RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 SPACA1Q9HBV2 294 aa-0.75□□□□□ -2.53
COPB1-212ENST00000534771 DMAC2Q9NW81 257 aa-0.75□□□□□ -2.53
COPB1-212ENST00000534771 MRPL22Q9NWU5 206 aaKnown RBP-0.75□□□□□ -2.53
COPB1-212ENST00000534771 CD300AQ9UGN4 299 aa-0.75□□□□□ -2.53
COPB1-212ENST00000534771 SNX10Q9Y5X0 201 aa-0.75□□□□□ -2.53
COPB1-212ENST00000534771 TTC21AQ8NDW8 1320 aa-0.75□□□□□ -2.53
COPB1-212ENST00000534771 ABCC12Q96J65 1359 aa-0.75□□□□□ -2.53
COPB1-212ENST00000534771 CEP192Q8TEP8 1941 aa-0.76□□□□□ -2.53
COPB1-212ENST00000534771 MUC4Q99102 2169 aa-0.76□□□□□ -2.53
COPB1-212ENST00000534771 ASXL3Q9C0F0 2248 aa-0.76□□□□□ -2.53
COPB1-212ENST00000534771 COL6A5A8TX70 2615 aa-0.76□□□□□ -2.53
COPB1-212ENST00000534771 TRAV25A0A0B4J276 109 aa-0.76□□□□□ -2.53
COPB1-212ENST00000534771 NUPR2A6NF83 97 aa-0.76□□□□□ -2.53
COPB1-212ENST00000534771 OR6C6A6NF89 314 aa-0.76□□□□□ -2.53
COPB1-212ENST00000534771 K7EN84 100 aa-0.76□□□□□ -2.53
COPB1-212ENST00000534771 REG1AP05451 166 aa-0.76□□□□□ -2.53
COPB1-212ENST00000534771 PTMAP06454 111 aaKnown RBP-0.76□□□□□ -2.53
COPB1-212ENST00000534771 TFPTP0C1Z6 253 aa-0.76□□□□□ -2.53
COPB1-212ENST00000534771 SRMP19623 302 aa-0.76□□□□□ -2.53
COPB1-212ENST00000534771 CALRP27797 417 aaKnown RBP-0.76□□□□□ -2.53
COPB1-212ENST00000534771 HSPA9P38646 679 aaKnown RBP-0.76□□□□□ -2.53
COPB1-212ENST00000534771 FXYD2P54710 66 aa-0.76□□□□□ -2.53
COPB1-212ENST00000534771 CNBPP62633 177 aaKnown RBP-0.76□□□□□ -2.53
COPB1-212ENST00000534771 HMGN5P82970 282 aaKnown RBP-0.76□□□□□ -2.53
COPB1-212ENST00000534771 KCNJ8Q15842 424 aa-0.76□□□□□ -2.53
COPB1-212ENST00000534771 PHF13Q86YI8 300 aaPredicted RBP-0.76□□□□□ -2.53
COPB1-212ENST00000534771 OFCC1Q8IZS5 231 aa-0.76□□□□□ -2.53
COPB1-212ENST00000534771 PACRGLQ8N7B6 248 aa-0.76□□□□□ -2.53
COPB1-212ENST00000534771 TOP1MTQ969P6 601 aa-0.76□□□□□ -2.53
COPB1-212ENST00000534771 ITFG2Q969R8 447 aa-0.76□□□□□ -2.53
COPB1-212ENST00000534771 CCDC77Q9BR77 488 aa-0.76□□□□□ -2.53
COPB1-212ENST00000534771 GNB1LQ9BYB4 327 aa-0.76□□□□□ -2.53
COPB1-212ENST00000534771 C8orf33Q9H7E9 229 aaPredicted RBP-0.76□□□□□ -2.53
COPB1-212ENST00000534771 AUNIPQ9H7T9 357 aa-0.76□□□□□ -2.53
COPB1-212ENST00000534771 TAS2R13Q9NYV9 303 aa-0.76□□□□□ -2.53
COPB1-212ENST00000534771 TIMM22Q9Y584 194 aa-0.76□□□□□ -2.53
COPB1-212ENST00000534771 V9GYY9 64 aa-0.76□□□□□ -2.53
COPB1-212ENST00000534771 CHD6Q8TD26 2715 aa-0.77□□□□□ -2.53
COPB1-212ENST00000534771 FLNBO75369 2602 aaKnown RBP-0.77□□□□□ -2.53
COPB1-212ENST00000534771 ATAD2BQ9ULI0 1458 aa-0.77□□□□□ -2.53
COPB1-212ENST00000534771 PHLPP2Q6ZVD8 1323 aa-0.77□□□□□ -2.53
COPB1-212ENST00000534771 ZNF736B4DX44 427 aaPredicted RBP-0.77□□□□□ -2.53
COPB1-212ENST00000534771 POLR3GO15318 223 aaPredicted RBP-0.77□□□□□ -2.53
COPB1-212ENST00000534771 ERLIN1O75477 346 aa-0.77□□□□□ -2.53
COPB1-212ENST00000534771 CLPSP04118 112 aa-0.77□□□□□ -2.53
COPB1-212ENST00000534771 CCL4P13236 92 aa-0.77□□□□□ -2.53
COPB1-212ENST00000534771 NFYAP23511 347 aaPredicted RBP-0.77□□□□□ -2.53
COPB1-212ENST00000534771 RPS5P46782 204 aaKnown RBP-0.77□□□□□ -2.53
COPB1-212ENST00000534771 HAAOP46952 286 aa-0.77□□□□□ -2.53
COPB1-212ENST00000534771 FKBP1AP62942 108 aaKnown RBP-0.77□□□□□ -2.53
COPB1-212ENST00000534771 HERVK_113P63121 156 aa-0.77□□□□□ -2.53
COPB1-212ENST00000534771 TRAM1Q15629 374 aa-0.77□□□□□ -2.53
COPB1-212ENST00000534771 IBA57Q5T440 356 aaKnown RBP-0.77□□□□□ -2.53
COPB1-212ENST00000534771 ZNF550Q7Z398 422 aa-0.77□□□□□ -2.53
COPB1-212ENST00000534771 LYG2Q86SG7 212 aa-0.77□□□□□ -2.53
COPB1-212ENST00000534771 SPATA24Q86W54 205 aa-0.77□□□□□ -2.53
COPB1-212ENST00000534771 PRR15Q8IV56 129 aa-0.77□□□□□ -2.53
COPB1-212ENST00000534771 FAM9BQ8IZU0 186 aa-0.77□□□□□ -2.53
COPB1-212ENST00000534771 ZNF676Q8N7Q3 588 aa-0.77□□□□□ -2.53
COPB1-212ENST00000534771 CCDC148Q8NFR7 591 aa-0.77□□□□□ -2.53
COPB1-212ENST00000534771 OR4D11Q8NGI4 311 aa-0.77□□□□□ -2.53
COPB1-212ENST00000534771 OR6K2Q8NGY2 324 aa-0.77□□□□□ -2.53
COPB1-212ENST00000534771 TMEM239Q8WW34 195 aa-0.77□□□□□ -2.53
COPB1-212ENST00000534771 ACY3Q96HD9 319 aa-0.77□□□□□ -2.53
COPB1-212ENST00000534771 CIB1Q99828 191 aa-0.77□□□□□ -2.53
COPB1-212ENST00000534771 COPS4Q9BT78 406 aa-0.77□□□□□ -2.53
COPB1-212ENST00000534771 XAGE1AQ9HD64 81 aa-0.77□□□□□ -2.53
COPB1-212ENST00000534771 TAS2R4Q9NYW5 299 aa-0.77□□□□□ -2.53
COPB1-212ENST00000534771 AHSPQ9NZD4 102 aa-0.77□□□□□ -2.53
COPB1-212ENST00000534771 TMEM14CQ9P0S9 112 aa-0.77□□□□□ -2.53
COPB1-212ENST00000534771 DOCK3Q8IZD9 2030 aa-0.77□□□□□ -2.53
COPB1-212ENST00000534771 PRRC2CQ9Y520 2896 aaKnown RBP-0.78□□□□□ -2.53
COPB1-212ENST00000534771 NEURL4Q96JN8 1562 aa-0.78□□□□□ -2.53
COPB1-212ENST00000534771 A0A1B0GX12 115 aa-0.78□□□□□ -2.53
COPB1-212ENST00000534771 CCDC160A6NGH7 325 aa-0.78□□□□□ -2.53
COPB1-212ENST00000534771 C9JCJ5 164 aa-0.78□□□□□ -2.53
COPB1-212ENST00000534771 GOLGA8TH3BQL2 631 aa-0.78□□□□□ -2.53
COPB1-212ENST00000534771 M0R381 172 aa-0.78□□□□□ -2.53
COPB1-212ENST00000534771 FAAHO00519 579 aa-0.78□□□□□ -2.53
COPB1-212ENST00000534771 MRASO14807 208 aa-0.78□□□□□ -2.53
COPB1-212ENST00000534771 FKBP2P26885 142 aaKnown RBP-0.78□□□□□ -2.53
COPB1-212ENST00000534771 RHOGP84095 191 aa-0.78□□□□□ -2.53
COPB1-212ENST00000534771 RAB31Q13636 194 aa-0.78□□□□□ -2.53
COPB1-212ENST00000534771 IL18Q14116 193 aa-0.78□□□□□ -2.53
COPB1-212ENST00000534771 BSXQ3C1V8 233 aa-0.78□□□□□ -2.53
COPB1-212ENST00000534771 ASB16-AS1Q495Z4 193 aa-0.78□□□□□ -2.53
COPB1-212ENST00000534771 ACTL10Q5JWF8 245 aa-0.78□□□□□ -2.53
COPB1-212ENST00000534771 TEX261Q6UWH6 196 aa-0.78□□□□□ -2.53
COPB1-212ENST00000534771 C1orf174Q8IYL3 243 aa-0.78□□□□□ -2.53
COPB1-212ENST00000534771 ARHGAP18Q8N392 663 aa-0.78□□□□□ -2.53
COPB1-212ENST00000534771 WFDC11Q8NEX6 87 aa-0.78□□□□□ -2.53
COPB1-212ENST00000534771 OR6N2Q8NGY6 317 aa-0.78□□□□□ -2.53
COPB1-212ENST00000534771 FAM213BQ8TBF2 198 aa-0.78□□□□□ -2.53
COPB1-212ENST00000534771 FAM45AQ8TCE6 357 aa-0.78□□□□□ -2.53
COPB1-212ENST00000534771 C12orf43Q96C57 262 aaKnown RBP-0.78□□□□□ -2.53
COPB1-212ENST00000534771 MS4A6EQ96DS6 147 aa-0.78□□□□□ -2.53
COPB1-212ENST00000534771 CERS2Q96G23 380 aa-0.78□□□□□ -2.53
COPB1-212ENST00000534771 MYCBPQ99417 103 aaPredicted RBP-0.78□□□□□ -2.53
COPB1-212ENST00000534771 HINT2Q9BX68 163 aa-0.78□□□□□ -2.53
COPB1-212ENST00000534771 PROK2Q9HC23 129 aa-0.78□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms