RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-223ENST00000533979 SMARCD3Q6STE5 483 aa3.21□□□□□ -1.9
ATM-223ENST00000533979 MUC15Q8N387 334 aa3.21□□□□□ -1.9
ATM-223ENST00000533979 SMIM20Q8N5G0 67 aa3.21□□□□□ -1.9
ATM-223ENST00000533979 DRAM1Q8N682 238 aa3.21□□□□□ -1.9
ATM-223ENST00000533979 SUMF2Q8NBJ7 301 aa3.21□□□□□ -1.9
ATM-223ENST00000533979 OR2Z1Q8NG97 314 aa3.21□□□□□ -1.9
ATM-223ENST00000533979 OR5H6Q8NGV6 325 aa3.21□□□□□ -1.9
ATM-223ENST00000533979 GHSRQ92847 366 aa3.21□□□□□ -1.9
ATM-223ENST00000533979 PTX4Q96A99 478 aa3.21□□□□□ -1.9
ATM-223ENST00000533979 IMP4Q96G21 291 aaKnown RBP3.21□□□□□ -1.9
ATM-223ENST00000533979 BTF3L4Q96K17 158 aa3.21□□□□□ -1.9
ATM-223ENST00000533979 ZNF649Q9BS31 505 aa3.21□□□□□ -1.9
ATM-223ENST00000533979 PECRQ9BY49 303 aa3.21□□□□□ -1.9
ATM-223ENST00000533979 FBXL15Q9H469 300 aa3.21□□□□□ -1.9
ATM-223ENST00000533979 MMP26Q9NRE1 261 aa3.21□□□□□ -1.9
ATM-223ENST00000533979 DMAC2Q9NW81 257 aa3.21□□□□□ -1.9
ATM-223ENST00000533979 VPS29Q9UBQ0 182 aa3.21□□□□□ -1.9
ATM-223ENST00000533979 NUFIP1Q9UHK0 495 aaKnown RBP3.21□□□□□ -1.9
ATM-223ENST00000533979 GNG8Q9UK08 70 aa3.21□□□□□ -1.9
ATM-223ENST00000533979 SLC35A3Q9Y2D2 325 aa3.21□□□□□ -1.9
ATM-223ENST00000533979 ENPP4Q9Y6X5 453 aa3.21□□□□□ -1.9
ATM-223ENST00000533979 ATG2AQ2TAZ0 1938 aa3.21□□□□□ -1.9
ATM-223ENST00000533979 IGSF9BQ9UPX0 1349 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 TRAV19A0A0A6YYK7 116 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 TGIF2-C20orf24A0A0A6YYL0 155 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 CENPVL3A0A0U1RRI6 287 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 FAM183AA6NL82 134 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 ZNF878C9JN71 531 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 C8orf87E5RJ46 101 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 NDUFC2-KCTD14E9PQ53 114 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 C5orf67F2Z3F1 127 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 TRAPPC2LH3BP13 241 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 C15orf65H3BRN8 121 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 M0R1X1 148 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 FFAR1O14842 300 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 TRAF3IP2O43734 574 aaPredicted RBP3.2□□□□□ -1.9
ATM-223ENST00000533979 HAND1O96004 215 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 PYCR1P32322 319 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 NMUP48645 174 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 WNT4P56705 351 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 CKS1BP61024 79 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 FMODQ06828 376 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 ADIGQ0VDE8 80 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 ERCC8Q13216 396 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 EDDM3AQ14507 147 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 SURF2Q15527 256 aaPredicted RBP3.2□□□□□ -1.9
ATM-223ENST00000533979 ZNF404Q494X3 552 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 TMEM97Q5BJF2 176 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 C9orf129Q5T035 196 aaKnown RBP3.2□□□□□ -1.9
ATM-223ENST00000533979 Q6ZSR6 202 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 TGIF2LYQ8IUE0 185 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 LRRC25Q8N386 305 aaPredicted RBP3.2□□□□□ -1.9
ATM-223ENST00000533979 OR1P1Q8NH06 330 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 ZNF420Q8TAQ5 688 aaPredicted RBP3.2□□□□□ -1.9
ATM-223ENST00000533979 SLC37A2Q8TED4 501 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 Q8WTZ3 238 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 CYYR1Q96J86 154 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 TBX5Q99593 518 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 SIGMAR1Q99720 223 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 MS4A8Q9BY19 250 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 SLC25A31Q9H0C2 315 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 COPZ2Q9P299 210 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 OR12D3Q9UGF7 316 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 NEU3Q9UQ49 428 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.2□□□□□ -1.9
ATM-223ENST00000533979 RBM7Q9Y580 266 aaKnown RBP3.2□□□□□ -1.9
ATM-223ENST00000533979 COL1A2P08123 1366 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 FREM2Q5SZK8 3169 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 NLRC5Q86WI3 1866 aa3.2□□□□□ -1.9
ATM-223ENST00000533979 SETD2Q9BYW2 2564 aaPredicted RBP3.19□□□□□ -1.9
ATM-223ENST00000533979 VWA8A3KMH1 1905 aa3.19□□□□□ -1.9
ATM-223ENST00000533979 IGHV3-66A0A0C4DH42 116 aa3.19□□□□□ -1.9
ATM-223ENST00000533979 PGPA6NDG6 321 aa3.19□□□□□ -1.9
ATM-223ENST00000533979 INS-IGF2F8WCM5 200 aa3.19□□□□□ -1.9
ATM-223ENST00000533979 H3BP45 60 aa3.19□□□□□ -1.9
ATM-223ENST00000533979 K7ERU9 68 aa3.19□□□□□ -1.9
ATM-223ENST00000533979 TP53I11O14683 189 aa3.19□□□□□ -1.9
ATM-223ENST00000533979 SLC37A4O43826 429 aa3.19□□□□□ -1.9
ATM-223ENST00000533979 CA2P00918 260 aa3.19□□□□□ -1.9
ATM-223ENST00000533979 INSP01308 110 aa3.19□□□□□ -1.9
ATM-223ENST00000533979 IGF2P01344 180 aa3.19□□□□□ -1.9
ATM-223ENST00000533979 C1QCP02747 245 aa3.19□□□□□ -1.9
ATM-223ENST00000533979 MUC1P15941 1255 aaPredicted RBP3.19□□□□□ -1.9
ATM-223ENST00000533979 HIST1H1TP22492 207 aaPredicted RBP3.19□□□□□ -1.9
ATM-223ENST00000533979 S100A11P31949 105 aa3.19□□□□□ -1.9
ATM-223ENST00000533979 ZNF136P52737 540 aa3.19□□□□□ -1.9
ATM-223ENST00000533979 CRISP3P54108 245 aa3.19□□□□□ -1.9
ATM-223ENST00000533979 PFN3P60673 137 aa3.19□□□□□ -1.9
ATM-223ENST00000533979 TBPL1P62380 186 aa3.19□□□□□ -1.9
ATM-223ENST00000533979 RAP1AP62834 184 aa3.19□□□□□ -1.9
ATM-223ENST00000533979 GRB2P62993 217 aaKnown RBP3.19□□□□□ -1.9
ATM-223ENST00000533979 CDK5Q00535 292 aa3.19□□□□□ -1.9
ATM-223ENST00000533979 OR2F1Q13607 317 aa3.19□□□□□ -1.9
ATM-223ENST00000533979 PLPPR5Q32ZL2 321 aa3.19□□□□□ -1.9
ATM-223ENST00000533979 ATP6AP1LQ52LC2 224 aa3.19□□□□□ -1.9
ATM-223ENST00000533979 TMEM128Q5BJH2 165 aa3.19□□□□□ -1.9
ATM-223ENST00000533979 ACSBG2Q5FVE4 666 aa3.19□□□□□ -1.9
ATM-223ENST00000533979 TNFAIP8L2Q6P589 184 aaPredicted RBP3.19□□□□□ -1.9
ATM-223ENST00000533979 MDP1Q86V88 176 aa3.19□□□□□ -1.9
ATM-223ENST00000533979 ST6GALNAC3Q8NDV1 305 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms