RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 ETV7Q9Y603 341 aa10.08□□□□□ -0.8
CLSTN3-205ENST00000535452 SMIM30A4D0T7 59 aa10.07□□□□□ -0.8
CLSTN3-205ENST00000535452 BMPR1BO00238 502 aa10.07□□□□□ -0.8
CLSTN3-205ENST00000535452 S100GP29377 79 aa10.07□□□□□ -0.8
CLSTN3-205ENST00000535452 FGF9P31371 208 aaPredicted RBP10.07□□□□□ -0.8
CLSTN3-205ENST00000535452 CBX5P45973 191 aa10.07□□□□□ -0.8
CLSTN3-205ENST00000535452 SCAND1P57086 179 aa10.07□□□□□ -0.8
CLSTN3-205ENST00000535452 HERV-K104P61576 105 aa10.07□□□□□ -0.8
CLSTN3-205ENST00000535452 SSBP2P81877 361 aaPredicted RBP10.07□□□□□ -0.8
CLSTN3-205ENST00000535452 PLA2G7Q13093 441 aa10.07□□□□□ -0.8
CLSTN3-205ENST00000535452 ZNF57Q68EA5 555 aaPredicted RBP10.07□□□□□ -0.8
CLSTN3-205ENST00000535452 SFXN4Q6P4A7 337 aa10.07□□□□□ -0.8
CLSTN3-205ENST00000535452 SSX9Q7RTT3 188 aa10.07□□□□□ -0.8
CLSTN3-205ENST00000535452 SLC38A6Q8IZM9 456 aa10.07□□□□□ -0.8
CLSTN3-205ENST00000535452 MFSD4AQ8N468 514 aa10.07□□□□□ -0.8
CLSTN3-205ENST00000535452 BEST4Q8NFU0 473 aa10.07□□□□□ -0.8
CLSTN3-205ENST00000535452 DMBX1Q8NFW5 382 aa10.07□□□□□ -0.8
CLSTN3-205ENST00000535452 OR52B4Q8NGK2 314 aa10.07□□□□□ -0.8
CLSTN3-205ENST00000535452 TMEM167AQ8TBQ9 72 aa10.07□□□□□ -0.8
CLSTN3-205ENST00000535452 CD300LFQ8TDQ1 290 aa10.07□□□□□ -0.8
CLSTN3-205ENST00000535452 NUDCD2Q8WVJ2 157 aa10.07□□□□□ -0.8
CLSTN3-205ENST00000535452 IFT46Q9NQC8 304 aa10.07□□□□□ -0.8
CLSTN3-205ENST00000535452 SLC2A9Q9NRM0 540 aa10.07□□□□□ -0.8
CLSTN3-205ENST00000535452 TXNL4BQ9NX01 149 aaKnown RBP10.07□□□□□ -0.8
CLSTN3-205ENST00000535452 RHBDL2Q9NX52 303 aa10.07□□□□□ -0.8
CLSTN3-205ENST00000535452 A0A0A6YYH2 397 aa10.06□□□□□ -0.8
CLSTN3-205ENST00000535452 TRBV7-1A0A0A6YYK4 115 aa10.06□□□□□ -0.8
CLSTN3-205ENST00000535452 TRBV9A0A0B4J1U6 114 aa10.06□□□□□ -0.8
CLSTN3-205ENST00000535452 HMX3A6NHT5 357 aa10.06□□□□□ -0.8
CLSTN3-205ENST00000535452 A6NJ64 397 aa10.06□□□□□ -0.8
CLSTN3-205ENST00000535452 LGALS9O00182 355 aa10.06□□□□□ -0.8
CLSTN3-205ENST00000535452 FOLR2P14207 255 aa10.06□□□□□ -0.8
CLSTN3-205ENST00000535452 HLA-GP17693 338 aa10.06□□□□□ -0.8
CLSTN3-205ENST00000535452 FCGR2CP31995 323 aa10.06□□□□□ -0.8
CLSTN3-205ENST00000535452 THOC7Q6I9Y2 204 aaKnown RBP10.06□□□□□ -0.8
CLSTN3-205ENST00000535452 CLEC19AQ6UXS0 136 aa10.06□□□□□ -0.8
CLSTN3-205ENST00000535452 GPHB5Q86YW7 130 aa10.06□□□□□ -0.8
CLSTN3-205ENST00000535452 VKORC1L1Q8N0U8 176 aa10.06□□□□□ -0.8
CLSTN3-205ENST00000535452 SPAG16Q8N0X2 631 aa10.06□□□□□ -0.8
CLSTN3-205ENST00000535452 OR13F1Q8NGS4 319 aa10.06□□□□□ -0.8
CLSTN3-205ENST00000535452 LGALS14Q8TCE9 139 aa10.06□□□□□ -0.8
CLSTN3-205ENST00000535452 MARC2Q969Z3 335 aa10.06□□□□□ -0.8
CLSTN3-205ENST00000535452 SRD5A3Q9H8P0 318 aa10.06□□□□□ -0.8
CLSTN3-205ENST00000535452 EDA2RQ9HAV5 297 aa10.06□□□□□ -0.8
CLSTN3-205ENST00000535452 C2orf70A6NJV1 201 aa10.05□□□□□ -0.8
CLSTN3-205ENST00000535452 PPP5D1E7EU14 171 aa10.05□□□□□ -0.8
CLSTN3-205ENST00000535452 TMEM127O75204 238 aa10.05□□□□□ -0.8
CLSTN3-205ENST00000535452 OR2C1O95371 312 aa10.05□□□□□ -0.8
CLSTN3-205ENST00000535452 MYOD1P15172 320 aa10.05□□□□□ -0.8
CLSTN3-205ENST00000535452 PSMB6P28072 239 aa10.05□□□□□ -0.8
CLSTN3-205ENST00000535452 TAS2R31P59538 309 aa10.05□□□□□ -0.8
CLSTN3-205ENST00000535452 FXYD4P59646 89 aa10.05□□□□□ -0.8
CLSTN3-205ENST00000535452 MXD1Q05195 221 aa10.05□□□□□ -0.8
CLSTN3-205ENST00000535452 MSMO1Q15800 293 aa10.05□□□□□ -0.8
CLSTN3-205ENST00000535452 DEFB114Q30KQ6 69 aa10.05□□□□□ -0.8
CLSTN3-205ENST00000535452 TIMM50Q3ZCQ8 353 aa10.05□□□□□ -0.8
CLSTN3-205ENST00000535452 C10orf55Q5SWW7 151 aa10.05□□□□□ -0.8
CLSTN3-205ENST00000535452 IDNKQ5T6J7 187 aa10.05□□□□□ -0.8
CLSTN3-205ENST00000535452 UBE2UQ5VVX9 321 aa10.05□□□□□ -0.8
CLSTN3-205ENST00000535452 PLET1Q6UQ28 207 aa10.05□□□□□ -0.8
CLSTN3-205ENST00000535452 IL34Q6ZMJ4 242 aa10.05□□□□□ -0.8
CLSTN3-205ENST00000535452 HSD17B13Q7Z5P4 300 aaPredicted RBP10.05□□□□□ -0.8
CLSTN3-205ENST00000535452 CROCCP3Q8IVE0 287 aa10.05□□□□□ -0.8
CLSTN3-205ENST00000535452 YTHDF1Q9BYJ9 559 aaKnown RBP10.05□□□□□ -0.8
CLSTN3-205ENST00000535452 SLC5A7Q9GZV3 580 aa10.05□□□□□ -0.8
CLSTN3-205ENST00000535452 VCX3AQ9NNX9 186 aa10.05□□□□□ -0.8
CLSTN3-205ENST00000535452 UFC1Q9Y3C8 167 aa10.05□□□□□ -0.8
CLSTN3-205ENST00000535452 TRAV18A0A075B6X5 111 aa10.04□□□□□ -0.8
CLSTN3-205ENST00000535452 IGKV1D-8A0A087WSZ0 117 aa10.04□□□□□ -0.8
CLSTN3-205ENST00000535452 LOC100506127A0A0U1RQW1 187 aa10.04□□□□□ -0.8
CLSTN3-205ENST00000535452 TNFSF12O43508 249 aa10.04□□□□□ -0.8
CLSTN3-205ENST00000535452 HPRT1P00492 218 aa10.04□□□□□ -0.8
CLSTN3-205ENST00000535452 SNRPBP14678 240 aaKnown RBP10.04□□□□□ -0.8
CLSTN3-205ENST00000535452 NQO2P16083 231 aa10.04□□□□□ -0.8
CLSTN3-205ENST00000535452 CBLN1P23435 193 aa10.04□□□□□ -0.8
CLSTN3-205ENST00000535452 AADACL3Q5VUY0 350 aa10.04□□□□□ -0.8
CLSTN3-205ENST00000535452 LAMTOR1Q6IAA8 161 aa10.04□□□□□ -0.8
CLSTN3-205ENST00000535452 C5orf30Q96GV9 206 aa10.04□□□□□ -0.8
CLSTN3-205ENST00000535452 SRSF8Q9BRL6 282 aaKnown RBP10.04□□□□□ -0.8
CLSTN3-205ENST00000535452 BET1LQ9NYM9 111 aa10.04□□□□□ -0.8
CLSTN3-205ENST00000535452 ADAM30Q9UKF2 790 aa10.04□□□□□ -0.8
CLSTN3-205ENST00000535452 RBFOX2O43251 390 aaKnown RBP eCLIP10.03□□□□□ -0.82e-6■■■■□ 25.7
CLSTN3-205ENST00000535452 PPYP01298 95 aa10.03□□□□□ -0.8
CLSTN3-205ENST00000535452 IGHV3-23P01764 117 aa10.03□□□□□ -0.8
CLSTN3-205ENST00000535452 ZNF735P0CB33 412 aa10.03□□□□□ -0.8
CLSTN3-205ENST00000535452 RPL30P62888 115 aaKnown RBP10.03□□□□□ -0.8
CLSTN3-205ENST00000535452 ZNF45Q02386 682 aa10.03□□□□□ -0.8
CLSTN3-205ENST00000535452 TMEM17Q86X19 198 aa10.03□□□□□ -0.8
CLSTN3-205ENST00000535452 CMTM1Q8IZ96 169 aa10.03□□□□□ -0.8
CLSTN3-205ENST00000535452 DEFB125Q8N687 156 aa10.03□□□□□ -0.8
CLSTN3-205ENST00000535452 OR1L6Q8NGR2 347 aa10.03□□□□□ -0.8
CLSTN3-205ENST00000535452 S100A16Q96FQ6 103 aaKnown RBP10.03□□□□□ -0.8
CLSTN3-205ENST00000535452 C6orf62Q9GZU0 229 aaPredicted RBP10.03□□□□□ -0.8
CLSTN3-205ENST00000535452 KMT2CQ8NEZ4 4911 aaKnown RBP10.03□□□□□ -0.8
CLSTN3-205ENST00000535452 LOC102724200A0A096LPH7 203 aaPredicted RBP10.02□□□□□ -0.81
CLSTN3-205ENST00000535452 TRAV25A0A0B4J276 109 aa10.02□□□□□ -0.81
CLSTN3-205ENST00000535452 IZUMO1RA6ND01 250 aa10.02□□□□□ -0.81
CLSTN3-205ENST00000535452 SULT1C2O00338 296 aa10.02□□□□□ -0.81
CLSTN3-205ENST00000535452 SNAPC5O75971 98 aa10.02□□□□□ -0.81
CLSTN3-205ENST00000535452 HLA-AP01891 365 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms