RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 RSRP1Q9BUV0 290 aa13.02□□□□□ -0.33
PKP3-209ENST00000533069 SDHAF2Q9NX18 166 aa13.02□□□□□ -0.33
PKP3-209ENST00000533069 WSB1Q9Y6I7 421 aa13.02□□□□□ -0.33
PKP3-209ENST00000533069 PRKDCP78527 4128 aaKnown RBP13.01□□□□□ -0.33
PKP3-209ENST00000533069 INMT-MINDY4F8WBC2 141 aa13.01□□□□□ -0.33
PKP3-209ENST00000533069 G3V318 75 aa13.01□□□□□ -0.33
PKP3-209ENST00000533069 GPR31O00270 319 aa13.01□□□□□ -0.33
PKP3-209ENST00000533069 IGLV1-40P01703 118 aa13.01□□□□□ -0.33
PKP3-209ENST00000533069 FXYD4P59646 89 aa13.01□□□□□ -0.33
PKP3-209ENST00000533069 RND3P61587 244 aa13.01□□□□□ -0.33
PKP3-209ENST00000533069 RPS16P62249 146 aaKnown RBP13.01□□□□□ -0.33
PKP3-209ENST00000533069 CX3CL1P78423 397 aa13.01□□□□□ -0.33
PKP3-209ENST00000533069 CBX3Q13185 183 aa13.01□□□□□ -0.33
PKP3-209ENST00000533069 PSG5Q15238 335 aa13.01□□□□□ -0.33
PKP3-209ENST00000533069 LCNL1Q6ZST4 164 aa13.01□□□□□ -0.33
PKP3-209ENST00000533069 ZNF645Q8N7E2 425 aa13.01□□□□□ -0.33
PKP3-209ENST00000533069 MARCH1Q8TCQ1 289 aa13.01□□□□□ -0.33
PKP3-209ENST00000533069 C4orf3Q8WVX3 66 aa13.01□□□□□ -0.33
PKP3-209ENST00000533069 RAX2Q96IS3 184 aa13.01□□□□□ -0.33
PKP3-209ENST00000533069 SLC5A7Q9GZV3 580 aa13.01□□□□□ -0.33
PKP3-209ENST00000533069 FXYD6Q9H0Q3 95 aa13.01□□□□□ -0.33
PKP3-209ENST00000533069 SLC35D1Q9NTN3 355 aa13.01□□□□□ -0.33
PKP3-209ENST00000533069 METTL1Q9UBP6 276 aaKnown RBP13.01□□□□□ -0.33
PKP3-209ENST00000533069 PLXNB1O43157 2135 aa13.01□□□□□ -0.33
PKP3-209ENST00000533069 CCL24O00175 119 aa13□□□□□ -0.33
PKP3-209ENST00000533069 RLN1P04808 185 aa13□□□□□ -0.33
PKP3-209ENST00000533069 RRASP10301 218 aa13□□□□□ -0.33
PKP3-209ENST00000533069 NDPQ00604 133 aa13□□□□□ -0.33
PKP3-209ENST00000533069 TMEM267Q0VDI3 215 aaPredicted RBP13□□□□□ -0.33
PKP3-209ENST00000533069 RTL8BQ17RB0 113 aa13□□□□□ -0.33
PKP3-209ENST00000533069 TMEM128Q5BJH2 165 aa13□□□□□ -0.33
PKP3-209ENST00000533069 KCTD9Q7L273 389 aa13□□□□□ -0.33
PKP3-209ENST00000533069 BVESQ8NE79 360 aa13□□□□□ -0.33
PKP3-209ENST00000533069 SECTM1Q8WVN6 248 aa13□□□□□ -0.33
PKP3-209ENST00000533069 DPF1Q92782 380 aa13□□□□□ -0.33
PKP3-209ENST00000533069 ADTRPQ96IZ2 230 aa13□□□□□ -0.33
PKP3-209ENST00000533069 UBE2E2Q96LR5 201 aa13□□□□□ -0.33
PKP3-209ENST00000533069 GPN1Q9HCN4 374 aaPredicted RBP13□□□□□ -0.33
PKP3-209ENST00000533069 FCN1O00602 326 aa12.99□□□□□ -0.33
PKP3-209ENST00000533069 ARPC1BO15143 372 aaKnown RBP12.99□□□□□ -0.33
PKP3-209ENST00000533069 PRB2P02812 416 aaPredicted RBP12.99□□□□□ -0.33
PKP3-209ENST00000533069 IL5P05113 134 aa12.99□□□□□ -0.33
PKP3-209ENST00000533069 ANXA3P12429 323 aa12.99□□□□□ -0.33
PKP3-209ENST00000533069 LGALS7P47929 136 aa12.99□□□□□ -0.33
PKP3-209ENST00000533069 LINC00205P59089 165 aa12.99□□□□□ -0.33
PKP3-209ENST00000533069 ECSCRQ19T08 205 aa12.99□□□□□ -0.33
PKP3-209ENST00000533069 C19orf54Q5BKX5 351 aa12.99□□□□□ -0.33
PKP3-209ENST00000533069 ZNF562Q6V9R5 426 aa12.99□□□□□ -0.33
PKP3-209ENST00000533069 SLC25A42Q86VD7 318 aa12.99□□□□□ -0.33
PKP3-209ENST00000533069 ABHD5Q8WTS1 349 aa12.99□□□□□ -0.33
PKP3-209ENST00000533069 MRGPRFQ96AM1 343 aa12.99□□□□□ -0.33
PKP3-209ENST00000533069 AURKAIP1Q9NWT8 199 aaPredicted RBP12.99□□□□□ -0.33
PKP3-209ENST00000533069 FOXA2Q9Y261 457 aaPredicted RBP12.99□□□□□ -0.33
PKP3-209ENST00000533069 VSIG4Q9Y279 399 aa12.99□□□□□ -0.33
PKP3-209ENST00000533069 KCNIP3Q9Y2W7 256 aa12.99□□□□□ -0.33
PKP3-209ENST00000533069 TGP01266 2768 aa12.98□□□□□ -0.33
PKP3-209ENST00000533069 CA2P00918 260 aa12.98□□□□□ -0.33
PKP3-209ENST00000533069 GNRHRP30968 328 aa12.98□□□□□ -0.33
PKP3-209ENST00000533069 RAB9AP51151 201 aa12.98□□□□□ -0.33
PKP3-209ENST00000533069 CATR1Q13166 79 aa12.98□□□□□ -0.33
PKP3-209ENST00000533069 DEFB136Q30KP8 78 aa12.98□□□□□ -0.33
PKP3-209ENST00000533069 TMEM177Q53S58 311 aa12.98□□□□□ -0.33
PKP3-209ENST00000533069 ZNF66Q6ZN08 573 aa12.98□□□□□ -0.33
PKP3-209ENST00000533069 SGPP2Q8IWX5 399 aa12.98□□□□□ -0.33
PKP3-209ENST00000533069 ZNF491Q8N8L2 437 aa12.98□□□□□ -0.33
PKP3-209ENST00000533069 C5orf30Q96GV9 206 aa12.98□□□□□ -0.33
PKP3-209ENST00000533069 HARBI1Q96MB7 349 aa12.98□□□□□ -0.33
PKP3-209ENST00000533069 DUX3Q96PT4 197 aa12.98□□□□□ -0.33
PKP3-209ENST00000533069 HSD17B10Q99714 261 aaKnown RBP12.98□□□□□ -0.33
PKP3-209ENST00000533069 C5orf66Q9H5L9 145 aa12.98□□□□□ -0.33
PKP3-209ENST00000533069 SLC2A9Q9NRM0 540 aa12.98□□□□□ -0.33
PKP3-209ENST00000533069 FAM212BQ9NTI7 297 aaPredicted RBP12.98□□□□□ -0.33
PKP3-209ENST00000533069 FBXO7Q9Y3I1 522 aa12.98□□□□□ -0.33
PKP3-209ENST00000533069 DNAH3Q8TD57 4116 aa12.98□□□□□ -0.33
PKP3-209ENST00000533069 TRAV6A0A075B6T7 132 aa12.97□□□□□ -0.33
PKP3-209ENST00000533069 IGKV1D-13A0A0B4J2D9 117 aa12.97□□□□□ -0.33
PKP3-209ENST00000533069 A0A1W2PN81 502 aa12.97□□□□□ -0.33
PKP3-209ENST00000533069 SNRPGP15A8MWD9 76 aa12.97□□□□□ -0.33
PKP3-209ENST00000533069 SLC25A17O43808 307 aa12.97□□□□□ -0.33
PKP3-209ENST00000533069 IGKV1-13P0DP09 117 aa12.97□□□□□ -0.33
PKP3-209ENST00000533069 DUTP33316 252 aaKnown RBP12.97□□□□□ -0.33
PKP3-209ENST00000533069 CHRNA7P36544 502 aa12.97□□□□□ -0.33
PKP3-209ENST00000533069 PIGPP57054 158 aa12.97□□□□□ -0.33
PKP3-209ENST00000533069 RAB25P57735 213 aa12.97□□□□□ -0.33
PKP3-209ENST00000533069 RUNX1Q01196 453 aa12.97□□□□□ -0.33
PKP3-209ENST00000533069 DHODHQ02127 395 aa12.97□□□□□ -0.33
PKP3-209ENST00000533069 EGFEM1PQ0D2K5 195 aa12.97□□□□□ -0.33
PKP3-209ENST00000533069 FHL3Q13643 280 aa12.97□□□□□ -0.33
PKP3-209ENST00000533069 AKIRIN2Q53H80 203 aa12.97□□□□□ -0.33
PKP3-209ENST00000533069 Q6ZNX1 250 aa12.97□□□□□ -0.33
PKP3-209ENST00000533069 TMED4Q7Z7H5 227 aa12.97□□□□□ -0.33
PKP3-209ENST00000533069 PPP1R27Q86WC6 154 aa12.97□□□□□ -0.33
PKP3-209ENST00000533069 OR5M8Q8NGP6 311 aa12.97□□□□□ -0.33
PKP3-209ENST00000533069 MRAPQ8TCY5 172 aa12.97□□□□□ -0.33
PKP3-209ENST00000533069 ARPC1AQ92747 370 aa12.97□□□□□ -0.33
PKP3-209ENST00000533069 CLCC1Q96S66 551 aa12.97□□□□□ -0.33
PKP3-209ENST00000533069 KLK15Q9H2R5 256 aa12.97□□□□□ -0.33
PKP3-209ENST00000533069 ZMAT5Q9UDW3 170 aaKnown RBP12.97□□□□□ -0.33
PKP3-209ENST00000533069 NOTCH3Q9UM47 2321 aa12.97□□□□□ -0.33
PKP3-209ENST00000533069 SHOXO15266 292 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms