RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 ZNF16P17020 682 aaPredicted RBP13.04□□□□□ -0.32
CHFR-213ENST00000536843 RAC3P60763 192 aa13.04□□□□□ -0.32
CHFR-213ENST00000536843 TMEM136Q6ZRR5 245 aa13.04□□□□□ -0.32
CHFR-213ENST00000536843 SPSB4Q96A44 273 aa13.04□□□□□ -0.32
CHFR-213ENST00000536843 SMIM12Q96EX1 92 aa13.04□□□□□ -0.32
CHFR-213ENST00000536843 OR1A1Q9P1Q5 309 aa13.04□□□□□ -0.32
CHFR-213ENST00000536843 A0A1W2PPV4 95 aa13.04□□□□□ -0.32
CHFR-213ENST00000536843 ZNF32P17041 273 aa13.04□□□□□ -0.32
CHFR-213ENST00000536843 CX3CL1P78423 397 aa13.04□□□□□ -0.32
CHFR-213ENST00000536843 TGFBR3Q03167 851 aa13.04□□□□□ -0.32
CHFR-213ENST00000536843 VHLLQ6RSH7 139 aa13.04□□□□□ -0.32
CHFR-213ENST00000536843 GGNQ86UU5 652 aa13.04□□□□□ -0.32
CHFR-213ENST00000536843 ATOH7Q8N100 152 aa13.04□□□□□ -0.32
CHFR-213ENST00000536843 TSKUQ8WUA8 353 aa13.04□□□□□ -0.32
CHFR-213ENST00000536843 SF3B5Q9BWJ5 86 aaKnown RBP13.04□□□□□ -0.32
CHFR-213ENST00000536843 CLEC7AQ9BXN2 247 aa13.04□□□□□ -0.32
CHFR-213ENST00000536843 RBM7Q9Y580 266 aaKnown RBP13.04□□□□□ -0.32
CHFR-213ENST00000536843 CXCL13O43927 109 aa13.03□□□□□ -0.32
CHFR-213ENST00000536843 P0C879 139 aa13.03□□□□□ -0.32
CHFR-213ENST00000536843 PSG1P11464 419 aa13.03□□□□□ -0.32
CHFR-213ENST00000536843 GCSAMLQ5JQS6 135 aa13.03□□□□□ -0.32
CHFR-213ENST00000536843 OR8I2Q8N0Y5 310 aa13.03□□□□□ -0.32
CHFR-213ENST00000536843 CT55Q8WUE5 264 aa13.03□□□□□ -0.32
CHFR-213ENST00000536843 LOXL2Q9Y4K0 774 aa13.03□□□□□ -0.32
CHFR-213ENST00000536843 LRRC30A6NM36 301 aa13.03□□□□□ -0.32
CHFR-213ENST00000536843 H0YJW9 148 aa13.03□□□□□ -0.32
CHFR-213ENST00000536843 K7ERU9 68 aa13.03□□□□□ -0.32
CHFR-213ENST00000536843 TAX1BP3O14907 124 aa13.03□□□□□ -0.32
CHFR-213ENST00000536843 PATE4P0C8F1 98 aa13.03□□□□□ -0.32
CHFR-213ENST00000536843 WIPI1Q5MNZ9 446 aaPredicted RBP13.03□□□□□ -0.32
CHFR-213ENST00000536843 LINC00596Q86U02 117 aa13.03□□□□□ -0.32
CHFR-213ENST00000536843 C11orf52Q96A22 123 aa13.03□□□□□ -0.32
CHFR-213ENST00000536843 TMEM204Q9BSN7 226 aa13.03□□□□□ -0.32
CHFR-213ENST00000536843 HES4Q9HCC6 221 aa13.03□□□□□ -0.32
CHFR-213ENST00000536843 MTCH1Q9NZJ7 389 aa13.03□□□□□ -0.32
CHFR-213ENST00000536843 WDR83OSQ9Y284 106 aa13.03□□□□□ -0.32
CHFR-213ENST00000536843 BMPR1BO00238 502 aa13.02□□□□□ -0.32
CHFR-213ENST00000536843 STAG3L2P0CL84 134 aa13.02□□□□□ -0.32
CHFR-213ENST00000536843 STAG3L3P0CL85 134 aa13.02□□□□□ -0.32
CHFR-213ENST00000536843 ARL14EPLP0DKL9 152 aa13.02□□□□□ -0.32
CHFR-213ENST00000536843 ZNF718Q3SXZ3 478 aa13.02□□□□□ -0.32
CHFR-213ENST00000536843 C6orf15Q6UXA7 325 aaPredicted RBP13.02□□□□□ -0.32
CHFR-213ENST00000536843 FGF23Q9GZV9 251 aaPredicted RBP13.02□□□□□ -0.32
CHFR-213ENST00000536843 DEPPQ9NTK1 212 aa13.02□□□□□ -0.32
CHFR-213ENST00000536843 TMEM38BQ9NVV0 291 aa13.02□□□□□ -0.32
CHFR-213ENST00000536843 ZNF716A6NP11 495 aa13.02□□□□□ -0.33
CHFR-213ENST00000536843 DNPH1O43598 174 aa13.02□□□□□ -0.33
CHFR-213ENST00000536843 TOX4O94842 621 aa13.02□□□□□ -0.33
CHFR-213ENST00000536843 CXorf1O96002 111 aa13.02□□□□□ -0.33
CHFR-213ENST00000536843 OR10J4P0C629 311 aa13.02□□□□□ -0.33
CHFR-213ENST00000536843 IGLL1P15814 213 aa13.02□□□□□ -0.33
CHFR-213ENST00000536843 ACP1P24666 158 aa13.02□□□□□ -0.33
CHFR-213ENST00000536843 CD1BP29016 333 aa13.02□□□□□ -0.33
CHFR-213ENST00000536843 SRIP30626 198 aa13.02□□□□□ -0.33
CHFR-213ENST00000536843 LCN12Q6JVE5 192 aa13.02□□□□□ -0.33
CHFR-213ENST00000536843 AAED1Q7RTV5 226 aa13.02□□□□□ -0.33
CHFR-213ENST00000536843 FAM19A2Q8N3H0 131 aa13.02□□□□□ -0.33
CHFR-213ENST00000536843 EAF1Q96JC9 268 aaPredicted RBP13.02□□□□□ -0.33
CHFR-213ENST00000536843 FREM2Q5SZK8 3169 aa13.01□□□□□ -0.33
CHFR-213ENST00000536843 PINLYPA6NC86 204 aa13.01□□□□□ -0.33
CHFR-213ENST00000536843 TRAPPC2LH3BP13 241 aa13.01□□□□□ -0.33
CHFR-213ENST00000536843 B4GALT1P15291 398 aa13.01□□□□□ -0.33
CHFR-213ENST00000536843 RPL31P62899 125 aaKnown RBP13.01□□□□□ -0.33
CHFR-213ENST00000536843 KIAA1644Q3SXP7 199 aa13.01□□□□□ -0.33
CHFR-213ENST00000536843 PRR27Q6MZM9 219 aa13.01□□□□□ -0.33
CHFR-213ENST00000536843 ZNF439Q8NDP4 499 aa13.01□□□□□ -0.33
CHFR-213ENST00000536843 OR10D3Q8NH80 312 aa13.01□□□□□ -0.33
CHFR-213ENST00000536843 IL1F10Q8WWZ1 152 aa13.01□□□□□ -0.33
CHFR-213ENST00000536843 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.01□□□□□ -0.33
CHFR-213ENST00000536843 KCNS2Q9ULS6 477 aa13.01□□□□□ -0.33
CHFR-213ENST00000536843 TRGV10A0A0A0MS01 117 aa13.01□□□□□ -0.33
CHFR-213ENST00000536843 ZG16O60844 167 aa13.01□□□□□ -0.33
CHFR-213ENST00000536843 HLA-DQA1P01909 254 aa13.01□□□□□ -0.33
CHFR-213ENST00000536843 S100A7P31151 101 aa13.01□□□□□ -0.33
CHFR-213ENST00000536843 SELENOVP59797 346 aa13.01□□□□□ -0.33
CHFR-213ENST00000536843 TBR1Q16650 682 aa13.01□□□□□ -0.33
CHFR-213ENST00000536843 OR4A47Q6IF82 309 aa13.01□□□□□ -0.33
CHFR-213ENST00000536843 BCL2L2Q92843 193 aaPredicted RBP13.01□□□□□ -0.33
CHFR-213ENST00000536843 OR2H1Q9GZK4 316 aa13.01□□□□□ -0.33
CHFR-213ENST00000536843 MKXQ8IYA7 352 aa13□□□□□ -0.33
CHFR-213ENST00000536843 FAM58AQ8N1B3 248 aa13□□□□□ -0.33
CHFR-213ENST00000536843 DRAM1Q8N682 238 aa13□□□□□ -0.33
CHFR-213ENST00000536843 YTHDF2Q9Y5A9 579 aaKnown RBP13□□□□□ -0.33
CHFR-213ENST00000536843 NCKAP5O14513 1909 aa13□□□□□ -0.33
CHFR-213ENST00000536843 ODAMA1E959 279 aa13□□□□□ -0.33
CHFR-213ENST00000536843 J3QR06 171 aa13□□□□□ -0.33
CHFR-213ENST00000536843 GPM6AP51674 278 aa13□□□□□ -0.33
CHFR-213ENST00000536843 CLDN18P56856 261 aa13□□□□□ -0.33
CHFR-213ENST00000536843 SCCPDHQ8NBX0 429 aa13□□□□□ -0.33
CHFR-213ENST00000536843 FGFBP3Q8TAT2 258 aa13□□□□□ -0.33
CHFR-213ENST00000536843 CPT1CQ8TCG5 803 aa13□□□□□ -0.33
CHFR-213ENST00000536843 C1QTNF5Q9BXJ0 243 aa13□□□□□ -0.33
CHFR-213ENST00000536843 RPH3ALQ9UNE2 315 aa13□□□□□ -0.33
CHFR-213ENST00000536843 TRAV24A0A0B4J272 114 aa12.99□□□□□ -0.33
CHFR-213ENST00000536843 AMY1AP04745 511 aa12.99□□□□□ -0.33
CHFR-213ENST00000536843 NTF3P20783 257 aa12.99□□□□□ -0.33
CHFR-213ENST00000536843 EDDM3BP56851 147 aa12.99□□□□□ -0.33
CHFR-213ENST00000536843 DEFB125Q8N687 156 aa12.99□□□□□ -0.33
CHFR-213ENST00000536843 OR8B3Q8NGG8 313 aa12.99□□□□□ -0.33
CHFR-213ENST00000536843 ZNF596Q8TC21 504 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms