RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 SLC51BQ86UW2 128 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 UMODL1-AS1Q8N2C9 162 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 TMEM86BQ8N661 226 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 OR5C1Q8NGR4 320 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 SGMS2Q8NHU3 365 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 GPR119Q8TDV5 335 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 GNPNAT1Q96EK6 184 aaPredicted RBP1.4□□□□□ -2.19
CD44-234ENST00000531873 SFRP2Q96HF1 295 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 DIRAS2Q96HU8 199 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 CAPZA3Q96KX2 299 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 C20orf166-AS1Q96NR2 134 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 CCL13Q99616 98 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 ANAPC10Q9UM13 185 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 ANKRD17O75179 2603 aaKnown RBP1.4□□□□□ -2.19
CD44-234ENST00000531873 NCKAP5O14513 1909 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 GREB1Q4ZG55 1949 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 ITGB4P16144 1822 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 WDR97A6NE52 1622 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 GCN1Q92616 2671 aaKnown RBP1.4□□□□□ -2.19
CD44-234ENST00000531873 FAM135AQ9P2D6 1515 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 NAV2Q8IVL1 2488 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 TTC28Q96AY4 2481 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 FHAD1B1AJZ9 1412 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 ZFYVE9O95405 1425 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 FMN1Q68DA7 1419 aa1.4□□□□□ -2.19
CD44-234ENST00000531873 ROBO1Q9Y6N7 1651 aa1.39□□□□□ -2.19
CD44-234ENST00000531873 DIP2AQ14689 1571 aa1.39□□□□□ -2.19
CD44-234ENST00000531873 UHRF1BP1LA0JNW5 1464 aa1.39□□□□□ -2.19
CD44-234ENST00000531873 SPTBN4Q9H254 2564 aa1.39□□□□□ -2.19
CD44-234ENST00000531873 IGHV3-15A0A0B4J1V0 119 aa1.39□□□□□ -2.19
CD44-234ENST00000531873 OR11H12B2RN74 326 aa1.39□□□□□ -2.19
CD44-234ENST00000531873 COX7A2LO14548 114 aa1.39□□□□□ -2.19
CD44-234ENST00000531873 IFNA16P05015 189 aa1.39□□□□□ -2.19
CD44-234ENST00000531873 RPS17P08708 135 aaKnown RBP1.39□□□□□ -2.19
CD44-234ENST00000531873 FUSP35637 526 aaKnown RBP eCLIP1.39□□□□□ -2.19
CD44-234ENST00000531873 GABRA4P48169 554 aa1.39□□□□□ -2.19
CD44-234ENST00000531873 MARCKSL1P49006 195 aa1.39□□□□□ -2.19
CD44-234ENST00000531873 LSM6P62312 80 aaKnown RBP1.39□□□□□ -2.19
CD44-234ENST00000531873 TNFAIP8L3Q5GJ75 292 aa1.39□□□□□ -2.19
CD44-234ENST00000531873 SMARCD3Q6STE5 483 aa1.39□□□□□ -2.19
CD44-234ENST00000531873 DEFB125Q8N687 156 aa1.39□□□□□ -2.19
CD44-234ENST00000531873 OR51D1Q8NGF3 324 aa1.39□□□□□ -2.19
CD44-234ENST00000531873 OR2T4Q8NH00 348 aa1.39□□□□□ -2.19
CD44-234ENST00000531873 OR11H2Q8NH07 326 aa1.39□□□□□ -2.19
CD44-234ENST00000531873 RPS4Y2Q8TD47 263 aa1.39□□□□□ -2.19
CD44-234ENST00000531873 RAB2BQ8WUD1 216 aa1.39□□□□□ -2.19
CD44-234ENST00000531873 OR51I2Q9H344 312 aa1.39□□□□□ -2.19
CD44-234ENST00000531873 CXorf21Q9HAI6 301 aa1.39□□□□□ -2.19
CD44-234ENST00000531873 CCL26Q9Y258 94 aa1.39□□□□□ -2.19
CD44-234ENST00000531873 PXMP4Q9Y6I8 212 aa1.39□□□□□ -2.19
CD44-234ENST00000531873 PHLPP1O60346 1717 aa1.39□□□□□ -2.19
CD44-234ENST00000531873 TARBP1Q13395 1621 aaKnown RBP1.39□□□□□ -2.19
CD44-234ENST00000531873 EFCAB5A4FU69 1503 aa1.39□□□□□ -2.19
CD44-234ENST00000531873 EHBP1L1Q8N3D4 1523 aa1.39□□□□□ -2.19
CD44-234ENST00000531873 SETD5Q9C0A6 1442 aa1.39□□□□□ -2.19
CD44-234ENST00000531873 TTC21AQ8NDW8 1320 aa1.39□□□□□ -2.19
CD44-234ENST00000531873 ABCA8O94911 1581 aa1.38□□□□□ -2.19
CD44-234ENST00000531873 ASH1LQ9NR48 2969 aaKnown RBP1.38□□□□□ -2.19
CD44-234ENST00000531873 A2ML1A8K2U0 1454 aa1.38□□□□□ -2.19
CD44-234ENST00000531873 ATP10BO94823 1461 aa1.38□□□□□ -2.19
CD44-234ENST00000531873 CAMSAP2Q08AD1 1489 aa1.38□□□□□ -2.19
CD44-234ENST00000531873 ABCC12Q96J65 1359 aa1.38□□□□□ -2.19
CD44-234ENST00000531873 SZT2Q5T011 3432 aa1.38□□□□□ -2.19
CD44-234ENST00000531873 FBN3Q75N90 2809 aa1.38□□□□□ -2.19
CD44-234ENST00000531873 A0A087WUU8 490 aa1.38□□□□□ -2.19
CD44-234ENST00000531873 A0A0J9YX75 114 aa1.38□□□□□ -2.19
CD44-234ENST00000531873 A0A1W2PQL4 384 aaPredicted RBP1.38□□□□□ -2.19
CD44-234ENST00000531873 SMIM23A6NLE4 172 aa1.38□□□□□ -2.19
CD44-234ENST00000531873 A8MUN3 132 aa1.38□□□□□ -2.19
CD44-234ENST00000531873 DISC1C4P0D8 188 aa1.38□□□□□ -2.19
CD44-234ENST00000531873 INMT-MINDY4F8WBC2 141 aa1.38□□□□□ -2.19
CD44-234ENST00000531873 C3orf84H3BNL1 204 aa1.38□□□□□ -2.19
CD44-234ENST00000531873 LST1O00453 97 aa1.38□□□□□ -2.19
CD44-234ENST00000531873 KRT75O95678 551 aa1.38□□□□□ -2.19
CD44-234ENST00000531873 IGHV1-69P01742 117 aa1.38□□□□□ -2.19
CD44-234ENST00000531873 TCRBP04435 133 aa1.38□□□□□ -2.19
CD44-234ENST00000531873 GZMBP10144 247 aa1.38□□□□□ -2.19
CD44-234ENST00000531873 CPMP14384 443 aa1.38□□□□□ -2.19
CD44-234ENST00000531873 BLVRBP30043 206 aaPredicted RBP1.38□□□□□ -2.19
CD44-234ENST00000531873 CD200P41217 278 aa1.38□□□□□ -2.19
CD44-234ENST00000531873 ZNF140P52738 457 aaPredicted RBP1.38□□□□□ -2.19
CD44-234ENST00000531873 RBM11P57052 281 aaKnown RBP1.38□□□□□ -2.19
CD44-234ENST00000531873 TBPL1P62380 186 aa1.38□□□□□ -2.19
CD44-234ENST00000531873 RANP62826 216 aaKnown RBP1.38□□□□□ -2.19
CD44-234ENST00000531873 CTAG1AP78358 180 aa1.38□□□□□ -2.19
CD44-234ENST00000531873 PMAIP1Q13794 54 aa1.38□□□□□ -2.19
CD44-234ENST00000531873 BATFQ16520 125 aa1.38□□□□□ -2.19
CD44-234ENST00000531873 HIST3H3Q16695 136 aa1.38□□□□□ -2.19
CD44-234ENST00000531873 KRTAP6-3Q3LI67 103 aa1.38□□□□□ -2.19
CD44-234ENST00000531873 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.38□□□□□ -2.19
CD44-234ENST00000531873 C2orf91Q6ZV80 131 aa1.38□□□□□ -2.19
CD44-234ENST00000531873 C1orf158Q8N1D5 194 aa1.38□□□□□ -2.19
CD44-234ENST00000531873 CNEP1R1Q8N9A8 125 aa1.38□□□□□ -2.19
CD44-234ENST00000531873 SLC35B4Q969S0 331 aa1.38□□□□□ -2.19
CD44-234ENST00000531873 TMA16Q96EY4 203 aaKnown RBP1.38□□□□□ -2.19
CD44-234ENST00000531873 IMP4Q96G21 291 aaKnown RBP1.38□□□□□ -2.19
CD44-234ENST00000531873 CCDC42Q96M95 316 aa1.38□□□□□ -2.19
CD44-234ENST00000531873 MND1Q9BWT6 205 aa1.38□□□□□ -2.19
CD44-234ENST00000531873 ZNF471Q9BX82 626 aaPredicted RBP1.38□□□□□ -2.19
CD44-234ENST00000531873 TXNL4BQ9NX01 149 aaKnown RBP1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms