RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 FAM166BA8MTA8 275 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.62□□□□□ -1.99
CSDE1-216ENST00000534389 TRAPPC2LH3BP13 241 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 J3QR06 171 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 K7EP34 96 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 BMPR1BO00238 502 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 SLC17A3O00476 420 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 FCN1O00602 326 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 ADAM20O43506 726 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 TRAF3IP2O43734 574 aaPredicted RBP2.62□□□□□ -1.99
CSDE1-216ENST00000534389 CHST1O43916 411 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 SLC16A7O60669 478 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 ZNF324O75467 553 aaPredicted RBP2.62□□□□□ -1.99
CSDE1-216ENST00000534389 GAGE7O76087 117 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 RENP00797 406 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 NRASP01111 189 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 KRASP01116 189 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 CRYAAP02489 173 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 GAGE12FP0CL80 117 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 GAGE12GP0CL81 117 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 GAGE12IP0CL82 117 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 SMIM10L1P0DMW3 83 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 CD99P14209 185 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 PGCP20142 388 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 MSR1P21757 451 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 VDAC1P21796 283 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 BLVRBP30043 206 aaPredicted RBP2.62□□□□□ -1.99
CSDE1-216ENST00000534389 CD52P31358 61 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 CA7P43166 264 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 IER3P46695 156 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 GABRA2P47869 451 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 PPOXP50336 477 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 OR1D5P58170 312 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 HERV-K104P63124 156 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 MEF2BQ02080 365 aaPredicted RBP2.62□□□□□ -1.99
CSDE1-216ENST00000534389 MEF2CQ06413 473 aaPredicted RBP2.62□□□□□ -1.99
CSDE1-216ENST00000534389 FMODQ06828 376 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 HSD52Q0P140 79 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 Q0VFX4 171 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 GAGE4Q13068 117 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 VGLL4Q14135 290 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 MLF2Q15773 248 aaPredicted RBP2.62□□□□□ -1.99
CSDE1-216ENST00000534389 LRRC75BQ2VPJ9 315 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 TMEM249Q2WGJ8 235 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 NMSQ5H8A3 153 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 CLLU1OSQ5K130 101 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 DCAF12Q5T6F0 453 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 PRAMEF5Q5TYX0 476 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 GDF5OSQ5U4N7 250 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 PRAMEF6Q5VXH4 476 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 STUMQ69YW2 141 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 DNM1P34Q6PK57 102 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 ZNF841Q6ZN19 808 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 TMEM136Q6ZRR5 245 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 C9orf47Q6ZRZ4 202 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 Q6ZSR6 202 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 C6orf201Q7Z4U5 140 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 VN1R4Q7Z5H5 301 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 COMMD2Q86X83 199 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 LINC00346Q8IVM7 164 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 PRR22Q8IZ63 422 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 KLHDC1Q8N7A1 406 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 OR8B3Q8NGG8 313 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 OR5D14Q8NGL3 314 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 OR2A1Q8NGT9 310 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 OR4F5Q8NH21 305 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 OR4C3Q8NH37 302 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 OR52N5Q8NH56 324 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 TSKUQ8WUA8 353 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 RND1Q92730 232 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 LHX4Q969G2 390 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 SPSB1Q96BD6 273 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 PERPQ96FX8 193 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 SMIM10Q96HG1 83 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 KCNS1Q96KK3 526 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 GUCD1Q96NT3 240 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 OR2V2Q96R30 315 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 OR4C12Q96R67 309 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 OR8B2Q96RD0 313 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 CCDC3Q9BQI4 270 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 CHRDL1Q9BU40 450 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 SFXN3Q9BWM7 321 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 TMEM59Q9BXS4 323 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 SAMD10Q9BYL1 202 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 CHRNA10Q9GZZ6 450 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 MMP25Q9NPA2 562 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 PNO1Q9NRX1 252 aaKnown RBP2.62□□□□□ -1.99
CSDE1-216ENST00000534389 PLEKHJ1Q9NW61 149 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 SS18L2Q9UHA2 77 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 PPP1R3CQ9UQK1 317 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 WASHC3Q9Y3C0 194 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 TSSC4Q9Y5U2 329 aaPredicted RBP2.62□□□□□ -1.99
CSDE1-216ENST00000534389 TMEM14AQ9Y6G1 99 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 COL4A2P08572 1712 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 KIF26BQ2KJY2 2108 aa2.62□□□□□ -1.99
CSDE1-216ENST00000534389 CACNA1CQ13936 2221 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 PHF3Q92576 2039 aaKnown RBP2.61□□□□□ -1.99
CSDE1-216ENST00000534389 TRPM6Q9BX84 2022 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 IGLV5-37A0A075B6J1 123 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms