RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 CEACAM3P40198 252 aa17.64■□□□□ 0.41
PACSIN3-209ENST00000532457 RPS16P62249 146 aaKnown RBP17.64■□□□□ 0.41
PACSIN3-209ENST00000532457 OR4C13Q8NGP0 309 aa17.64■□□□□ 0.41
PACSIN3-209ENST00000532457 OSR1Q8TAX0 266 aaPredicted RBP17.64■□□□□ 0.41
PACSIN3-209ENST00000532457 TXNL1O43396 289 aa17.63■□□□□ 0.41
PACSIN3-209ENST00000532457 HRASP01112 189 aa17.63■□□□□ 0.41
PACSIN3-209ENST00000532457 CNTFRP26992 372 aa17.63■□□□□ 0.41
PACSIN3-209ENST00000532457 OR2B8PP59922 312 aa17.63■□□□□ 0.41
PACSIN3-209ENST00000532457 ERVK-16P61578 105 aa17.63■□□□□ 0.41
PACSIN3-209ENST00000532457 KLF17Q5JT82 389 aaPredicted RBP17.63■□□□□ 0.41
PACSIN3-209ENST00000532457 TEX29Q8N6K0 151 aa17.63■□□□□ 0.41
PACSIN3-209ENST00000532457 DCUN1D4Q92564 292 aa17.63■□□□□ 0.41
PACSIN3-209ENST00000532457 HARBI1Q96MB7 349 aa17.63■□□□□ 0.41
PACSIN3-209ENST00000532457 QTRT1Q9BXR0 403 aaKnown RBP17.63■□□□□ 0.41
PACSIN3-209ENST00000532457 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.63■□□□□ 0.41
PACSIN3-209ENST00000532457 PAIP2BQ9ULR5 123 aaKnown RBP17.63■□□□□ 0.41
PACSIN3-209ENST00000532457 IGHV1-69DA0A0B4J2H0 117 aa17.63■□□□□ 0.41
PACSIN3-209ENST00000532457 RNF222A6NCQ9 220 aa17.63■□□□□ 0.41
PACSIN3-209ENST00000532457 MSGN1A6NI15 193 aa17.63■□□□□ 0.41
PACSIN3-209ENST00000532457 CHST1O43916 411 aa17.63■□□□□ 0.41
PACSIN3-209ENST00000532457 IGHV1-69P01742 117 aa17.63■□□□□ 0.41
PACSIN3-209ENST00000532457 SAA1P0DJI8 122 aaPredicted RBP17.63■□□□□ 0.41
PACSIN3-209ENST00000532457 HABP2Q14520 560 aaPredicted RBP17.63■□□□□ 0.41
PACSIN3-209ENST00000532457 MS4A7Q9GZW8 240 aaPredicted RBP17.63■□□□□ 0.41
PACSIN3-209ENST00000532457 TBL2Q9Y4P3 447 aaKnown RBP17.63■□□□□ 0.41
PACSIN3-209ENST00000532457 TNCP24821 2201 aa17.62■□□□□ 0.41
PACSIN3-209ENST00000532457 MYOD1P15172 320 aa17.62■□□□□ 0.41
PACSIN3-209ENST00000532457 PAX9P55771 341 aa17.62■□□□□ 0.41
PACSIN3-209ENST00000532457 BRD3OSQ6XYD6 125 aa17.62■□□□□ 0.41
PACSIN3-209ENST00000532457 PUSL1Q8N0Z8 303 aaKnown RBP17.62■□□□□ 0.41
PACSIN3-209ENST00000532457 OR8H3Q8N146 312 aa17.62■□□□□ 0.41
PACSIN3-209ENST00000532457 MFFQ9GZY8 342 aa17.62■□□□□ 0.41
PACSIN3-209ENST00000532457 TMEM160Q9NX00 188 aa17.62■□□□□ 0.41
PACSIN3-209ENST00000532457 TET2Q6N021 2002 aaPredicted RBP17.61■□□□□ 0.41
PACSIN3-209ENST00000532457 TRAV40A0A0B4J280 105 aa17.61■□□□□ 0.41
PACSIN3-209ENST00000532457 VENTXO95231 258 aa17.61■□□□□ 0.41
PACSIN3-209ENST00000532457 RAB13P51153 203 aa17.61■□□□□ 0.41
PACSIN3-209ENST00000532457 AP2S1P53680 142 aaPredicted RBP17.61■□□□□ 0.41
PACSIN3-209ENST00000532457 IFITM2Q01629 132 aa17.61■□□□□ 0.41
PACSIN3-209ENST00000532457 MALSU1Q96EH3 234 aa17.61■□□□□ 0.41
PACSIN3-209ENST00000532457 GSX1Q9H4S2 264 aaPredicted RBP17.61■□□□□ 0.41
PACSIN3-209ENST00000532457 ZFHX3Q15911 3703 aa17.61■□□□□ 0.41
PACSIN3-209ENST00000532457 FAM90A9PA6NNJ1 464 aa17.61■□□□□ 0.41
PACSIN3-209ENST00000532457 SSSCA1O60232 199 aa17.61■□□□□ 0.41
PACSIN3-209ENST00000532457 RLN2P04090 185 aa17.61■□□□□ 0.41
PACSIN3-209ENST00000532457 HNF1AP20823 631 aa17.61■□□□□ 0.41
PACSIN3-209ENST00000532457 MRGPRG-AS1Q2M3A8 158 aa17.61■□□□□ 0.41
PACSIN3-209ENST00000532457 AARDQ4LEZ3 155 aa17.61■□□□□ 0.41
PACSIN3-209ENST00000532457 HSPB7Q9UBY9 170 aa17.61■□□□□ 0.41
PACSIN3-209ENST00000532457 UPK2O00526 184 aa17.6■□□□□ 0.41
PACSIN3-209ENST00000532457 CD1BP29016 333 aa17.6■□□□□ 0.41
PACSIN3-209ENST00000532457 TNFRSF9Q07011 255 aa17.6■□□□□ 0.41
PACSIN3-209ENST00000532457 SPINK9Q5DT21 86 aa17.6■□□□□ 0.41
PACSIN3-209ENST00000532457 OR4A16Q8NH70 328 aa17.6■□□□□ 0.41
PACSIN3-209ENST00000532457 RBKSQ9H477 322 aa17.6■□□□□ 0.41
PACSIN3-209ENST00000532457 HIVEP2P31629 2446 aa17.6■□□□□ 0.41
PACSIN3-209ENST00000532457 OOSP1A8MZH6 123 aa17.59■□□□□ 0.41
PACSIN3-209ENST00000532457 HNF4GQ14541 408 aa17.59■□□□□ 0.41
PACSIN3-209ENST00000532457 FAM120AOSQ5T036 256 aa17.59■□□□□ 0.41
PACSIN3-209ENST00000532457 TPSG1Q9NRR2 321 aa17.59■□□□□ 0.41
PACSIN3-209ENST00000532457 SYNGR2O43760 224 aa17.58■□□□□ 0.41
PACSIN3-209ENST00000532457 PET100P0DJ07 73 aa17.58■□□□□ 0.41
PACSIN3-209ENST00000532457 HKR1P10072 659 aa17.58■□□□□ 0.41
PACSIN3-209ENST00000532457 F2RL1P55085 397 aa17.58■□□□□ 0.41
PACSIN3-209ENST00000532457 UBE2KP61086 200 aa17.58■□□□□ 0.41
PACSIN3-209ENST00000532457 ACOT7LQ6ZUV0 252 aa17.58■□□□□ 0.41
PACSIN3-209ENST00000532457 TMUB2Q71RG4 321 aa17.58■□□□□ 0.41
PACSIN3-209ENST00000532457 ZDHHC16Q969W1 377 aa17.58■□□□□ 0.41
PACSIN3-209ENST00000532457 BSCL2Q96G97 398 aaPredicted RBP17.58■□□□□ 0.41
PACSIN3-209ENST00000532457 BET1LQ9NYM9 111 aa17.58■□□□□ 0.41
PACSIN3-209ENST00000532457 E5RGE8 158 aa17.58■□□□□ 0.4
PACSIN3-209ENST00000532457 L7N2F9 121 aa17.58■□□□□ 0.4
PACSIN3-209ENST00000532457 WRBO00258 174 aa17.58■□□□□ 0.4
PACSIN3-209ENST00000532457 SLC25A17O43808 307 aa17.58■□□□□ 0.4
PACSIN3-209ENST00000532457 RBMXL2O75526 392 aaKnown RBP17.58■□□□□ 0.4
PACSIN3-209ENST00000532457 IGKV1D-33P01593 117 aa17.58■□□□□ 0.4
PACSIN3-209ENST00000532457 IGKV1-33P01594 117 aa17.58■□□□□ 0.4
PACSIN3-209ENST00000532457 CRYGBP07316 175 aa17.58■□□□□ 0.4
PACSIN3-209ENST00000532457 IAPPP10997 89 aa17.58■□□□□ 0.4
PACSIN3-209ENST00000532457 LGALS7P47929 136 aa17.58■□□□□ 0.4
PACSIN3-209ENST00000532457 PJVKQ0ZLH3 352 aa17.58■□□□□ 0.4
PACSIN3-209ENST00000532457 ZFP57Q9NU63 452 aa17.58■□□□□ 0.4
PACSIN3-209ENST00000532457 TMEM14BQ9NUH8 114 aa17.58■□□□□ 0.4
PACSIN3-209ENST00000532457 RGS13O14921 159 aa17.57■□□□□ 0.4
PACSIN3-209ENST00000532457 KBTBD11O94819 623 aa17.57■□□□□ 0.4
PACSIN3-209ENST00000532457 SNRNP70P08621 437 aaKnown RBP17.57■□□□□ 0.4
PACSIN3-209ENST00000532457 ARHGDIBP52566 201 aa17.57■□□□□ 0.4
PACSIN3-209ENST00000532457 PSG5Q15238 335 aa17.57■□□□□ 0.4
PACSIN3-209ENST00000532457 GPR157Q5UAW9 335 aa17.57■□□□□ 0.4
PACSIN3-209ENST00000532457 CCDC144NLQ6NUI1 221 aa17.57■□□□□ 0.4
PACSIN3-209ENST00000532457 NANPQ8TBE9 248 aa17.57■□□□□ 0.4
PACSIN3-209ENST00000532457 EAF1Q96JC9 268 aaPredicted RBP17.57■□□□□ 0.4
PACSIN3-209ENST00000532457 PLXNB1O43157 2135 aa17.57■□□□□ 0.4
PACSIN3-209ENST00000532457 A0A0U1RQK1 487 aa17.56■□□□□ 0.4
PACSIN3-209ENST00000532457 FAM24AA6NFZ4 105 aa17.56■□□□□ 0.4
PACSIN3-209ENST00000532457 C15orf61A6NNL5 157 aa17.56■□□□□ 0.4
PACSIN3-209ENST00000532457 FAM90A26D6RGX4 464 aa17.56■□□□□ 0.4
PACSIN3-209ENST00000532457 OR2F2O95006 317 aa17.56■□□□□ 0.4
PACSIN3-209ENST00000532457 Q71RC1 249 aaPredicted RBP17.56■□□□□ 0.4
PACSIN3-209ENST00000532457 KCNRGQ8N5I3 272 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms