RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-222	ENST00000531967	IP6K3	Q96PC2	410 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	LINC01587	Q99440	93 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	ZNF649	Q9BS31	505 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	OR2J1	Q9GZK6	312 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	ZNF71	Q9NQZ8	489 aa	Predicted RBP	4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	CBLN4	Q9NTU7	201 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	COL4A1	P02462	1669 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	IGHV4-4	A0A075B6R2	117 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967		K7EPK0	472 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	GABARAP	O95166	117 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	APOD	P05090	189 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	CRHBP	P24387	322 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	LHX2	P50458	406 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	P2RX1	P51575	399 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	SRSF4	Q08170	494 aa	Known RBP	4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	TMEM267	Q0VDI3	215 aa	Predicted RBP	4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	DAZ2	Q13117	558 aa	Known RBP	4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	IBA57	Q5T440	356 aa	Known RBP	4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	CLEC20A	Q6ZU45	233 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	VN1R4	Q7Z5H5	301 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	SLC35E3	Q7Z769	313 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	DAZ4	Q86SG3	579 aa	Known RBP	4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	TMEM86A	Q8N2M4	240 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	SLC25A45	Q8N413	288 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	LINC00337	Q8N6G1	96 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	OR5A1	Q8NGJ0	315 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	NTN5	Q8WTR8	489 aa	Predicted RBP	4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	GPR146	Q96CH1	333 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	ERMAP	Q96PL5	475 aa	Predicted RBP	4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	SFXN3	Q9BWM7	321 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	DAZ1	Q9NQZ3	744 aa	Known RBP	4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	DAZ3	Q9NR90	486 aa	Known RBP	4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	ERG28	Q9UKR5	140 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	INSIG2	Q9Y5U4	225 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	IGHV1-69D	A0A0B4J2H0	117 aa		4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	C5orf63	A6NC05	138 aa		4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	KNCN	A6PVL3	124 aa		4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	RBFOX2	O43251	390 aa	Known RBP eCLIP	4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	LOR	P23490	312 aa	Predicted RBP	4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	GADD45A	P24522	165 aa		4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	IL2RG	P31785	369 aa		4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	EIF5A	P63241	154 aa	Known RBP	4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	HIST1H1A	Q02539	215 aa	Predicted RBP	4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	ATP5L2	Q7Z4Y8	100 aa		4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	KMT2E	Q8IZD2	1858 aa		4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	DEFB107A	Q8IZN7	70 aa		4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	EXOC3-AS1	Q8N2X6	119 aa		4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	ANKRD29	Q8N6D5	301 aa		4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	ARL11	Q969Q4	196 aa		4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	ATXN7L3B	Q96GX2	97 aa		4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	GPR84	Q9NQS5	396 aa		4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	HES2	Q9Y543	173 aa		4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	TMEM269	A0A1B0GVZ9	245 aa		4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	IFITM10	A6NMD0	228 aa		4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	LAMP1	P11279	417 aa		4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	CNTFR	P26992	372 aa		4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	SRI	P30626	198 aa		4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	ZNF138	P52744	262 aa		4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	NDUFV3	P56181	108 aa	Known RBP	4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	SELENOW	P63302	87 aa		4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	KIAA0087	Q14695	138 aa		4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	RHEB	Q15382	184 aa		4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	C12orf74	Q32Q52	190 aa		4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	MORN2	Q502X0	79 aa		4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	C10orf91	Q5T1B1	145 aa		4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	REG3G	Q6UW15	175 aa		4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967		Q6ZRP5	223 aa		4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	GGN	Q86UU5	652 aa		4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	C11orf53	Q8IXP5	236 aa		4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	RFLNB	Q8N5W9	214 aa		4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	LXN	Q9BS40	222 aa		4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	LINC00470	Q9BZP3	86 aa		4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	PXMP4	Q9Y6I8	212 aa		4.04	□□□□□ -1.76
ECHDC1-222	ENST00000531967	TCRBV3S1	A0A5B6	114 aa		4.03	□□□□□ -1.76
ECHDC1-222	ENST00000531967	SS18L1	O75177	396 aa	Predicted RBP	4.03	□□□□□ -1.76
ECHDC1-222	ENST00000531967	ZNF432	O94892	652 aa		4.03	□□□□□ -1.76
ECHDC1-222	ENST00000531967	CECR9	P0C854	216 aa		4.03	□□□□□ -1.76
ECHDC1-222	ENST00000531967	NOV	P48745	357 aa		4.03	□□□□□ -1.76
ECHDC1-222	ENST00000531967	POLR2H	P52434	150 aa	Known RBP	4.03	□□□□□ -1.76
ECHDC1-222	ENST00000531967	GABARAPL2	P60520	117 aa		4.03	□□□□□ -1.76
ECHDC1-222	ENST00000531967	NCS1	P62166	190 aa		4.03	□□□□□ -1.76
ECHDC1-222	ENST00000531967	RHOG	P84095	191 aa		4.03	□□□□□ -1.76
ECHDC1-222	ENST00000531967	MORN5	Q5VZ52	161 aa		4.03	□□□□□ -1.76
ECHDC1-222	ENST00000531967	FBXW12	Q6X9E4	464 aa		4.03	□□□□□ -1.76
ECHDC1-222	ENST00000531967		Q6ZSR6	202 aa		4.03	□□□□□ -1.76
ECHDC1-222	ENST00000531967	METTL27	Q8N6F8	245 aa	Predicted RBP	4.03	□□□□□ -1.76
ECHDC1-222	ENST00000531967	ZIC4	Q8N9L1	334 aa		4.03	□□□□□ -1.76
ECHDC1-222	ENST00000531967	STARD4	Q96DR4	205 aa		4.03	□□□□□ -1.76
ECHDC1-222	ENST00000531967	NEURL3	Q96EH8	262 aa		4.03	□□□□□ -1.76
ECHDC1-222	ENST00000531967	S100A13	Q99584	98 aa		4.03	□□□□□ -1.76
ECHDC1-222	ENST00000531967	NRIP2	Q9BQI9	281 aa		4.03	□□□□□ -1.76
ECHDC1-222	ENST00000531967	NDFIP1	Q9BT67	221 aa		4.03	□□□□□ -1.76
ECHDC1-222	ENST00000531967	SLC23A2	Q9UGH3	650 aa		4.03	□□□□□ -1.76
ECHDC1-222	ENST00000531967	HEBP2	Q9Y5Z4	205 aa		4.03	□□□□□ -1.76
ECHDC1-222	ENST00000531967	OTOF	Q9HC10	1997 aa		4.03	□□□□□ -1.76
ECHDC1-222	ENST00000531967	TRAV9-2	A0A087WT02	112 aa		4.03	□□□□□ -1.77
ECHDC1-222	ENST00000531967		A0A087WUU8	490 aa		4.03	□□□□□ -1.77
ECHDC1-222	ENST00000531967	LOC389332	A0A1B0GUA5	103 aa		4.03	□□□□□ -1.77

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