RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 C19orf35Q6ZS72 473 aa10.41□□□□□ -0.74
CMTM1-219ENST00000533953 LHFPL1Q86WI0 220 aa10.41□□□□□ -0.74
CMTM1-219ENST00000533953 MRPL41Q8IXM3 137 aaKnown RBP10.41□□□□□ -0.74
CMTM1-219ENST00000533953 OR4C16Q8NGL9 310 aa10.41□□□□□ -0.74
CMTM1-219ENST00000533953 TMEM167AQ8TBQ9 72 aa10.41□□□□□ -0.74
CMTM1-219ENST00000533953 MARCH1Q8TCQ1 289 aa10.41□□□□□ -0.74
CMTM1-219ENST00000533953 MYOZ3Q8TDC0 251 aa10.41□□□□□ -0.74
CMTM1-219ENST00000533953 SRSF12Q8WXF0 261 aaKnown RBP10.41□□□□□ -0.74
CMTM1-219ENST00000533953 PHB2Q99623 299 aa10.41□□□□□ -0.74
CMTM1-219ENST00000533953 V9GYH0 126 aa10.41□□□□□ -0.74
CMTM1-219ENST00000533953 NOTCH3Q9UM47 2321 aa10.4□□□□□ -0.74
CMTM1-219ENST00000533953 CCL24O00175 119 aa10.4□□□□□ -0.74
CMTM1-219ENST00000533953 RBMXL2O75526 392 aaKnown RBP10.4□□□□□ -0.74
CMTM1-219ENST00000533953 KBTBD11O94819 623 aa10.4□□□□□ -0.74
CMTM1-219ENST00000533953 HPRT1P00492 218 aa10.4□□□□□ -0.74
CMTM1-219ENST00000533953 HRASP01112 189 aa10.4□□□□□ -0.74
CMTM1-219ENST00000533953 PRH1P02810 166 aa10.4□□□□□ -0.74
CMTM1-219ENST00000533953 PRB2P02812 416 aaPredicted RBP10.4□□□□□ -0.74
CMTM1-219ENST00000533953 IL6RP08887 468 aaPredicted RBP10.4□□□□□ -0.74
CMTM1-219ENST00000533953 F2RP25116 425 aa10.4□□□□□ -0.74
CMTM1-219ENST00000533953 UCP3P55916 312 aa10.4□□□□□ -0.74
CMTM1-219ENST00000533953 RAB25P57735 213 aa10.4□□□□□ -0.74
CMTM1-219ENST00000533953 MRPS10P82664 201 aaKnown RBP10.4□□□□□ -0.74
CMTM1-219ENST00000533953 ZNF79Q15937 498 aa10.4□□□□□ -0.74
CMTM1-219ENST00000533953 CCDC190Q86UF4 302 aa10.4□□□□□ -0.74
CMTM1-219ENST00000533953 MMD2Q8IY49 270 aa10.4□□□□□ -0.74
CMTM1-219ENST00000533953 CMTM1Q8IZ96 169 aa10.4□□□□□ -0.74
CMTM1-219ENST00000533953 LINC00482Q8N8I6 264 aa10.4□□□□□ -0.74
CMTM1-219ENST00000533953 FYTTD1Q96QD9 318 aaKnown RBP10.4□□□□□ -0.74
CMTM1-219ENST00000533953 THAP7Q9BT49 309 aaPredicted RBP10.4□□□□□ -0.74
CMTM1-219ENST00000533953 HRASLSQ9HDD0 168 aa10.4□□□□□ -0.74
CMTM1-219ENST00000533953 NSG2Q9Y328 171 aa10.4□□□□□ -0.74
CMTM1-219ENST00000533953 NOTCH1P46531 2555 aa10.39□□□□□ -0.75
CMTM1-219ENST00000533953 ANKRD20A5PA0PJZ0 165 aa10.39□□□□□ -0.75
CMTM1-219ENST00000533953 RBFOX2O43251 390 aaKnown RBP eCLIP10.39□□□□□ -0.75
CMTM1-219ENST00000533953 ACTL6BO94805 426 aa10.39□□□□□ -0.75
CMTM1-219ENST00000533953 KRASP01116 189 aa10.39□□□□□ -0.75
CMTM1-219ENST00000533953 TRGV3P03979 118 aa10.39□□□□□ -0.75
CMTM1-219ENST00000533953 CD33P20138 364 aa10.39□□□□□ -0.75
CMTM1-219ENST00000533953 S100A5P33763 92 aa10.39□□□□□ -0.75
CMTM1-219ENST00000533953 G6PCP35575 357 aa10.39□□□□□ -0.75
CMTM1-219ENST00000533953 TPPP2P59282 170 aa10.39□□□□□ -0.75
CMTM1-219ENST00000533953 DEFA6Q01524 100 aa10.39□□□□□ -0.75
CMTM1-219ENST00000533953 SP6Q3SY56 376 aa10.39□□□□□ -0.75
CMTM1-219ENST00000533953 LPCAT3Q6P1A2 487 aa10.39□□□□□ -0.75
CMTM1-219ENST00000533953 SLC38A6Q8IZM9 456 aa10.39□□□□□ -0.75
CMTM1-219ENST00000533953 ARRDC1Q8N5I2 433 aa10.39□□□□□ -0.75
CMTM1-219ENST00000533953 POC5Q8NA72 575 aa10.39□□□□□ -0.75
CMTM1-219ENST00000533953 WFDC9Q8NEX5 89 aa10.39□□□□□ -0.75
CMTM1-219ENST00000533953 OR6Q1Q8NGQ2 317 aa10.39□□□□□ -0.75
CMTM1-219ENST00000533953 OR13C8Q8NGS7 320 aa10.39□□□□□ -0.75
CMTM1-219ENST00000533953 TERB2Q8NHR7 220 aa10.39□□□□□ -0.75
CMTM1-219ENST00000533953 P2RX4Q99571 388 aa10.39□□□□□ -0.75
CMTM1-219ENST00000533953 SLC2A9Q9NRM0 540 aa10.39□□□□□ -0.75
CMTM1-219ENST00000533953 TMEM140Q9NV12 185 aa10.39□□□□□ -0.75
CMTM1-219ENST00000533953 COA4Q9NYJ1 87 aa10.39□□□□□ -0.75
CMTM1-219ENST00000533953 VSIG4Q9Y279 399 aa10.39□□□□□ -0.75
CMTM1-219ENST00000533953 TNCP24821 2201 aa10.38□□□□□ -0.75
CMTM1-219ENST00000533953 CGB1A6NKQ9 187 aa10.38□□□□□ -0.75
CMTM1-219ENST00000533953 TEX22C9J3V5 150 aa10.38□□□□□ -0.75
CMTM1-219ENST00000533953 UPK2O00526 184 aa10.38□□□□□ -0.75
CMTM1-219ENST00000533953 MPPED1O15442 326 aa10.38□□□□□ -0.75
CMTM1-219ENST00000533953 IGKV1-39P01597 117 aa10.38□□□□□ -0.75
CMTM1-219ENST00000533953 IGKV1D-39P04432 117 aa10.38□□□□□ -0.75
CMTM1-219ENST00000533953 AKAIN1P0CW23 69 aa10.38□□□□□ -0.75
CMTM1-219ENST00000533953 AREGP15514 252 aa10.38□□□□□ -0.75
CMTM1-219ENST00000533953 NQO2P16083 231 aa10.38□□□□□ -0.75
CMTM1-219ENST00000533953 TBPP20226 339 aa10.38□□□□□ -0.75
CMTM1-219ENST00000533953 MYCNOSP40205 109 aa10.38□□□□□ -0.75
CMTM1-219ENST00000533953 PIGPP57054 158 aa10.38□□□□□ -0.75
CMTM1-219ENST00000533953 TAS2R31P59538 309 aa10.38□□□□□ -0.75
CMTM1-219ENST00000533953 SSBP1Q04837 148 aaKnown RBP10.38□□□□□ -0.75
CMTM1-219ENST00000533953 DMBX1Q8NFW5 382 aa10.38□□□□□ -0.75
CMTM1-219ENST00000533953 OR11H1Q8NG94 326 aa10.38□□□□□ -0.75
CMTM1-219ENST00000533953 OR51S1Q8NGJ8 323 aa10.38□□□□□ -0.75
CMTM1-219ENST00000533953 OR5M8Q8NGP6 311 aa10.38□□□□□ -0.75
CMTM1-219ENST00000533953 C4orf3Q8WVX3 66 aa10.38□□□□□ -0.75
CMTM1-219ENST00000533953 BORCS5Q969J3 196 aa10.38□□□□□ -0.75
CMTM1-219ENST00000533953 UBE2E2Q96LR5 201 aa10.38□□□□□ -0.75
CMTM1-219ENST00000533953 PLEKHA2Q9HB19 425 aa10.38□□□□□ -0.75
CMTM1-219ENST00000533953 DISC1C4P0D8 188 aa10.37□□□□□ -0.75
CMTM1-219ENST00000533953 I3L521 148 aa10.37□□□□□ -0.75
CMTM1-219ENST00000533953 REG1AP05451 166 aa10.37□□□□□ -0.75
CMTM1-219ENST00000533953 OR9G9P0C7N8 305 aa10.37□□□□□ -0.75
CMTM1-219ENST00000533953 HLA-GP17693 338 aa10.37□□□□□ -0.75
CMTM1-219ENST00000533953 RPL27AP46776 148 aaKnown RBP10.37□□□□□ -0.75
CMTM1-219ENST00000533953 RPL8P62917 257 aaKnown RBP10.37□□□□□ -0.75
CMTM1-219ENST00000533953 MEF2DQ14814 521 aa10.37□□□□□ -0.75
CMTM1-219ENST00000533953 IZUMO4Q1ZYL8 232 aa10.37□□□□□ -0.75
CMTM1-219ENST00000533953 SAMD5Q5TGI4 173 aa10.37□□□□□ -0.75
CMTM1-219ENST00000533953 Q8N402 240 aa10.37□□□□□ -0.75
CMTM1-219ENST00000533953 TCTEX1D1Q8N7M0 179 aa10.37□□□□□ -0.75
CMTM1-219ENST00000533953 ADAD2Q8NCV1 583 aaKnown RBP10.37□□□□□ -0.75
CMTM1-219ENST00000533953 OR1N2Q8NGR9 330 aa10.37□□□□□ -0.75
CMTM1-219ENST00000533953 VSTM2AQ8TAG5 236 aa10.37□□□□□ -0.75
CMTM1-219ENST00000533953 CD300LFQ8TDQ1 290 aa10.37□□□□□ -0.75
CMTM1-219ENST00000533953 TRIM63Q969Q1 353 aa10.37□□□□□ -0.75
CMTM1-219ENST00000533953 TP53RKQ96S44 253 aa10.37□□□□□ -0.75
CMTM1-219ENST00000533953 RTBDNQ9BSG5 229 aaPredicted RBP10.37□□□□□ -0.75
CMTM1-219ENST00000533953 MCUBQ9NWR8 336 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms