Q9Y5A9 579 aaKnown RBP6.45□□□□□ -1.38
CPSF7-217ENST00000537162 DPPA5A6NC42 116 aa6.44□□□□□ -1.38
CPSF7-217ENST00000537162 C15orf62A8K5M9 175 aa6.44□□□□□ -1.38
CPSF7-217ENST00000537162 DNASE2O00115 360 aaPredicted RBP6.44□□□□□ -1.38
CPSF7-217ENST00000537162 EBAG9O00559 213 aa6.44□□□□□ -1.38
CPSF7-217ENST00000537162 ITGB1BP1O14713 200 aa6.44□□□□□ -1.38
CPSF7-217ENST00000537162 DCTN3O75935 186 aa6.44□□□□□ -1.38
CPSF7-217ENST00000537162 APOHP02749 345 aaPredicted RBP6.44□□□□□ -1.38
CPSF7-217ENST00000537162 SAA1P0DJI8 122 aaPredicted RBP6.44□□□□□ -1.38
CPSF7-217ENST00000537162 ATP6V1B2P21281 511 aa6.44□□□□□ -1.38
CPSF7-217ENST00000537162 CAPGP40121 348 aa6.44□□□□□ -1.38
CPSF7-217ENST00000537162 OR2B8PP59922 312 aa6.44□□□□□ -1.38
CPSF7-217ENST00000537162 ID3Q02535 119 aa6.44□□□□□ -1.38
CPSF7-217ENST00000537162 ZNF85Q03923 595 aa6.44□□□□□ -1.38
CPSF7-217ENST00000537162 MAPRE2Q15555 327 aa6.44□□□□□ -1.38
CPSF7-217ENST00000537162 ESRGQ1W209 222 aa6.44□□□□□ -1.38
CPSF7-217ENST00000537162 LRRTM1Q86UE6 522 aa6.44□□□□□ -1.38
CPSF7-217ENST00000537162 PARP16Q8N5Y8 322 aa6.44□□□□□ -1.38
CPSF7-217ENST00000537162 OR5D14Q8NGL3 314 aa6.44□□□□□ -1.38
CPSF7-217ENST00000537162 UPK3BQ9BT76 320 aa6.44□□□□□ -1.38
CPSF7-217ENST00000537162 MRPL18Q9H0U6 180 aaKnown RBP6.44□□□□□ -1.38
CPSF7-217ENST00000537162 ABCD2Q9UBJ2 740 aa6.44□□□□□ -1.38
CPSF7-217ENST00000537162 SAMHD1Q9Y3Z3 626 aaKnown RBP6.44□□□□□ -1.38
CPSF7-217ENST00000537162 GMPPBQ9Y5P6 360 aa6.44□□□□□ -1.38
CPSF7-217ENST00000537162 PUS1Q9Y606 427 aaKnown RBP eCLIP6.44□□□□□ -1.38
CPSF7-217ENST00000537162 RFNGQ9Y644 331 aa6.44□□□□□ -1.38
CPSF7-217ENST00000537162 IGHV3-66A0A0C4DH42 116 aa6.43□□□□□ -1.38
CPSF7-217ENST00000537162 TEX48A0A1B0GUV7 120 aa6.43□□□□□ -1.38
CPSF7-217ENST00000537162 CGB1A6NKQ9 187 aa6.43□□□□□ -1.38
CPSF7-217ENST00000537162 OR4C45A6NMZ5 311 aa6.43□□□□□ -1.38
CPSF7-217ENST00000537162 F5H768 121 aa6.43□□□□□ -1.38
CPSF7-217ENST00000537162 NUPL2O15504 423 aaKnown RBP6.43□□□□□ -1.38
CPSF7-217ENST00000537162 ACTL6BO94805 426 aa6.43□□□□□ -1.38
CPSF7-217ENST00000537162 ZNF688P0C7X2 276 aa6.43□□□□□ -1.38
CPSF7-217ENST00000537162 GTF2F2P13984 249 aa6.43□□□□□ -1.38
CPSF7-217ENST00000537162 CEACAM6P40199 344 aa6.43□□□□□ -1.38
CPSF7-217ENST00000537162 PAFAH1B2P68402 229 aa6.43□□□□□ -1.38
CPSF7-217ENST00000537162 AADACL4Q5VUY2 407 aa6.43□□□□□ -1.38
CPSF7-217ENST00000537162 NXNL2Q5VZ03 156 aa6.43□□□□□ -1.38
CPSF7-217ENST00000537162 CGB2Q6NT52 195 aa6.43□□□□□ -1.38
CPSF7-217ENST00000537162 Q6ZSA8 131 aa6.43□□□□□ -1.38
CPSF7-217ENST00000537162 ST8SIA2Q92186 375 aa6.43□□□□□ -1.38
CPSF7-217ENST00000537162 CMTM3Q96MX0 182 aa6.43□□□□□ -1.38
CPSF7-217ENST00000537162 IL4I1Q96RQ9 567 aa6.43□□□□□ -1.38
CPSF7-217ENST00000537162 HOPXQ9BPY8 73 aaPredicted RBP6.43□□□□□ -1.38
CPSF7-217ENST00000537162 ELAC2Q9BQ52 826 aaKnown RBP6.43□□□□□ -1.38
CPSF7-217ENST00000537162 TM2D1Q9BX74 207 aa6.43□□□□□ -1.38
CPSF7-217ENST00000537162 SPACA1Q9HBV2 294 aa6.43□□□□□ -1.38
CPSF7-217ENST00000537162 ABRACLQ9P1F3 81 aa6.43□□□□□ -1.38
CPSF7-217ENST00000537162 HSF4Q9ULV5 492 aa6.43□□□□□ -1.38
CPSF7-217ENST00000537162 IGHV3-21A0A0B4J1V1 117 aa6.42□□□□□ -1.38
CPSF7-217ENST00000537162 CA11O75493 328 aa6.42□□□□□ -1.38
CPSF7-217ENST00000537162 CRYZL1O95825 349 aa6.42□□□□□ -1.38
CPSF7-217ENST00000537162 ZNF735P0CB33 412 aa6.42□□□□□ -1.38
CPSF7-217ENST00000537162 HIST1H1BP16401 226 aaKnown RBP6.42□□□□□ -1.38
CPSF7-217ENST00000537162 RAB3AP20336 220 aa6.42□□□□□ -1.38
CPSF7-217ENST00000537162 PTBP1P26599 531 aaKnown RBP eCLIP6.42□□□□□ -1.38
CPSF7-217ENST00000537162 CDK10Q15131 360 aa6.42□□□□□ -1.38
CPSF7-217ENST00000537162 MMD2Q8IY49 270 aa6.42□□□□□ -1.38
CPSF7-217ENST00000537162 CBR4Q8N4T8 237 aa6.42□□□□□ -1.38
CPSF7-217ENST00000537162 OR10H4Q8NGA5 316 aa6.42□□□□□ -1.38
CPSF7-217ENST00000537162 DAZAP1Q96EP5 407 aaKnown RBP6.42□□□□□ -1.38
CPSF7-217ENST00000537162 BANF2Q9H503 90 aa6.42□□□□□ -1.38
CPSF7-217ENST00000537162 TAS2R4Q9NYW5 299 aa6.42□□□□□ -1.38
CPSF7-217ENST00000537162 RABAC1Q9UI14 185 aa6.42□□□□□ -1.38
CPSF7-217ENST00000537162 SMIM9A6NGZ8 99 aa6.41□□□□□ -1.38
CPSF7-217ENST00000537162 K7EQG2 157 aa6.41□□□□□ -1.38
CPSF7-217ENST00000537162 ATP5HO75947 161 aa6.41□□□□□ -1.38
CPSF7-217ENST00000537162 OR2T7P0C7T2 308 aa6.41□□□□□ -1.38
CPSF7-217ENST00000537162 DEFA4P12838 97 aa6.41□□□□□ -1.38
CPSF7-217ENST00000537162 OSMP13725 252 aa6.41□□□□□ -1.38
CPSF7-217ENST00000537162 RPL27AP46776 148 aaKnown RBP6.41□□□□□ -1.38
CPSF7-217ENST00000537162 CCR9P51686 369 aa6.41□□□□□ -1.38
CPSF7-217ENST00000537162 FXYD7P58549 80 aa6.41□□□□□ -1.38
CPSF7-217ENST00000537162 ATP6AP1Q15904 470 aa6.41□□□□□ -1.38
CPSF7-217ENST00000537162 FDX2Q6P4F2 183 aa6.41□□□□□ -1.38
CPSF7-217ENST00000537162 VKORC1L1Q8N0U8 176 aa6.41□□□□□ -1.38
CPSF7-217ENST00000537162 PTX4Q96A99 478 aa6.41□□□□□ -1.38
CPSF7-217ENST00000537162 RAB40CQ96S21 281 aa6.41□□□□□ -1.38
CPSF7-217ENST00000537162 SDHAF2Q9NX18 166 aa6.41□□□□□ -1.38
CPSF7-217ENST00000537162 MRPS16Q9Y3D3 137 aaKnown RBP6.41□□□□□ -1.38
CPSF7-217ENST00000537162 LRRC42Q9Y546 428 aa6.41□□□□□ -1.38
CPSF7-217ENST00000537162 LOC102723971A0A1B0GUV8 181 aa6.4□□□□□ -1.38
CPSF7-217ENST00000537162 GNRHRP30968 328 aa6.4□□□□□ -1.38
CPSF7-217ENST00000537162 PSME3P61289 254 aa6.4□□□□□ -1.38
CPSF7-217ENST00000537162 RPL11P62913 178 aaKnown RBP6.4□□□□□ -1.38
CPSF7-217ENST00000537162 FAM220AQ7Z4H9 259 aa6.4□□□□□ -1.38
CPSF7-217ENST00000537162 GIPC3Q8TF64 312 aa6.4□□□□□ -1.38
CPSF7-217ENST00000537162 BSCL2Q96G97 398 aaPredicted RBP6.4□□□□□ -1.38
CPSF7-217ENST00000537162 OR10C1Q96KK4 312 aa6.4□□□□□ -1.38
CPSF7-217ENST00000537162 NSMCE2Q96MF7 247 aa6.4□□□□□ -1.38
CPSF7-217ENST00000537162 C1QTNF4Q9BXJ3 329 aa6.4□□□□□ -1.38
CPSF7-217ENST00000537162 MAGT1Q9H0U3 335 aa6.4□□□□□ -1.38
CPSF7-217ENST00000537162 REEP1Q9H902 201 aa6.4□□□□□ -1.38
CPSF7-217ENST00000537162 TRAV2A0A0B4J234 112 aa6.39□□□□□ -1.39
CPSF7-217ENST00000537162 LINC00473A8K010 186 aa6.39□□□□□ -1.39
CPSF7-217ENST00000537162 RAB27BO00194 218 aa6.39□□□□□ -1.39
CPSF7-217ENST00000537162 RS1O15537 224 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms