RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, human

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-223	ENST00000532793	OR2J3	O76001	311 aa		7.31	□□□□□ -1.24
PPFIA1-223	ENST00000532793	HRAS	P01112	189 aa		7.31	□□□□□ -1.24
PPFIA1-223	ENST00000532793	DEFA4	P12838	97 aa		7.31	□□□□□ -1.24
PPFIA1-223	ENST00000532793	GAL	P22466	123 aa		7.31	□□□□□ -1.24
PPFIA1-223	ENST00000532793	NFYA	P23511	347 aa	Predicted RBP	7.31	□□□□□ -1.24
PPFIA1-223	ENST00000532793	RPL27A	P46776	148 aa	Known RBP	7.31	□□□□□ -1.24
PPFIA1-223	ENST00000532793	CD300E	Q496F6	205 aa	Predicted RBP	7.31	□□□□□ -1.24
PPFIA1-223	ENST00000532793	CDNF	Q49AH0	187 aa		7.31	□□□□□ -1.24
PPFIA1-223	ENST00000532793	HACD4	Q5VWC8	232 aa		7.31	□□□□□ -1.24
PPFIA1-223	ENST00000532793	C22orf42	Q6IC83	251 aa		7.31	□□□□□ -1.24
PPFIA1-223	ENST00000532793	IZUMO2	Q6UXV1	221 aa		7.31	□□□□□ -1.24
PPFIA1-223	ENST00000532793	IL34	Q6ZMJ4	242 aa		7.31	□□□□□ -1.24
PPFIA1-223	ENST00000532793	ADAMTSL5	Q6ZMM2	481 aa		7.31	□□□□□ -1.24
PPFIA1-223	ENST00000532793	SLC16A13	Q7RTY0	426 aa		7.31	□□□□□ -1.24
PPFIA1-223	ENST00000532793	TTC9C	Q8N5M4	171 aa		7.31	□□□□□ -1.24
PPFIA1-223	ENST00000532793	C5orf30	Q96GV9	206 aa		7.31	□□□□□ -1.24
PPFIA1-223	ENST00000532793	OR2A7	Q96R45	310 aa		7.31	□□□□□ -1.24
PPFIA1-223	ENST00000532793	AIFM2	Q9BRQ8	373 aa		7.31	□□□□□ -1.24
PPFIA1-223	ENST00000532793	TECR	Q9NZ01	308 aa	Known RBP	7.31	□□□□□ -1.24
PPFIA1-223	ENST00000532793	FBXL7	Q9UJT9	491 aa		7.31	□□□□□ -1.24
PPFIA1-223	ENST00000532793	SPATA2	Q9UM82	520 aa		7.31	□□□□□ -1.24
PPFIA1-223	ENST00000532793	RBMX2	Q9Y388	322 aa	Known RBP	7.31	□□□□□ -1.24
PPFIA1-223	ENST00000532793	TRBV9	A0A0B4J1U6	114 aa		7.3	□□□□□ -1.24
PPFIA1-223	ENST00000532793	ZNF320	A2RRD8	509 aa		7.3	□□□□□ -1.24
PPFIA1-223	ENST00000532793	SMIM30	A4D0T7	59 aa		7.3	□□□□□ -1.24
PPFIA1-223	ENST00000532793	IZUMO1R	A6ND01	250 aa		7.3	□□□□□ -1.24
PPFIA1-223	ENST00000532793	PPP5D1	E7EU14	171 aa		7.3	□□□□□ -1.24
PPFIA1-223	ENST00000532793	KBTBD11	O94819	623 aa		7.3	□□□□□ -1.24
PPFIA1-223	ENST00000532793	HIST1H1B	P16401	226 aa	Known RBP	7.3	□□□□□ -1.24
PPFIA1-223	ENST00000532793	MAS1L	P35410	378 aa		7.3	□□□□□ -1.24
PPFIA1-223	ENST00000532793	ARL3	P36405	182 aa		7.3	□□□□□ -1.24
PPFIA1-223	ENST00000532793	KIR2DS2	P43631	304 aa		7.3	□□□□□ -1.24
PPFIA1-223	ENST00000532793	ARPC4	P59998	168 aa		7.3	□□□□□ -1.24
PPFIA1-223	ENST00000532793	FAM106A	Q4KMX7	169 aa		7.3	□□□□□ -1.24
PPFIA1-223	ENST00000532793	C10orf55	Q5SWW7	151 aa		7.3	□□□□□ -1.24
PPFIA1-223	ENST00000532793	CNIH2	Q6PI25	160 aa		7.3	□□□□□ -1.24
PPFIA1-223	ENST00000532793	EEF1AKMT3	Q96AZ1	226 aa		7.3	□□□□□ -1.24
PPFIA1-223	ENST00000532793	SRD5A3	Q9H8P0	318 aa		7.3	□□□□□ -1.24
PPFIA1-223	ENST00000532793	TAS2R8	Q9NYW2	309 aa		7.3	□□□□□ -1.24
PPFIA1-223	ENST00000532793	TNC	P24821	2201 aa		7.29	□□□□□ -1.24
PPFIA1-223	ENST00000532793	KMT2C	Q8NEZ4	4911 aa	Known RBP	7.29	□□□□□ -1.24
PPFIA1-223	ENST00000532793	IGKV1D-8	A0A087WSZ0	117 aa		7.29	□□□□□ -1.24
PPFIA1-223	ENST00000532793	TMEM235	A6NFC5	223 aa		7.29	□□□□□ -1.24
PPFIA1-223	ENST00000532793	HMX3	A6NHT5	357 aa		7.29	□□□□□ -1.24
PPFIA1-223	ENST00000532793	NPIPB5	A8MRT5	1133 aa		7.29	□□□□□ -1.24
PPFIA1-223	ENST00000532793	NOTO	A8MTQ0	251 aa		7.29	□□□□□ -1.24
PPFIA1-223	ENST00000532793	OR11H12	B2RN74	326 aa		7.29	□□□□□ -1.24
PPFIA1-223	ENST00000532793	LGALS9	O00182	355 aa		7.29	□□□□□ -1.24
PPFIA1-223	ENST00000532793	CYB5B	O43169	146 aa		7.29	□□□□□ -1.24
PPFIA1-223	ENST00000532793	HLA-DQB1	P01920	261 aa		7.29	□□□□□ -1.24
PPFIA1-223	ENST00000532793	FOLR2	P14207	255 aa		7.29	□□□□□ -1.24
PPFIA1-223	ENST00000532793	PSMB9	P28065	219 aa		7.29	□□□□□ -1.24
PPFIA1-223	ENST00000532793	GABARAPL2	P60520	117 aa		7.29	□□□□□ -1.24
PPFIA1-223	ENST00000532793	ZNF45	Q02386	682 aa		7.29	□□□□□ -1.24
PPFIA1-223	ENST00000532793	CATR1	Q13166	79 aa		7.29	□□□□□ -1.24
PPFIA1-223	ENST00000532793	MRGPRG-AS1	Q2M3A8	158 aa		7.29	□□□□□ -1.24
PPFIA1-223	ENST00000532793	ANKRD55	Q3KP44	614 aa		7.29	□□□□□ -1.24
PPFIA1-223	ENST00000532793	OR4A47	Q6IF82	309 aa		7.29	□□□□□ -1.24
PPFIA1-223	ENST00000532793	ZNF66	Q6ZN08	573 aa		7.29	□□□□□ -1.24
PPFIA1-223	ENST00000532793	SSX9	Q7RTT3	188 aa		7.29	□□□□□ -1.24
PPFIA1-223	ENST00000532793	TPRA1	Q86W33	373 aa		7.29	□□□□□ -1.24
PPFIA1-223	ENST00000532793	VKORC1L1	Q8N0U8	176 aa		7.29	□□□□□ -1.24
PPFIA1-223	ENST00000532793	NUDCD2	Q8WVJ2	157 aa		7.29	□□□□□ -1.24
PPFIA1-223	ENST00000532793	FAM110A	Q9BQ89	295 aa		7.29	□□□□□ -1.24
PPFIA1-223	ENST00000532793	THAP7	Q9BT49	309 aa	Predicted RBP	7.29	□□□□□ -1.24
PPFIA1-223	ENST00000532793	RETN	Q9HD89	108 aa		7.29	□□□□□ -1.24
PPFIA1-223	ENST00000532793	HRASLS	Q9HDD0	168 aa		7.29	□□□□□ -1.24
PPFIA1-223	ENST00000532793	GAR1	Q9NY12	217 aa	Known RBP	7.29	□□□□□ -1.24
PPFIA1-223	ENST00000532793	THYN1	Q9P016	225 aa		7.29	□□□□□ -1.24
PPFIA1-223	ENST00000532793	DAPK2	Q9UIK4	370 aa		7.29	□□□□□ -1.24
PPFIA1-223	ENST00000532793	ANXA10	Q9UJ72	324 aa		7.29	□□□□□ -1.24
PPFIA1-223	ENST00000532793	SSR3	Q9UNL2	185 aa		7.29	□□□□□ -1.24
PPFIA1-223	ENST00000532793	RRP15	Q9Y3B9	282 aa	Known RBP	7.29	□□□□□ -1.24
PPFIA1-223	ENST00000532793	NBEAL2	Q6ZNJ1	2754 aa		7.29	□□□□□ -1.24
PPFIA1-223	ENST00000532793	TENM3	Q9P273	2699 aa		7.28	□□□□□ -1.24
PPFIA1-223	ENST00000532793	C2orf70	A6NJV1	201 aa		7.28	□□□□□ -1.24
PPFIA1-223	ENST00000532793	MRPS14	O60783	128 aa	Known RBP	7.28	□□□□□ -1.24
PPFIA1-223	ENST00000532793	RBMXL2	O75526	392 aa	Known RBP	7.28	□□□□□ -1.24
PPFIA1-223	ENST00000532793	OR2C1	O95371	312 aa		7.28	□□□□□ -1.24
PPFIA1-223	ENST00000532793	IGHV3-23	P01764	117 aa		7.28	□□□□□ -1.24
PPFIA1-223	ENST00000532793	CD7	P09564	240 aa		7.28	□□□□□ -1.24
PPFIA1-223	ENST00000532793	RPL8	P62917	257 aa	Known RBP	7.28	□□□□□ -1.24
PPFIA1-223	ENST00000532793	DEFB114	Q30KQ6	69 aa		7.28	□□□□□ -1.24
PPFIA1-223	ENST00000532793	ZNF57	Q68EA5	555 aa	Predicted RBP	7.28	□□□□□ -1.24
PPFIA1-223	ENST00000532793	CLEC19A	Q6UXS0	136 aa		7.28	□□□□□ -1.24
PPFIA1-223	ENST00000532793	MFSD4A	Q8N468	514 aa		7.28	□□□□□ -1.24
PPFIA1-223	ENST00000532793	DEFB125	Q8N687	156 aa		7.28	□□□□□ -1.24
PPFIA1-223	ENST00000532793	OR52B4	Q8NGK2	314 aa		7.28	□□□□□ -1.24
PPFIA1-223	ENST00000532793	OR4A5	Q8NH83	315 aa		7.28	□□□□□ -1.24
PPFIA1-223	ENST00000532793	TMEM167A	Q8TBQ9	72 aa		7.28	□□□□□ -1.24
PPFIA1-223	ENST00000532793	SECTM1	Q8WVN6	248 aa		7.28	□□□□□ -1.24
PPFIA1-223	ENST00000532793	FCGR1B	Q92637	280 aa		7.28	□□□□□ -1.24
PPFIA1-223	ENST00000532793	CXorf58	Q96LI9	332 aa		7.28	□□□□□ -1.24
PPFIA1-223	ENST00000532793	MRPL18	Q9H0U6	180 aa	Known RBP	7.28	□□□□□ -1.24
PPFIA1-223	ENST00000532793	HIPK2	Q9H2X6	1198 aa		7.28	□□□□□ -1.24
PPFIA1-223	ENST00000532793		Q9H521	79 aa		7.28	□□□□□ -1.24
PPFIA1-223	ENST00000532793	SLC2A9	Q9NRM0	540 aa		7.28	□□□□□ -1.24
PPFIA1-223	ENST00000532793	ELF5	Q9UKW6	265 aa	Predicted RBP	7.28	□□□□□ -1.24
PPFIA1-223	ENST00000532793	RAB26	Q9ULW5	256 aa		7.28	□□□□□ -1.24
PPFIA1-223	ENST00000532793	DNAH9	Q9NYC9	4486 aa		7.28	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms