RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 ADAD2Q8NCV1 583 aaKnown RBP10.16□□□□□ -0.78
PRKDC-206ENST00000536429 OR6F1Q8NGZ6 308 aa10.16□□□□□ -0.78
PRKDC-206ENST00000536429 TMEM167AQ8TBQ9 72 aa10.16□□□□□ -0.78
PRKDC-206ENST00000536429 DCUN1D4Q92564 292 aa10.16□□□□□ -0.78
PRKDC-206ENST00000536429 ISOC1Q96CN7 298 aa10.16□□□□□ -0.78
PRKDC-206ENST00000536429 OR2A7Q96R45 310 aa10.16□□□□□ -0.78
PRKDC-206ENST00000536429 TINAGL1Q9GZM7 467 aaPredicted RBP10.16□□□□□ -0.78
PRKDC-206ENST00000536429 COA4Q9NYJ1 87 aa10.16□□□□□ -0.78
PRKDC-206ENST00000536429 CCDC59Q9P031 241 aaKnown RBP10.16□□□□□ -0.78
PRKDC-206ENST00000536429 CEPT1Q9Y6K0 416 aa10.16□□□□□ -0.78
PRKDC-206ENST00000536429 H3BUA1 57 aa10.15□□□□□ -0.78
PRKDC-206ENST00000536429 RBFOX2O43251 390 aaKnown RBP eCLIP10.15□□□□□ -0.78
PRKDC-206ENST00000536429 IL6RP08887 468 aaPredicted RBP10.15□□□□□ -0.78
PRKDC-206ENST00000536429 OR8U8P0C7N1 319 aa10.15□□□□□ -0.78
PRKDC-206ENST00000536429 DGCR2P98153 550 aa10.15□□□□□ -0.78
PRKDC-206ENST00000536429 ZNF45Q02386 682 aa10.15□□□□□ -0.78
PRKDC-206ENST00000536429 PHLDA2Q53GA4 152 aa10.15□□□□□ -0.78
PRKDC-206ENST00000536429 VAX1Q5SQQ9 334 aa10.15□□□□□ -0.78
PRKDC-206ENST00000536429 OR4A47Q6IF82 309 aa10.15□□□□□ -0.78
PRKDC-206ENST00000536429 MRAPQ8TCY5 172 aa10.15□□□□□ -0.78
PRKDC-206ENST00000536429 DLX4Q92988 240 aaPredicted RBP10.15□□□□□ -0.78
PRKDC-206ENST00000536429 TMEM68Q96MH6 324 aa10.15□□□□□ -0.78
PRKDC-206ENST00000536429 BCL7BQ9BQE9 202 aa10.15□□□□□ -0.78
PRKDC-206ENST00000536429 MCRIP2Q9BUT9 160 aaKnown RBP10.15□□□□□ -0.78
PRKDC-206ENST00000536429 SLA2Q9H6Q3 261 aa10.15□□□□□ -0.78
PRKDC-206ENST00000536429 SCOCQ9UIL1 159 aa10.15□□□□□ -0.78
PRKDC-206ENST00000536429 CGB1A6NKQ9 187 aa10.14□□□□□ -0.79
PRKDC-206ENST00000536429 SEC14L6B5MCN3 397 aa10.14□□□□□ -0.79
PRKDC-206ENST00000536429 LINC01619G3V211 115 aa10.14□□□□□ -0.79
PRKDC-206ENST00000536429 GPR31O00270 319 aa10.14□□□□□ -0.79
PRKDC-206ENST00000536429 ACTL6BO94805 426 aa10.14□□□□□ -0.79
PRKDC-206ENST00000536429 HRASP01112 189 aa10.14□□□□□ -0.79
PRKDC-206ENST00000536429 TRBV12-3P01733 135 aa10.14□□□□□ -0.79
PRKDC-206ENST00000536429 CD3DP04234 171 aa10.14□□□□□ -0.79
PRKDC-206ENST00000536429 OR9G9P0C7N8 305 aa10.14□□□□□ -0.79
PRKDC-206ENST00000536429 CD40LGP29965 261 aa10.14□□□□□ -0.79
PRKDC-206ENST00000536429 TSPAN5P62079 268 aa10.14□□□□□ -0.79
PRKDC-206ENST00000536429 CATR1Q13166 79 aa10.14□□□□□ -0.79
PRKDC-206ENST00000536429 REC114Q7Z4M0 266 aa10.14□□□□□ -0.79
PRKDC-206ENST00000536429 OR4D10Q8NGI6 311 aa10.14□□□□□ -0.79
PRKDC-206ENST00000536429 DPF1Q92782 380 aa10.14□□□□□ -0.79
PRKDC-206ENST00000536429 SLIRPQ9GZT3 109 aaKnown RBP10.14□□□□□ -0.79
PRKDC-206ENST00000536429 BET1LQ9NYM9 111 aa10.14□□□□□ -0.79
PRKDC-206ENST00000536429 MTFP1Q9UDX5 166 aa10.14□□□□□ -0.79
PRKDC-206ENST00000536429 ANKRD34BA5PLL1 514 aa10.13□□□□□ -0.79
PRKDC-206ENST00000536429 MPPED1O15442 326 aa10.13□□□□□ -0.79
PRKDC-206ENST00000536429 CREBL2O60519 120 aaPredicted RBP10.13□□□□□ -0.79
PRKDC-206ENST00000536429 HPRT1P00492 218 aa10.13□□□□□ -0.79
PRKDC-206ENST00000536429 NQO2P16083 231 aa10.13□□□□□ -0.79
PRKDC-206ENST00000536429 HLA-GP17693 338 aa10.13□□□□□ -0.79
PRKDC-206ENST00000536429 RPL27AP46776 148 aaKnown RBP10.13□□□□□ -0.79
PRKDC-206ENST00000536429 TAS2R31P59538 309 aa10.13□□□□□ -0.79
PRKDC-206ENST00000536429 RPL8P62917 257 aaKnown RBP10.13□□□□□ -0.79
PRKDC-206ENST00000536429 POU2AF1Q16633 256 aa10.13□□□□□ -0.79
PRKDC-206ENST00000536429 ZNF585BQ52M93 769 aa10.13□□□□□ -0.79
PRKDC-206ENST00000536429 TTC9CQ8N5M4 171 aa10.13□□□□□ -0.79
PRKDC-206ENST00000536429 VSTM2AQ8TAG5 236 aa10.13□□□□□ -0.79
PRKDC-206ENST00000536429 FCAMRQ8WWV6 532 aa10.13□□□□□ -0.79
PRKDC-206ENST00000536429 FYTTD1Q96QD9 318 aaKnown RBP10.13□□□□□ -0.79
PRKDC-206ENST00000536429 SPIN2AQ99865 258 aa10.13□□□□□ -0.79
PRKDC-206ENST00000536429 SPIN2BQ9BPZ2 258 aa10.13□□□□□ -0.79
PRKDC-206ENST00000536429 RSRP1Q9BUV0 290 aa10.13□□□□□ -0.79
PRKDC-206ENST00000536429 GPR61Q9BZJ8 451 aa10.13□□□□□ -0.79
PRKDC-206ENST00000536429 C6orf62Q9GZU0 229 aaPredicted RBP10.13□□□□□ -0.79
PRKDC-206ENST00000536429 TMEM140Q9NV12 185 aa10.13□□□□□ -0.79
PRKDC-206ENST00000536429 C13orf42A0A1B0GVH6 325 aa10.12□□□□□ -0.79
PRKDC-206ENST00000536429 UPK2O00526 184 aa10.12□□□□□ -0.79
PRKDC-206ENST00000536429 TPPPO94811 219 aa10.12□□□□□ -0.79
PRKDC-206ENST00000536429 BRI3O95415 125 aa10.12□□□□□ -0.79
PRKDC-206ENST00000536429 HSPB1P04792 205 aaKnown RBP10.12□□□□□ -0.79
PRKDC-206ENST00000536429 ZNF735P0CB33 412 aa10.12□□□□□ -0.79
PRKDC-206ENST00000536429 AREGP15514 252 aa10.12□□□□□ -0.79
PRKDC-206ENST00000536429 F2RP25116 425 aa10.12□□□□□ -0.79
PRKDC-206ENST00000536429 LPAR6P43657 344 aa10.12□□□□□ -0.79
PRKDC-206ENST00000536429 RHOGP84095 191 aa10.12□□□□□ -0.79
PRKDC-206ENST00000536429 C9orf66Q5T8R8 295 aa10.12□□□□□ -0.79
PRKDC-206ENST00000536429 FAAP20Q6NZ36 180 aa10.12□□□□□ -0.79
PRKDC-206ENST00000536429 TBC1D26Q86UD7 250 aa10.12□□□□□ -0.79
PRKDC-206ENST00000536429 LHFPL1Q86WI0 220 aa10.12□□□□□ -0.79
PRKDC-206ENST00000536429 DGCR14Q96DF8 476 aaKnown RBP10.12□□□□□ -0.79
PRKDC-206ENST00000536429 PLEKHA2Q9HB19 425 aa10.12□□□□□ -0.79
PRKDC-206ENST00000536429 HRASLSQ9HDD0 168 aa10.12□□□□□ -0.79
PRKDC-206ENST00000536429 AKIP1Q9NQ31 210 aa10.12□□□□□ -0.79
PRKDC-206ENST00000536429 TRBV9A0A0B4J1U6 114 aa10.11□□□□□ -0.79
PRKDC-206ENST00000536429 A0A0G2JLM5 398 aa10.11□□□□□ -0.79
PRKDC-206ENST00000536429 GABARAPH6UMI1 98 aa10.11□□□□□ -0.79
PRKDC-206ENST00000536429 OVOL1O14753 267 aa10.11□□□□□ -0.79
PRKDC-206ENST00000536429 NOL3O60936 208 aaKnown RBP10.11□□□□□ -0.79
PRKDC-206ENST00000536429 CD74P04233 296 aa10.11□□□□□ -0.79
PRKDC-206ENST00000536429 REG1AP05451 166 aa10.11□□□□□ -0.79
PRKDC-206ENST00000536429 PI3P19957 117 aa10.11□□□□□ -0.79
PRKDC-206ENST00000536429 MAS1LP35410 378 aa10.11□□□□□ -0.79
PRKDC-206ENST00000536429 OR2B8PP59922 312 aa10.11□□□□□ -0.79
PRKDC-206ENST00000536429 RNASE10Q5GAN6 216 aaKnown RBP10.11□□□□□ -0.79
PRKDC-206ENST00000536429 ZNF343Q6P1L6 599 aa10.11□□□□□ -0.79
PRKDC-206ENST00000536429 CMTM1Q8IZ96 169 aa10.11□□□□□ -0.79
PRKDC-206ENST00000536429 TMEM229BQ8NBD8 167 aa10.11□□□□□ -0.79
PRKDC-206ENST00000536429 OR4A5Q8NH83 315 aa10.11□□□□□ -0.79
PRKDC-206ENST00000536429 CD300LFQ8TDQ1 290 aa10.11□□□□□ -0.79
PRKDC-206ENST00000536429 BORCS5Q969J3 196 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms