RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 RNF24Q9Y225 148 aa2.54□□□□□ -2
USP48-215ENST00000534705 YARS2Q9Y2Z4 477 aaKnown RBP2.54□□□□□ -2
USP48-215ENST00000534705 KPTNQ9Y664 436 aa2.54□□□□□ -2
USP48-215ENST00000534705 V9GYS6 101 aa2.54□□□□□ -2
USP48-215ENST00000534705 CADP27708 2225 aa2.54□□□□□ -2
USP48-215ENST00000534705 PRRC2AP48634 2157 aaKnown RBP2.54□□□□□ -2
USP48-215ENST00000534705 PLCE1Q9P212 2302 aa2.53□□□□□ -2
USP48-215ENST00000534705 RTTNQ86VV8 2226 aa2.53□□□□□ -2
USP48-215ENST00000534705 ARFGEF3Q5TH69 2177 aa2.53□□□□□ -2
USP48-215ENST00000534705 CR1P17927 2039 aa2.53□□□□□ -2
USP48-215ENST00000534705 TRBV9A0A0B4J1U6 114 aa2.53□□□□□ -2
USP48-215ENST00000534705 TRAV17A0A0B4J275 112 aa2.53□□□□□ -2
USP48-215ENST00000534705 IGHV2-70DA0A0C4DH43 119 aa2.53□□□□□ -2
USP48-215ENST00000534705 A0A0G2JMM0 328 aa2.53□□□□□ -2
USP48-215ENST00000534705 TEX48A0A1B0GUV7 120 aa2.53□□□□□ -2
USP48-215ENST00000534705 A0A1W2PPB8 328 aa2.53□□□□□ -2
USP48-215ENST00000534705 A0A1W2PRS3 328 aa2.53□□□□□ -2
USP48-215ENST00000534705 PINLYPA6NC86 204 aa2.53□□□□□ -2
USP48-215ENST00000534705 GGT3PA6NGU5 568 aa2.53□□□□□ -2
USP48-215ENST00000534705 ZNF726A6NNF4 738 aa2.53□□□□□ -2
USP48-215ENST00000534705 RNF212BA8MTL3 300 aa2.53□□□□□ -2
USP48-215ENST00000534705 KIR3DP1A8MWS1 328 aa2.53□□□□□ -2
USP48-215ENST00000534705 LRRN3E7EW58 273 aa2.53□□□□□ -2
USP48-215ENST00000534705 GABARAPH6UMI1 98 aa2.53□□□□□ -2
USP48-215ENST00000534705 MANBAO00462 879 aa2.53□□□□□ -2
USP48-215ENST00000534705 EEF1E1O43324 174 aaKnown RBP2.53□□□□□ -2
USP48-215ENST00000534705 SOX15O60248 233 aa2.53□□□□□ -2
USP48-215ENST00000534705 ADAP1O75689 374 aa2.53□□□□□ -2
USP48-215ENST00000534705 FARS2O95363 451 aaKnown RBP2.53□□□□□ -2
USP48-215ENST00000534705 RAB36O95755 333 aa2.53□□□□□ -2
USP48-215ENST00000534705 ZNF682O95780 498 aa2.53□□□□□ -2
USP48-215ENST00000534705 HPRT1P00492 218 aa2.53□□□□□ -2
USP48-215ENST00000534705 IGHG4P01861 327 aa2.53□□□□□ -2
USP48-215ENST00000534705 HLA-HP01893 362 aa2.53□□□□□ -2
USP48-215ENST00000534705 PMP2P02689 132 aa2.53□□□□□ -2
USP48-215ENST00000534705 IFNA6P05013 189 aa2.53□□□□□ -2
USP48-215ENST00000534705 OR9G9P0C7N8 305 aa2.53□□□□□ -2
USP48-215ENST00000534705 ZNF14P17017 642 aaPredicted RBP2.53□□□□□ -2
USP48-215ENST00000534705 PMCHP20382 165 aa2.53□□□□□ -2
USP48-215ENST00000534705 IL12BP29460 328 aa2.53□□□□□ -2
USP48-215ENST00000534705 ID1P41134 155 aa2.53□□□□□ -2
USP48-215ENST00000534705 SSR2P43308 183 aa2.53□□□□□ -2
USP48-215ENST00000534705 RND2P52198 227 aa2.53□□□□□ -2
USP48-215ENST00000534705 CAV3P56539 151 aa2.53□□□□□ -2
USP48-215ENST00000534705 PRPS1P60891 318 aa2.53□□□□□ -2
USP48-215ENST00000534705 RPS23P62266 143 aaKnown RBP2.53□□□□□ -2
USP48-215ENST00000534705 SELENOWP63302 87 aa2.53□□□□□ -2
USP48-215ENST00000534705 LCN2P80188 198 aa2.53□□□□□ -2
USP48-215ENST00000534705 RHOGP84095 191 aa2.53□□□□□ -2
USP48-215ENST00000534705 CDK5Q00535 292 aa2.53□□□□□ -2
USP48-215ENST00000534705 TLE4Q04727 773 aa2.53□□□□□ -2
USP48-215ENST00000534705 SSBP1Q04837 148 aaKnown RBP2.53□□□□□ -2
USP48-215ENST00000534705 MXD1Q05195 221 aa2.53□□□□□ -2
USP48-215ENST00000534705 FOXF1Q12946 379 aa2.53□□□□□ -2
USP48-215ENST00000534705 PRSS8Q16651 343 aa2.53□□□□□ -2
USP48-215ENST00000534705 MORN2Q502X0 79 aa2.53□□□□□ -2
USP48-215ENST00000534705 FHL5Q5TD97 284 aa2.53□□□□□ -2
USP48-215ENST00000534705 GLT8D1Q68CQ7 371 aa2.53□□□□□ -2
USP48-215ENST00000534705 OR10K2Q6IF99 312 aa2.53□□□□□ -2
USP48-215ENST00000534705 EIF5AL1Q6IS14 154 aaKnown RBP2.53□□□□□ -2
USP48-215ENST00000534705 HIST2H3AQ71DI3 136 aa2.53□□□□□ -2
USP48-215ENST00000534705 SMIM15Q7Z3B0 74 aa2.53□□□□□ -2
USP48-215ENST00000534705 COMMD6Q7Z4G1 85 aa2.53□□□□□ -2
USP48-215ENST00000534705 SLC35E3Q7Z769 313 aa2.53□□□□□ -2
USP48-215ENST00000534705 RPS19BP1Q86WX3 136 aaKnown RBP2.53□□□□□ -2
USP48-215ENST00000534705 H1FOOQ8IZA3 346 aaPredicted RBP2.53□□□□□ -2
USP48-215ENST00000534705 CD177Q8N6Q3 437 aa2.53□□□□□ -2
USP48-215ENST00000534705 SAMD12Q8N8I0 201 aa2.53□□□□□ -2
USP48-215ENST00000534705 ZNF615Q8N8J6 731 aa2.53□□□□□ -2
USP48-215ENST00000534705 MORN4Q8NDC4 146 aa2.53□□□□□ -2
USP48-215ENST00000534705 ST6GALNAC3Q8NDV1 305 aa2.53□□□□□ -2
USP48-215ENST00000534705 KLHL30-AS1Q8NEE0 82 aa2.53□□□□□ -2
USP48-215ENST00000534705 NOXO1Q8NFA2 376 aa2.53□□□□□ -2
USP48-215ENST00000534705 OR51S1Q8NGJ8 323 aa2.53□□□□□ -2
USP48-215ENST00000534705 OR6T1Q8NGN1 323 aa2.53□□□□□ -2
USP48-215ENST00000534705 OR5AK2Q8NH90 309 aa2.53□□□□□ -2
USP48-215ENST00000534705 TERB2Q8NHR7 220 aa2.53□□□□□ -2
USP48-215ENST00000534705 NEIL3Q8TAT5 605 aa2.53□□□□□ -2
USP48-215ENST00000534705 SLC7A13Q8TCU3 470 aa2.53□□□□□ -2
USP48-215ENST00000534705 RPS4Y2Q8TD47 263 aa2.53□□□□□ -2
USP48-215ENST00000534705 DOK4Q8TEW6 326 aa2.53□□□□□ -2
USP48-215ENST00000534705 RNF138Q8WVD3 245 aa2.53□□□□□ -2
USP48-215ENST00000534705 GEMIN6Q8WXD5 167 aaKnown RBP2.53□□□□□ -2
USP48-215ENST00000534705 S100PBPQ96BU1 408 aa2.53□□□□□ -2
USP48-215ENST00000534705 TMEM56Q96MV1 263 aa2.53□□□□□ -2
USP48-215ENST00000534705 ZNF681Q96N22 645 aa2.53□□□□□ -2
USP48-215ENST00000534705 HIST1H2BLQ99880 126 aa2.53□□□□□ -2
USP48-215ENST00000534705 FAM173AQ9BQD7 235 aa2.53□□□□□ -2
USP48-215ENST00000534705 HINT2Q9BX68 163 aa2.53□□□□□ -2
USP48-215ENST00000534705 TSSK6Q9BXA6 273 aa2.53□□□□□ -2
USP48-215ENST00000534705 OR8D2Q9GZM6 311 aa2.53□□□□□ -2
USP48-215ENST00000534705 SLC25A31Q9H0C2 315 aa2.53□□□□□ -2
USP48-215ENST00000534705 ARV1Q9H2C2 271 aa2.53□□□□□ -2
USP48-215ENST00000534705 PRO1933Q9H354 126 aa2.53□□□□□ -2
USP48-215ENST00000534705 SMDT1Q9H4I9 107 aa2.53□□□□□ -2
USP48-215ENST00000534705 ELL3Q9HB65 397 aaPredicted RBP2.53□□□□□ -2
USP48-215ENST00000534705 RHOFQ9HBH0 211 aa2.53□□□□□ -2
USP48-215ENST00000534705 B4GALT7Q9UBV7 327 aa2.53□□□□□ -2
USP48-215ENST00000534705 ZNF835Q9Y2P0 537 aa2.53□□□□□ -2
USP48-215ENST00000534705 TMEM56-RWDD3S4R434 201 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms