RNA–Protein interactions for RNA: ENST00000537024.5

SNHG1-203, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-203ENST00000537024 OR8U9P0C7N5 309 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 OCMP0CE72 109 aaPredicted RBP2.68□□□□□ -1.98
SNHG1-203ENST00000537024 PGAM1P18669 254 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 CFL1P23528 166 aaKnown RBP2.68□□□□□ -1.98
SNHG1-203ENST00000537024 HTR2CP28335 458 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 CRISP1P54107 249 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 AP3S2P59780 193 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 LYZP61626 148 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 NUTF2P61970 127 aaKnown RBP2.68□□□□□ -1.98
SNHG1-203ENST00000537024 SLC35B1P78383 322 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 ZNF616Q08AN1 781 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 BNIP2Q12982 314 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 MPPED2Q15777 294 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 UAP1Q16222 522 aaPredicted RBP2.68□□□□□ -1.98
SNHG1-203ENST00000537024 MAPK14Q16539 360 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 RFX4Q33E94 735 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 RNF212Q495C1 297 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 TEX36Q5VZQ5 186 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 THOC7Q6I9Y2 204 aaKnown RBP2.68□□□□□ -1.98
SNHG1-203ENST00000537024 FAM71E1Q6IPT2 247 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 IL34Q6ZMJ4 242 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 OLIG3Q7RTU3 272 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 MKXQ8IYA7 352 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 SYS1Q8N2H4 156 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 JAGN1Q8N5M9 183 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 SUMF2Q8NBJ7 301 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 INO80EQ8NBZ0 244 aaPredicted RBP2.68□□□□□ -1.98
SNHG1-203ENST00000537024 OR8G5Q8NG78 346 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 OR13G1Q8NGZ3 307 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 MFSD8Q8NHS3 518 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 DTD1Q8TEA8 209 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 C1orf54Q8WWF1 131 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 H1FXQ92522 213 aaKnown RBP2.68□□□□□ -1.98
SNHG1-203ENST00000537024 SLC35B4Q969S0 331 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 ISOC2Q96AB3 205 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 DGCR14Q96DF8 476 aaKnown RBP2.68□□□□□ -1.98
SNHG1-203ENST00000537024 CMBLQ96DG6 245 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 CMTM5Q96DZ9 223 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 MALSU1Q96EH3 234 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 PHYHIPLQ96FC7 376 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 SDF2Q99470 211 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 ZNF251Q9BRH9 671 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 GABARAPL3Q9BY60 117 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 CCDC59Q9P031 241 aaKnown RBP2.68□□□□□ -1.98
SNHG1-203ENST00000537024 VPS29Q9UBQ0 182 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 KIF25-AS1Q9Y6Z4 181 aa2.68□□□□□ -1.98
SNHG1-203ENST00000537024 IGHV3OR15-7A0A075B7D8 119 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 TRAV39A0A0B4J263 110 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 CLDN24A6NM45 220 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 LYRM9A8MSI8 78 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 CENPBD1B2RD01 187 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 K7EN84 100 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 PEX7O00628 323 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 NDUFB3O43676 98 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 TNFAIP8O95379 198 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 FADS2O95864 444 aaKnown RBP2.67□□□□□ -1.98
SNHG1-203ENST00000537024 MOSP00540 346 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 INSP01308 110 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 GYPCP04921 128 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 RPS17P08708 135 aaKnown RBP2.67□□□□□ -1.98
SNHG1-203ENST00000537024 MGMTP16455 207 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 ZNF32P17041 273 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 HLA-GP17693 338 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 PRPS1L1P21108 318 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 CXCR1P25024 350 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 HSD11B1P28845 292 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 KDELR2P33947 212 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 CD200P41217 278 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 RBM34P42696 430 aaKnown RBP2.67□□□□□ -1.98
SNHG1-203ENST00000537024 FGF8P55075 233 aaPredicted RBP2.67□□□□□ -1.98
SNHG1-203ENST00000537024 PITPNAQ00169 270 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 REG3AQ06141 175 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 C2orf80Q0P641 193 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 ZNF79Q15937 498 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 C5orf64Q2M2E5 130 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 SPIN4Q56A73 249 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 SPANXN3Q5MJ09 141 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 C1orf134Q5TEV5 83 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 HDDC2Q7Z4H3 204 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 SPATA12Q7Z6I5 190 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 OAFQ86UD1 273 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 C10orf111Q8N326 155 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 MREGQ8N565 214 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 OR5K1Q8NHB7 308 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 STAG3L4Q8TBR4 150 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 TMEM239Q8WW34 195 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 BAALCQ8WXS3 180 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 PACRGQ96M98 296 aaPredicted RBP2.67□□□□□ -1.98
SNHG1-203ENST00000537024 OPALINQ96PE5 141 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 CCL13Q99616 98 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 ACTR3CQ9C0K3 210 aaPredicted RBP2.67□□□□□ -1.98
SNHG1-203ENST00000537024 TOLLIPQ9H0E2 274 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 PLEKHA1Q9HB21 404 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 GLTPQ9NZD2 209 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 LINC00527Q9UJ94 153 aa2.67□□□□□ -1.98
SNHG1-203ENST00000537024 IQCF6A8MYZ5 107 aa2.66□□□□□ -1.98
SNHG1-203ENST00000537024 LRRN3E7EW58 273 aa2.66□□□□□ -1.98
SNHG1-203ENST00000537024 I3L521 148 aa2.66□□□□□ -1.98
SNHG1-203ENST00000537024 M0QZK8 103 aa2.66□□□□□ -1.98
SNHG1-203ENST00000537024 HLA-DPB1P04440 258 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms