RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 CFDP00746 253 aaPredicted RBP16.4■□□□□ 0.22
TNFRSF1A-205ENST00000534885 MSMBP08118 114 aa16.4■□□□□ 0.22
TNFRSF1A-205ENST00000534885 SAA1P0DJI8 122 aaPredicted RBP16.4■□□□□ 0.22
TNFRSF1A-205ENST00000534885 IAPPP10997 89 aa16.4■□□□□ 0.22
TNFRSF1A-205ENST00000534885 UBE2KP61086 200 aa16.4■□□□□ 0.22
TNFRSF1A-205ENST00000534885 MBD6Q96DN6 1003 aa16.4■□□□□ 0.22
TNFRSF1A-205ENST00000534885 RITA1Q96K30 269 aa16.4■□□□□ 0.22
TNFRSF1A-205ENST00000534885 FAM24AA6NFZ4 105 aa16.39■□□□□ 0.21
TNFRSF1A-205ENST00000534885 BCL2L11O43521 198 aa16.39■□□□□ 0.21
TNFRSF1A-205ENST00000534885 CAV2P51636 162 aa16.39■□□□□ 0.21
TNFRSF1A-205ENST00000534885 RAB14P61106 215 aa16.39■□□□□ 0.21
TNFRSF1A-205ENST00000534885 RPS16P62249 146 aaKnown RBP16.39■□□□□ 0.21
TNFRSF1A-205ENST00000534885 VAMP2P63027 116 aa16.39■□□□□ 0.21
TNFRSF1A-205ENST00000534885 SPINK9Q5DT21 86 aa16.39■□□□□ 0.21
TNFRSF1A-205ENST00000534885 MAPK1IP1LQ8NDC0 245 aa16.39■□□□□ 0.21
TNFRSF1A-205ENST00000534885 OR4A16Q8NH70 328 aa16.39■□□□□ 0.21
TNFRSF1A-205ENST00000534885 RBKSQ9H477 322 aa16.39■□□□□ 0.21
TNFRSF1A-205ENST00000534885 ZC4H2Q9NQZ6 224 aa16.39■□□□□ 0.21
TNFRSF1A-205ENST00000534885 UNC79Q9P2D8 2635 aa16.39■□□□□ 0.21
TNFRSF1A-205ENST00000534885 H3BP45 60 aa16.39■□□□□ 0.21
TNFRSF1A-205ENST00000534885 CEACAM3P40198 252 aa16.39■□□□□ 0.21
TNFRSF1A-205ENST00000534885 COMMD7Q86VX2 200 aa16.39■□□□□ 0.21
TNFRSF1A-205ENST00000534885 OR2C3Q8N628 320 aa16.39■□□□□ 0.21
TNFRSF1A-205ENST00000534885 ZDHHC16Q969W1 377 aa16.39■□□□□ 0.21
TNFRSF1A-205ENST00000534885 MS4A7Q9GZW8 240 aaPredicted RBP16.39■□□□□ 0.21
TNFRSF1A-205ENST00000534885 LYRM2Q9NU23 88 aaPredicted RBP16.39■□□□□ 0.21
TNFRSF1A-205ENST00000534885 KANTRA0A1W2PQU2 76 aa16.38■□□□□ 0.21
TNFRSF1A-205ENST00000534885 TIMM23O14925 209 aa16.38■□□□□ 0.21
TNFRSF1A-205ENST00000534885 IL6RP08887 468 aaPredicted RBP16.38■□□□□ 0.21
TNFRSF1A-205ENST00000534885 UBE2E1P51965 193 aa16.38■□□□□ 0.21
TNFRSF1A-205ENST00000534885 SSX2Q16385 188 aa16.38■□□□□ 0.21
TNFRSF1A-205ENST00000534885 AARDQ4LEZ3 155 aa16.38■□□□□ 0.21
TNFRSF1A-205ENST00000534885 KRTAP1-3Q8IUG1 177 aa16.38■□□□□ 0.21
TNFRSF1A-205ENST00000534885 BSCL2Q96G97 398 aaPredicted RBP16.38■□□□□ 0.21
TNFRSF1A-205ENST00000534885 RAB40CQ96S21 281 aa16.38■□□□□ 0.21
TNFRSF1A-205ENST00000534885 IGSF23A1L1A6 192 aa16.38■□□□□ 0.21
TNFRSF1A-205ENST00000534885 C15orf61A6NNL5 157 aa16.38■□□□□ 0.21
TNFRSF1A-205ENST00000534885 B4DSR2 109 aa16.38■□□□□ 0.21
TNFRSF1A-205ENST00000534885 RNF223E7ERA6 249 aa16.38■□□□□ 0.21
TNFRSF1A-205ENST00000534885 ARHGDIBP52566 201 aa16.38■□□□□ 0.21
TNFRSF1A-205ENST00000534885 NHLH2Q02577 135 aa16.38■□□□□ 0.21
TNFRSF1A-205ENST00000534885 DYNAPQ8N1N2 210 aa16.38■□□□□ 0.21
TNFRSF1A-205ENST00000534885 ITPR2Q14571 2701 aa16.37■□□□□ 0.21
TNFRSF1A-205ENST00000534885 GPR137BO60478 399 aa16.37■□□□□ 0.21
TNFRSF1A-205ENST00000534885 IGLV2-23P01705 113 aa16.37■□□□□ 0.21
TNFRSF1A-205ENST00000534885 LGALS4P56470 323 aa16.37■□□□□ 0.21
TNFRSF1A-205ENST00000534885 PUSL1Q8N0Z8 303 aaKnown RBP16.37■□□□□ 0.21
TNFRSF1A-205ENST00000534885 CR1P17927 2039 aa16.37■□□□□ 0.21
TNFRSF1A-205ENST00000534885 ZANQ9Y493 2812 aa16.37■□□□□ 0.21
TNFRSF1A-205ENST00000534885 IFNA17P01571 189 aa16.36■□□□□ 0.21
TNFRSF1A-205ENST00000534885 MYOD1P15172 320 aa16.36■□□□□ 0.21
TNFRSF1A-205ENST00000534885 GPR157Q5UAW9 335 aa16.36■□□□□ 0.21
TNFRSF1A-205ENST00000534885 TMEM252Q8N6L7 170 aa16.36■□□□□ 0.21
TNFRSF1A-205ENST00000534885 PCNPQ8WW12 178 aaKnown RBP16.36■□□□□ 0.21
TNFRSF1A-205ENST00000534885 AIFM2Q9BRQ8 373 aa16.36■□□□□ 0.21
TNFRSF1A-205ENST00000534885 TMEM14BQ9NUH8 114 aa16.36■□□□□ 0.21
TNFRSF1A-205ENST00000534885 BET1LQ9NYM9 111 aa16.36■□□□□ 0.21
TNFRSF1A-205ENST00000534885 WSB1Q9Y6I7 421 aa16.36■□□□□ 0.21
TNFRSF1A-205ENST00000534885 HECTD1Q9ULT8 2610 aa16.36■□□□□ 0.21
TNFRSF1A-205ENST00000534885 CENPVL3A0A0U1RRI6 287 aa16.36■□□□□ 0.21
TNFRSF1A-205ENST00000534885 I3L521 148 aa16.36■□□□□ 0.21
TNFRSF1A-205ENST00000534885 SPDEFO95238 335 aa16.36■□□□□ 0.21
TNFRSF1A-205ENST00000534885 M6PRP20645 277 aa16.36■□□□□ 0.21
TNFRSF1A-205ENST00000534885 EWSR1Q01844 656 aaKnown RBP eCLIP16.36■□□□□ 0.21
TNFRSF1A-205ENST00000534885 MINOS1Q5TGZ0 78 aa16.36■□□□□ 0.21
TNFRSF1A-205ENST00000534885 ZNF429Q86V71 674 aa16.36■□□□□ 0.21
TNFRSF1A-205ENST00000534885 CFHR4Q92496 578 aa16.36■□□□□ 0.21
TNFRSF1A-205ENST00000534885 ZNF471Q9BX82 626 aaPredicted RBP16.36■□□□□ 0.21
TNFRSF1A-205ENST00000534885 SMIM3Q9BZL3 60 aa16.36■□□□□ 0.21
TNFRSF1A-205ENST00000534885 HIF1ANQ9NWT6 349 aa16.36■□□□□ 0.21
TNFRSF1A-205ENST00000534885 FBXL17Q9UF56 701 aa16.36■□□□□ 0.21
TNFRSF1A-205ENST00000534885 MINOS1-NBL1R4GNA1 71 aa16.36■□□□□ 0.21
TNFRSF1A-205ENST00000534885 PDZD2O15018 2839 aa16.35■□□□□ 0.21
TNFRSF1A-205ENST00000534885 UPK2O00526 184 aa16.35■□□□□ 0.21
TNFRSF1A-205ENST00000534885 CNTFRP26992 372 aa16.35■□□□□ 0.21
TNFRSF1A-205ENST00000534885 SAA4P35542 130 aa16.35■□□□□ 0.21
TNFRSF1A-205ENST00000534885 RPL23AP62750 156 aaKnown RBP16.35■□□□□ 0.21
TNFRSF1A-205ENST00000534885 AANATQ16613 207 aa16.35■□□□□ 0.21
TNFRSF1A-205ENST00000534885 SLC51BQ86UW2 128 aa16.35■□□□□ 0.21
TNFRSF1A-205ENST00000534885 LRRC20Q8TCA0 184 aa16.35■□□□□ 0.21
TNFRSF1A-205ENST00000534885 DTD1Q8TEA8 209 aa16.35■□□□□ 0.21
TNFRSF1A-205ENST00000534885 C1orf159Q96HA4 380 aa16.35■□□□□ 0.21
TNFRSF1A-205ENST00000534885 AJUBAQ96IF1 538 aa16.35■□□□□ 0.21
TNFRSF1A-205ENST00000534885 Q96MF0 132 aa16.35■□□□□ 0.21
TNFRSF1A-205ENST00000534885 REG4Q9BYZ8 158 aa16.35■□□□□ 0.21
TNFRSF1A-205ENST00000534885 CYTL1Q9NRR1 136 aa16.35■□□□□ 0.21
TNFRSF1A-205ENST00000534885 PSENENQ9NZ42 101 aa16.35■□□□□ 0.21
TNFRSF1A-205ENST00000534885 FOXA2Q9Y261 457 aaPredicted RBP16.35■□□□□ 0.21
TNFRSF1A-205ENST00000534885 PRRC2AP48634 2157 aaKnown RBP16.35■□□□□ 0.21
TNFRSF1A-205ENST00000534885 CEBPZOSA8MTT3 80 aa16.34■□□□□ 0.21
TNFRSF1A-205ENST00000534885 MED6O75586 246 aa16.34■□□□□ 0.21
TNFRSF1A-205ENST00000534885 KBTBD11O94819 623 aa16.34■□□□□ 0.21
TNFRSF1A-205ENST00000534885 CD24P25063 80 aa16.34■□□□□ 0.21
TNFRSF1A-205ENST00000534885 LOXL1Q08397 574 aaPredicted RBP16.34■□□□□ 0.21
TNFRSF1A-205ENST00000534885 PIP4P2Q8N4L2 257 aa16.34■□□□□ 0.21
TNFRSF1A-205ENST00000534885 SMIM8Q96KF7 97 aa16.34■□□□□ 0.21
TNFRSF1A-205ENST00000534885 PLXNB1O43157 2135 aa16.34■□□□□ 0.21
TNFRSF1A-205ENST00000534885 IGHV3OR16-10A0A075B7F0 116 aa16.34■□□□□ 0.21
TNFRSF1A-205ENST00000534885 SLC25A17O43808 307 aa16.34■□□□□ 0.21
TNFRSF1A-205ENST00000534885 CST7O76096 145 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms